VDAG_10253 (Verticillium dahliae)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 VDAG_10253 T281832_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CDC5
M02698_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 SELEX
Mathelier et al.(2014)
MA0579.1 		0.706 0.804
CDC5
M11037_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 Transfac
Matys et al.(2006)
P$CDC5_01 		0.706 0.804
CDC5L
M11049_2.00 		Homo sapiens
GWKTTAAYRTAD
HTAYRTTAAMWC		 Transfac
Matys et al.(2006)
V$CDC5_01 		0.698 0.772
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EGY20624 Myb 6 52
EGY20624 Myb 58 102

Links

Other Myb/SANT family TFs
Other Verticillium dahliae TFs

528 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GATA24 Arabidopsis thaliana AT3G21175 D
GATA28 Arabidopsis thaliana AT1G51600 D
ZIM Arabidopsis thaliana AT4G24470 D
OS06G0698900 Oryza sativa OS06G0698900 D
BGIOSGA007539 Oryza indica BGIOSGA007539 I
BGIOSGA020596 Oryza indica BGIOSGA020596 I
Bo1g039000 Brassica oleracea Bo1g039000 I
Bo1g108240 Brassica oleracea Bo1g108240 I
Bo3g181450 Brassica oleracea Bo3g181450 I
Bo5g103560 Brassica oleracea Bo5g103560 I
Bra013805 Brassica rapa Bra013805 I
Bra014292 Brassica rapa Bra014292 I
Bra023900 Brassica rapa Bra023900 I
Bra031258 Brassica rapa Bra031258 I
BRADI1G33980 Brachypodium distachyon BRADI1G33980 I
F775_08559 Aegilops tauschii F775_08559 I
ZML1 Arabidopsis lyrata fgenesh2_kg.3__2338__AT3G21175.1 I
TIFY1 Arabidopsis lyrata fgenesh2_kg.7__1832__AT4G24470.2 I
GLYMA08G23720 Glycine max GLYMA08G23720 I
GRMZM2G058479 Zea mays GRMZM2G058479 I
GRMZM2G080509 Zea mays GRMZM2G080509 I
GSMUA_Achr10G06260_001 Musa acuminata GSMUA_Achr10G06260_001 I
GSMUA_Achr2G04520_001 Musa acuminata GSMUA_Achr2G04520_001 I
GSMUA_Achr3G05620_001 Musa acuminata GSMUA_Achr3G05620_001 I
GSMUA_Achr7G08720_001 Musa acuminata GSMUA_Achr7G08720_001 I
GSMUA_Achr9G13870_001 Musa acuminata GSMUA_Achr9G13870_001 I
LPERR02G03330 Leersia perrieri LPERR02G03330 I
LPERR06G21800 Leersia perrieri LPERR06G21800 I
LPERR11G14110 Leersia perrieri LPERR11G14110 I
MLOC_17061 Hordeum vulgare MLOC_17061 I
MLOC_3107 Hordeum vulgare MLOC_3107 I
MTR_3g100050 Medicago truncatula MTR_3g100050 I
OB02G13220 Oryza brachyantha OB02G13220 I
OB06G33840 Oryza brachyantha OB06G33840 I
OBART02G03780 Oryza barthii OBART02G03780 I
OBART06G26250 Oryza barthii OBART06G26250 I
OGLUM02G03560 Oryza glumaepatula OGLUM02G03560 I
OGLUM06G27650 Oryza glumaepatula OGLUM06G27650 I
OLONG_015069 Oryza longistaminata OLONG_015069 I
OMERI02G04610 Oryza meridionalis OMERI02G04610 I
OMERI06G26410 Oryza meridionalis OMERI06G26410 I
ONIVA02G03810 Oryza nivara ONIVA02G03810 I
ONIVA06G28780 Oryza nivara ONIVA06G28780 I
OPUNC02G02970 Oryza punctata OPUNC02G02970 I
OPUNC06G23830 Oryza punctata OPUNC06G23830 I
ORGLA02G0035000 Oryza glaberrima ORGLA02G0035000 I
ORGLA06G0219100 Oryza glaberrima ORGLA06G0219100 I
ORUFI02G03830 Oryza rufipogon ORUFI02G03830 I
ORUFI06G28170 Oryza rufipogon ORUFI06G28170 I
GATA17 Oryza sativa OS02G0148500 I
POPTR_0007s03130 Populus trichocarpa POPTR_0007s03130 I
POPTR_0010s25810 Populus trichocarpa POPTR_0010s25810 I
