Bostr.22157s0123 (Boechera stricta)
mTERF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02536 (mTERF) IPR003690 Bostr.22157s0123 T264571_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G23930
M06996_2.00 		Arabidopsis thaliana
HNYHDCMDYYDYMGCCGCCR
YGGCGGCKRHRRHKGHDRND		 Dap-seq
OMalley et al.(2016)
AT5G23930_col_a 		0.706 0.706
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.22157s0123.1.p mTERF 64 131

Links

Other mTERF family TFs
Other Boechera stricta TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT5G23930 Arabidopsis thaliana AT5G23930 D 0.706
Carubv10000909m.g Capsella rubella Carubv10000909m.g I 0.721
Cagra.0086s0019 Capsella grandiflora Cagra.0086s0019 I 0.721
Bostr.22157s0164 Boechera stricta Bostr.22157s0164 N 0.750
Thhalv10023868m.g Eutrema salsugineum Thhalv10023868m.g N 0.706
Thhalv10023457m.g Eutrema salsugineum Thhalv10023457m.g N 0.721
Thhalv10023447m.g Eutrema salsugineum Thhalv10023447m.g N 0.765
Thhalv10022427m.g Eutrema salsugineum Thhalv10022427m.g N 0.735
Carubv10020267m.g Capsella rubella Carubv10020267m.g N 0.721
Carubv10020262m.g Capsella rubella Carubv10020262m.g N 0.706
Carubv10018684m.g Capsella rubella Carubv10018684m.g N 0.706
Cagra.0043s0026 Capsella grandiflora Cagra.0043s0026 N 0.706
Cagra.0043s0023 Capsella grandiflora Cagra.0043s0023 N 0.706
Cagra.0043s0010 Capsella grandiflora Cagra.0043s0010 N 0.721
Bostr.22157s0170 Boechera stricta Bostr.22157s0170 N 0.779
Bostr.22157s0168 Boechera stricta Bostr.22157s0168 N 0.735
AT1G61960 Arabidopsis thaliana AT1G61960 N 0.750
Bostr.22157s0159 Boechera stricta Bostr.22157s0159 N 0.779
Bostr.22157s0134 Boechera stricta Bostr.22157s0134 N 0.765
Bostr.22157s0091 Boechera stricta Bostr.22157s0091 N 0.735
Bostr.18473s0264 Boechera stricta Bostr.18473s0264 N 0.750
scaffold_200349.1 Arabidopsis lyrata scaffold_200349.1 N 0.779
scaffold_200344.1 Arabidopsis lyrata scaffold_200344.1 N 0.779
scaffold_200307.1 Arabidopsis lyrata scaffold_200307.1 N 0.721
fgenesh2_kg.5__1064__AT3G46950.1 Arabidopsis lyrata fgenesh2_kg.5__1064__AT3G46950.1 N 0.735
fgenesh1_pm.C_scaffold_2000223 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000223 N 0.706
Bra013207 Brassica rapa Bra013207 N 0.706
AT1G62150 Arabidopsis thaliana AT1G62150 N 0.750
AT1G62110 Arabidopsis thaliana AT1G62110 N 0.721
AT1G62085 Arabidopsis thaliana AT1G62085 N 0.765