APRR2 (Arabidopsis thaliana)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AT4G18020 T266494_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
APRR2
M02300_2.00		 Arabidopsis thaliana
NNRNWATCNN
NNGATWNYNN		 PBM
Weirauch et al.(2014)
pTH7102		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GPRI1
M00874_2.00 		Arabidopsis thaliana
NNDATHN
NDATHNN		 PBM
Franco-Zorrilla et al.(2014)
GLK1 		0.688 0.851
For this family, TFs with SR scores > 0.661 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02300_2.00 Myb 51 101

DNA Binding Domains

Protein ID Domain From To Sequence
AT4G18020.10 Myb 298 348
AT4G18020.11 Myb 298 348
AT4G18020.1 Myb 298 348
AT4G18020.2 Myb 298 348
AT4G18020.3 Myb 298 348
AT4G18020.4 Myb 298 348
AT4G18020.5 Myb 298 348
AT4G18020.6 Myb 298 348
AT4G18020.7 Myb 298 348
AT4G18020.8 Myb 298 348
AT4G18020.9 Myb 298 348

Links

Other Myb/SANT family TFs
Other Arabidopsis thaliana TFs

103 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GPRI1 Arabidopsis thaliana AT2G20570 D 0.688
AMTR_s00058p00133630 Amborella trichopoda AMTR_s00058p00133630 I 0.668
AMTR_s00149p00035260 Amborella trichopoda AMTR_s00149p00035260 I 0.734
GLK2 Arabidopsis thaliana AT5G44190 I 0.719
Bo1g019180 Brassica oleracea Bo1g019180 I 0.863
Bo7g105690 Brassica oleracea Bo7g105690 I 0.863
Bra012623 Brassica rapa Bra012623 I 0.863
Bra013277 Brassica rapa Bra013277 I 0.863
Bra013278 Brassica rapa Bra013278 I 0.863
Bra013279 Brassica rapa Bra013279 I 0.863
GPRI1 Arabidopsis lyrata fgenesh2_kg.3__3588__AT2G20570.1 I 0.688
APRR2 Arabidopsis lyrata fgenesh2_kg.7__2503__AT4G18020.2 I 0.909
fgenesh2_kg.8__391__AT5G44190.1 Arabidopsis lyrata fgenesh2_kg.8__391__AT5G44190.1 I 0.719
GLYMA01G40900 Glycine max GLYMA01G40900 I 0.783
GLYMA05G06070 Glycine max GLYMA05G06070 I 0.752
GLYMA11G04441 Glycine max GLYMA11G04441 I 0.783
GLYMA17G16360 Glycine max GLYMA17G16360 I 0.801
GSMUA_Achr11G17740_001 Musa acuminata GSMUA_Achr11G17740_001 I 0.719
GSMUA_Achr2G18200_001 Musa acuminata GSMUA_Achr2G18200_001 I 0.682
MTR_4g098870 Medicago truncatula MTR_4g098870 I 0.800
MTR_5g014040 Medicago truncatula MTR_5g014040 I 0.767
PGSC0003DMG400024217 Solanum tuberosum PGSC0003DMG400024217 I 0.793
PGSC0003DMG400026587 Solanum tuberosum PGSC0003DMG400026587 I 0.728
POPTR_0001s02910 Populus trichocarpa POPTR_0001s02910 I 0.794
POPTR_0003s08600 Populus trichocarpa POPTR_0003s08600 I 0.788
POPTR_0007s01230 Populus trichocarpa POPTR_0007s01230 I 0.668
POPTR_0017s04720 Populus trichocarpa POPTR_0017s04720 I 0.668
PRUPE_ppa004161mg Prunus persica PRUPE_ppa004161mg I 0.890
PRUPE_ppa014599mg Prunus persica PRUPE_ppa014599mg I 0.668
SELMODRAFT_428906 Selaginella moellendorffii SELMODRAFT_428906 I 0.795
Solyc06g061030.2 Solanum lycopersicum Solyc06g061030.2 I 0.728
Solyc08g077230.2 Solanum lycopersicum Solyc08g077230.2 I 0.793
TCM_008193 Theobroma cacao TCM_008193 I 0.668
TCM_015780 Theobroma cacao TCM_015780 I 0.842
APRR2 Vitis vinifera VIT_02s0012g00570 I 0.844
Ca_02285 Cicer arietinum Ca_02285 I 0.801
Ca_12825 Cicer arietinum Ca_12825 I 0.793
Ca_24009 Cicer arietinum Ca_24009 I 0.734
Cla003791 Citrullus lanatus Cla003791 I 0.688
Cla008926 Citrullus lanatus Cla008926 I 0.857
Cla016403 Citrullus lanatus Cla016403 I 0.727
Pm014123 Prunus mume Pm014123 I 0.668
Pm014733 Prunus mume Pm014733 I 0.890
29983.m003131 Ricinus communis 29983.m003131 I 0.668
30054.m000786 Ricinus communis 30054.m000786 I 0.880