POPTR_0017s06980 Populus trichocarpa POPTR_0017s06980 I
PRUPE_ppa009401mg Prunus persica PRUPE_ppa009401mg I
PRUPE_ppa009709mg Prunus persica PRUPE_ppa009709mg I
Sb10g028750 Sorghum bicolor Sb10g028750 I
ZML2 Arabidopsis lyrata scaffold_104929.1 I
SELMODRAFT_177195 Selaginella moellendorffii SELMODRAFT_177195 I
SELMODRAFT_423855 Selaginella moellendorffii SELMODRAFT_423855 I
Si006750m.g Setaria italica Si006750m.g I
TCM_007360 Theobroma cacao TCM_007360 I
TCM_027858 Theobroma cacao TCM_027858 I
Traes_6AS_4106E8E28 Triticum aestivum Traes_6AS_4106E8E28 I
Traes_6BS_AB5909D02 Triticum aestivum Traes_6BS_AB5909D02 I
Traes_6DS_6268D31AE Triticum aestivum Traes_6DS_6268D31AE I
Traes_7AL_EA6F4FFDE Triticum aestivum Traes_7AL_EA6F4FFDE I
Traes_7DL_A5ECEDA95 Triticum aestivum Traes_7DL_A5ECEDA95 I
TRIUR3_11107 Triticum urartu TRIUR3_11107 I
TRIUR3_32095 Triticum urartu TRIUR3_32095 I
VIT_09s0054g00440 Vitis vinifera VIT_09s0054g00440 I
Ca_01471 Cicer arietinum Ca_01471 I
Ca_17522 Cicer arietinum Ca_17522 I
Cla013127 Citrullus lanatus Cla013127 I
Cla015736 Citrullus lanatus Cla015736 I
Pm013048 Prunus mume Pm013048 I
Pm022163 Prunus mume Pm022163 I
29838.m001724 Ricinus communis 29838.m001724 I
cassava12169.valid.m1 Manihot esculenta cassava12169.valid.m1 I
cassava6876.valid.m1 Manihot esculenta cassava6876.valid.m1 I
Cucsa.218190 Cucumis sativus Cucsa.218190 I
Cucsa.359570 Cucumis sativus Cucsa.359570 I
e_gw1.226.30.1 Physcomitrella patens e_gw1.226.30.1 I
fgenesh1_pm.scaffold_69000012 Physcomitrella patens fgenesh1_pm.scaffold_69000012 I
fgenesh2_pm.scaffold_111000001 Physcomitrella patens fgenesh2_pm.scaffold_111000001 I
gw1.68.123.1 Physcomitrella patens gw1.68.123.1 I
mgf016112m Mimulus guttatus mgf016112m I
Aquca_007_00522 Aquilegia coerulea Aquca_007_00522 I
Aquca_010_00250 Aquilegia coerulea Aquca_010_00250 I
Aquca_018_00034 Aquilegia coerulea Aquca_018_00034 I
Bostr.26675s0048 Boechera stricta Bostr.26675s0048 I
Bostr.7867s0254 Boechera stricta Bostr.7867s0254 I
Cagra.1757s0004 Capsella grandiflora Cagra.1757s0004 I
Cagra.2171s0014 Capsella grandiflora Cagra.2171s0014 I
Cagra.2346s0015 Capsella grandiflora Cagra.2346s0015 I
Carubv10006355m.g Capsella rubella Carubv10006355m.g I
Carubv10009866m.g Capsella rubella Carubv10009866m.g I
Carubv10016131m.g Capsella rubella Carubv10016131m.g I
Ciclev10027306m.g Citrus clementina Ciclev10027306m.g I
Eucgr.J03166 Eucalyptus grandis Eucgr.J03166 I
evm.TU.supercontig_155.28 Carica papaya evm.TU.supercontig_155.28 I
Gorai.008G017800 Gossypium raimondii Gorai.008G017800 I
orange1.1g022728m.g Citrus sinensis orange1.1g022728m.g I
Pavir.Da00166 Panicum virgatum Pavir.Da00166 I
Pavir.Db00254 Panicum virgatum Pavir.Db00254 I
SapurV1A.0036s1170 Salix purpurea SapurV1A.0036s1170 I
SapurV1A.0187s0150 Salix purpurea SapurV1A.0187s0150 I
Thhalv10011695m.g Eutrema salsugineum Thhalv10011695m.g I
Thhalv10020970m.g Eutrema salsugineum Thhalv10020970m.g I
Thhalv10025795m.g Eutrema salsugineum Thhalv10025795m.g I
LjSGA_067759.1 Lotus japonicus LjSGA_067759.1 I
PDK_20s1340921g001 Phoenix dactylifera PDK_20s1340921g001 I
PDK_20s1879741g001 Phoenix dactylifera PDK_20s1879741g001 I