PGSC0003DMG400042442 (Solanum tuberosum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 PGSC0003DMG400042442 T255713_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400092871 MADS box 16 63

Links

Other MADS box family TFs
Other Solanum tuberosum TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LBD19 Arabidopsis thaliana AT2G45410 D
Sb01g041130 Sorghum bicolor Sb01g041130 I
chr3.LjT44N20.90.nd Lotus japonicus chr3.LjT44N20.90.nd I
Traes_4AS_5971FF832 Triticum aestivum Traes_4AS_5971FF832 I
Traes_4DL_A2012EA68 Triticum aestivum Traes_4DL_A2012EA68 I
Pm017935 Prunus mume Pm017935 I
cassava28659.m1 Manihot esculenta cassava28659.m1 I
cassava28672.m1 Manihot esculenta cassava28672.m1 I
Bostr.25993s0234 Boechera stricta Bostr.25993s0234 I
Cagra.0698s0022 Capsella grandiflora Cagra.0698s0022 I
Carubv10025477m.g Capsella rubella Carubv10025477m.g I
Eucgr.E01414 Eucalyptus grandis Eucgr.E01414 I
evm.TU.supercontig_18.118 Carica papaya evm.TU.supercontig_18.118 I
Gorai.004G161100 Gossypium raimondii Gorai.004G161100 I
Gorai.007G091600 Gossypium raimondii Gorai.007G091600 I
MDP0000254224 Malus domestica MDP0000254224 I
MDP0000429067 Malus domestica MDP0000429067 I
Pavir.Ia03917 Panicum virgatum Pavir.Ia03917 I
Pavir.J34872 Panicum virgatum Pavir.J34872 I
SapurV1A.0024s0780 Salix purpurea SapurV1A.0024s0780 I
SapurV1A.0024s0790 Salix purpurea SapurV1A.0024s0790 I
SapurV1A.0532s0190 Salix purpurea SapurV1A.0532s0190 I
Thhalv10001778m.g Eutrema salsugineum Thhalv10001778m.g I
PK25573.1 Cannabis sativa PK25573.1 I
AMTR_s00041p00044170 Amborella trichopoda AMTR_s00041p00044170 I
OB10G12360 Oryza brachyantha OB10G12360 I
BGIOSGA011118 Oryza indica BGIOSGA011118 I
Bo4g024610 Brassica oleracea Bo4g024610 I
Bra040312 Brassica rapa Bra040312 I
BRADI1G68170 Brachypodium distachyon BRADI1G68170 I
GLYMA03G02631 Glycine max GLYMA03G02631 I
GRMZM2G110913 Zea mays GRMZM2G110913 I
GSMUA_Achr5G11330_001 Musa acuminata GSMUA_Achr5G11330_001 I
GSMUA_AchrUn_randomG10470_001 Musa acuminata GSMUA_AchrUn_randomG10470_001 I
LPERR03G09330 Leersia perrieri LPERR03G09330 I
MLOC_55239 Hordeum vulgare MLOC_55239 I
OB03G20590 Oryza brachyantha OB03G20590 I
Sb01g024400 Sorghum bicolor Sb01g024400 I
OBART03G10450 Oryza barthii OBART03G10450 I
OGLUM03G10340 Oryza glumaepatula OGLUM03G10340 I
OLONG_001985 Oryza longistaminata OLONG_001985 I
OMERI03G09680 Oryza meridionalis OMERI03G09680 I
OPUNC03G10080 Oryza punctata OPUNC03G10080 I
ORGLA03G0100400 Oryza glaberrima ORGLA03G0100400 I
ORUFI03G10670 Oryza rufipogon ORUFI03G10670 I
OS03G0246900 Oryza sativa OS03G0246900 I
POPTR_0002s14990 Populus trichocarpa POPTR_0002s14990 I
POPTR_0014s06580 Populus trichocarpa POPTR_0014s06580 I
POPTR_0014s06590 Populus trichocarpa POPTR_0014s06590 I