cassava2466.valid.m1 Manihot esculenta cassava2466.valid.m1 I 0.838
cassava42047.valid.m1 Manihot esculenta cassava42047.valid.m1 I 0.775
cassava42048.valid.m1 Manihot esculenta cassava42048.valid.m1 I 0.775
cassava43649.valid.m1 Manihot esculenta cassava43649.valid.m1 I 0.668
cassava43650.valid.m1 Manihot esculenta cassava43650.valid.m1 I 0.668
Cucsa.087530 Cucumis sativus Cucsa.087530 I 0.688
Cucsa.313480 Cucumis sativus Cucsa.313480 I 0.714
Cucsa.321580 Cucumis sativus Cucsa.321580 I 0.857
mgf007181m Mimulus guttatus mgf007181m I 0.686
mgf012846m Mimulus guttatus mgf012846m I 0.686
Aquca_044_00072 Aquilegia coerulea Aquca_044_00072 I 0.834
Bostr.30275s0270 Boechera stricta Bostr.30275s0270 I 0.863
Bostr.3148s0040 Boechera stricta Bostr.3148s0040 I 0.719
Bostr.7903s0106 Boechera stricta Bostr.7903s0106 I 0.688
Cagra.0381s0008 Capsella grandiflora Cagra.0381s0008 I 0.719
Cagra.1595s0002 Capsella grandiflora Cagra.1595s0002 I 0.808
Cagra.2516s0014 Capsella grandiflora Cagra.2516s0014 I 0.688
Carubv10004540m.g Capsella rubella Carubv10004540m.g I 0.808
Carubv10014114m.g Capsella rubella Carubv10014114m.g I 0.688
Carubv10026528m.g Capsella rubella Carubv10026528m.g I 0.719
Ciclev10015266m.g Citrus clementina Ciclev10015266m.g I 0.668
Ciclev10031120m.g Citrus clementina Ciclev10031120m.g I 0.890
Eucgr.E00308 Eucalyptus grandis Eucgr.E00308 I 0.882
Eucgr.K01056 Eucalyptus grandis Eucgr.K01056 I 0.715
evm.TU.supercontig_6.428 Carica papaya evm.TU.supercontig_6.428 I 0.830
gene10484-v1.0-hybrid Fragaria vesca gene10484-v1.0-hybrid I 0.890
gene17750-v1.0-hybrid Fragaria vesca gene17750-v1.0-hybrid I 0.668
Gorai.002G020300 Gossypium raimondii Gorai.002G020300 I 0.668
Gorai.003G180100 Gossypium raimondii Gorai.003G180100 I 0.762
Gorai.004G188300 Gossypium raimondii Gorai.004G188300 I 0.767
Gorai.008G228800 Gossypium raimondii Gorai.008G228800 I 0.801
Gorai.012G126600 Gossypium raimondii Gorai.012G126600 I 0.668
Lus10003013.g Linum usitatissimum Lus10003013.g I 0.784
Lus10011044.g Linum usitatissimum Lus10011044.g I 0.838
Lus10018649.g Linum usitatissimum Lus10018649.g I 0.688
Lus10030938.g Linum usitatissimum Lus10030938.g I 0.723
Lus10033642.g Linum usitatissimum Lus10033642.g I 0.688
Lus10039883.g Linum usitatissimum Lus10039883.g I 0.688
Lus10040109.g Linum usitatissimum Lus10040109.g I 0.818
MDP0000225179 Malus domestica MDP0000225179 I 0.668
MDP0000237396 Malus domestica MDP0000237396 I 0.876
MDP0000248863 Malus domestica MDP0000248863 I 0.827
MDP0000526864 Malus domestica MDP0000526864 I 0.668
orange1.1g008254m.g Citrus sinensis orange1.1g008254m.g I 0.890
orange1.1g013528m.g Citrus sinensis orange1.1g013528m.g I 0.668
SapurV1A.0118s0260 Salix purpurea SapurV1A.0118s0260 I 0.668
SapurV1A.0132s0010 Salix purpurea SapurV1A.0132s0010 I 0.812
SapurV1A.0693s0070 Salix purpurea SapurV1A.0693s0070 I 0.668
SapurV1A.1296s0050 Salix purpurea SapurV1A.1296s0050 I 0.830
SapurV1A.1950s0030 Salix purpurea SapurV1A.1950s0030 I 0.668
Thhalv10003223m.g Eutrema salsugineum Thhalv10003223m.g I 0.719
Thhalv10024919m.g Eutrema salsugineum Thhalv10024919m.g I 0.863
PK19826.1 Cannabis sativa PK19826.1 I 0.890
PK27491.1 Cannabis sativa PK27491.1 I 0.668
chr2.CM0021.770.nc Lotus japonicus chr2.CM0021.770.nc I 0.783
chr4.CM0831.100.nd Lotus japonicus chr4.CM0831.100.nd I 0.793
PDK_20s1585631g001 Phoenix dactylifera PDK_20s1585631g001 I 0.824