GSMUA_Achr3G28230_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_Achr3G28230_001 T272412_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.737 0.828
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.733 0.839
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.733 0.817
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.733 0.817
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.733 0.828
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.733 0.828
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.733 0.828
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.717 0.817
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.711 0.806
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.711 0.806
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.711 0.806
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.711 0.806
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.711 0.806
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr3P28230_001 Myb 5 51
GSMUA_Achr3P28230_001 Myb 57 102

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

309 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
maker-pir_contig_2201-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_2201-fgenesh-gene-0.0 N
e_gw1.34.32.1 Phytophthora capsici e_gw1.34.32.1 N
e_gw1.2.501.1 Phytophthora capsici e_gw1.2.501.1 N
PYU1_G008757 Pythium ultimum PYU1_G008757 N
PYU1_G008755 Pythium ultimum PYU1_G008755 N
Physo128916 Phytophthora sojae Physo128916 N
Phyra76424 Phytophthora ramorum Phyra76424 N
Phyra76423 Phytophthora ramorum Phyra76423 N
maker-pir_contig_723-fgenesh-gene-0.2 Pythium irregulare maker-pir_contig_723-fgenesh-gene-0.2 N
F443_10160 Phytophthora parasitica F443_10160 N
fgenesh_scip_prom.46568.9634 Phytophthora kernoviae fgenesh_scip_prom.46568.9634 N
fgenesh_scip_prom.46568.9633 Phytophthora kernoviae fgenesh_scip_prom.46568.9633 N
fgenesh_scip_prom.46568.6498 Phytophthora kernoviae fgenesh_scip_prom.46568.6498 N
fgenesh_scip_prom.28083.9723 Phytophthora lateralis fgenesh_scip_prom.28083.9723 N
fgenesh_scip_prom.28083.660 Phytophthora lateralis fgenesh_scip_prom.28083.660 N
fgenesh_scip_prom.28083.659 Phytophthora lateralis fgenesh_scip_prom.28083.659 N
F443_10169 Phytophthora parasitica F443_10169 N