L893_g9517 (Steinernema glaseri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L893_g9517 T309409_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-86
M02415_2.00 		Caenorhabditis elegans
KTGTAGTC
GACTACAM		 PBM
Weirauch et al.(2014)
pTH8598 		0.859 0.543
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L893_g9517.t1 Nuclear receptor 3 72

Links

Other Nuclear receptor family TFs
Other Steinernema glaseri TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-86 Caenorhabditis elegans WBGene00003676 D 0.859
L892_g8145 Steinernema scapterisci L892_g8145 I 0.954
BXY_0973100 Bursaphelenchus xylophilus BXY_0973100 I 0.745
EVEC_0001095701 Enterobius vermicularis EVEC_0001095701 I 0.802
EVEC_0001266201 Enterobius vermicularis EVEC_0001266201 I 0.919
L596_g27786 Steinernema carpocapsae L596_g27786 I 0.885
L596_g9106 Steinernema carpocapsae L596_g9106 I 0.861
L889_g10781 Steinernema feltiae L889_g10781 I 0.826
L889_g9698 Steinernema feltiae L889_g9698 I 0.946
L889_g987 Steinernema feltiae L889_g987 I 0.946
L892_g10708 Steinernema scapterisci L892_g10708 I 0.859
L892_g8140 Steinernema scapterisci L892_g8140 I 0.987
L892_g8144 Steinernema scapterisci L892_g8144 I 0.872
CBG12152 Caenorhabditis briggsae CBG12152 I 0.899
L893_g2090 Steinernema glaseri L893_g2090 I 0.849
L893_g4569 Steinernema glaseri L893_g4569 I 0.954
L898_g10723 Steinernema monticolum L898_g10723 I 0.986
L898_g28806 Steinernema monticolum L898_g28806 I 0.878
NECAME_01500 Necator americanus NECAME_01500 I 0.860
scaffold1235-EXSNAP2012.2 Pristionchus exspectatus scaffold1235-EXSNAP2012.2 I 0.787
scaffold183-EXSNAP2012.18 Pristionchus exspectatus scaffold183-EXSNAP2012.18 I 0.848
scaffold260-EXSNAP2012.15 Pristionchus exspectatus scaffold260-EXSNAP2012.15 I 0.848
SMUV_0000801801 Syphacia muris SMUV_0000801801 I 0.959
SMUV_0000886001 Syphacia muris SMUV_0000886001 I 0.930
SMUV_0000909301 Syphacia muris SMUV_0000909301 I 0.800
CRE17354 Caenorhabditis remanei CRE17354 I 0.785
CBG03687 Caenorhabditis briggsae CBG03687 I 0.746
CBG16375 Caenorhabditis briggsae CBG16375 I 0.887
CBG20699 Caenorhabditis briggsae CBG20699 I 0.754
CBN03440 Caenorhabditis brenneri CBN03440 I 0.763
CBN03769 Caenorhabditis brenneri CBN03769 I 0.878
CBN04619 Caenorhabditis brenneri CBN04619 I 0.876
CBN16902 Caenorhabditis brenneri CBN16902 I 0.763
CBN24070 Caenorhabditis brenneri CBN24070 I 0.818
CJA04414 Caenorhabditis japonica CJA04414 I 0.832
CJA07390 Caenorhabditis japonica CJA07390 I 0.832
CJA10576 Caenorhabditis japonica CJA10576 I 0.885
CRE17310 Caenorhabditis remanei CRE17310 I 0.777
CRE18529 Caenorhabditis remanei CRE18529 I 0.900
CRE27659 Caenorhabditis remanei CRE27659 I 0.886
PPA08785 Pristionchus pacificus PPA08785 I 0.848
PPA10478 Pristionchus pacificus PPA10478 I 0.848
PPA29361 Pristionchus pacificus PPA29361 I 0.755
nhr-12 Caenorhabditis elegans WBGene00003611 I 0.758
nhr-28 Caenorhabditis elegans WBGene00003624 I 0.886
nhr-109 Caenorhabditis elegans WBGene00003699 I 0.886
nhr-273 Caenorhabditis elegans WBGene00020460 I 0.856
BXY_0777500 Bursaphelenchus xylophilus BXY_0777500 N 0.864
BXY_1598800 Bursaphelenchus xylophilus BXY_1598800 N 0.757
ACAC_0000388601 Angiostrongylus cantonensis ACAC_0000388601 N 0.783