CpipJ_CPIJ019376 (Culex pipiens)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00554 (RHD_DNA_bind) IPR011539 CpipJ_CPIJ019376 T316960_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
dl
M02712_2.00 		Drosophila melanogaster
SGGGKTTTTYCV
BGRAAAAMCCCS		 SELEX
Mathelier et al.(2014)
MA0022.1 		0.734 0.734
dl
M02713_2.00 		Drosophila melanogaster
GGGGWWTTCC
GGAAWWCCCC		 SELEX
Mathelier et al.(2014)
MA0023.1 		0.734 0.734
dl
M09691_2.00 		Drosophila melanogaster
BRGRWTTYCCM
KGGRAAWYCYV		 Misc
Kulakovskiy et al.(2009)
dl 		0.734 0.734
dl
M11243_2.00 		Drosophila melanogaster
GGGTTTTTCCV
BGGAAAAACCC		 Transfac
Matys et al.(2006)
I$DL_01 		0.734 0.734
dl
M11244_2.00 		Drosophila melanogaster
BRDTTTTCYSD
HSRGAAAAHYV		 Transfac
Matys et al.(2006)
I$DL_02 		0.734 0.734
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ019376-RA Rel 10 180

Links

Other Rel family TFs
Other Culex pipiens TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LBD16 Arabidopsis thaliana AT2G42430 D
Ciclev10024416m.g Citrus clementina Ciclev10024416m.g I
TCM_004106 Theobroma cacao TCM_004106 I
Carubv10025548m.g Capsella rubella Carubv10025548m.g I
Carubv10015417m.g Capsella rubella Carubv10015417m.g I
Cagra.2636s0029 Capsella grandiflora Cagra.2636s0029 I
Cagra.2098s0013 Capsella grandiflora Cagra.2098s0013 I
Bostr.19046s0098 Boechera stricta Bostr.19046s0098 I
Aquca_034_00401 Aquilegia coerulea Aquca_034_00401 I
Aquca_017_00693 Aquilegia coerulea Aquca_017_00693 I
Aquca_017_00683 Aquilegia coerulea Aquca_017_00683 I
Aquca_013_00578 Aquilegia coerulea Aquca_013_00578 I
mgf026090m Mimulus guttatus mgf026090m I
mgf020773m Mimulus guttatus mgf020773m I
gw1.261.12.1 Physcomitrella patens gw1.261.12.1 I
Cucsa.053440 Cucumis sativus Cucsa.053440 I
cassava15612.m1 Manihot esculenta cassava15612.m1 I
29883.m002035 Ricinus communis 29883.m002035 I
Pm020629 Prunus mume Pm020629 I
Cla006088 Citrullus lanatus Cla006088 I
LBD16 Vitis vinifera VIT_07s0005g03030 I
TRIUR3_01477 Triticum urartu TRIUR3_01477 I
Traes_6DL_850266B2A Triticum aestivum Traes_6DL_850266B2A I
Traes_6AL_D6045E37C Triticum aestivum Traes_6AL_D6045E37C I
Traes_4DS_11C3B0459 Triticum aestivum Traes_4DS_11C3B0459 I
PDK_20s1428661g002 Phoenix dactylifera PDK_20s1428661g002 I
orange1.1g040761m.g Citrus sinensis orange1.1g040761m.g I
AMTR_s00041p00044170 Amborella trichopoda AMTR_s00041p00044170 I
PK23185.1 Cannabis sativa PK23185.1 I
SapurV1A.0532s0190 Salix purpurea SapurV1A.0532s0190 I
SapurV1A.0378s0180 Salix purpurea SapurV1A.0378s0180 I
SapurV1A.0024s0780 Salix purpurea SapurV1A.0024s0780 I
SapurV1A.0006s0980 Salix purpurea SapurV1A.0006s0980 I
Pavir.J39638 Panicum virgatum Pavir.J39638 I
Pavir.J24246 Panicum virgatum Pavir.J24246 I
Pavir.J03376 Panicum virgatum Pavir.J03376 I
Pavir.Ia03917 Panicum virgatum Pavir.Ia03917 I
Pavir.Aa00097 Panicum virgatum Pavir.Aa00097 I
Eucgr.B01529 Eucalyptus grandis Eucgr.B01529 I
MDP0000145761 Malus domestica MDP0000145761 I
MDP0000131964 Malus domestica MDP0000131964 I
Lus10033872.g Linum usitatissimum Lus10033872.g I
Lus10024877.g Linum usitatissimum Lus10024877.g I
Gorai.007G144400 Gossypium raimondii Gorai.007G144400 I
Gorai.004G219900 Gossypium raimondii Gorai.004G219900 I
Gorai.004G073400 Gossypium raimondii Gorai.004G073400 I
Gorai.001G251600 Gossypium raimondii Gorai.001G251600 I
gene08250-v1.0-hybrid Fragaria vesca gene08250-v1.0-hybrid I
evm.TU.supercontig_50.43 Carica papaya evm.TU.supercontig_50.43 I
Eucgr.K03284 Eucalyptus grandis Eucgr.K03284 I
GRMZM2G075499 Zea mays GRMZM2G075499 I
Solyc09g066260.2 Solanum lycopersicum Solyc09g066260.2 I
LPERR03G03460 Leersia perrieri LPERR03G03460 I
LPERR02G31040 Leersia perrieri LPERR02G31040 I
GSMUA_AchrUn_randomG10470_001 Musa acuminata GSMUA_AchrUn_randomG10470_001 I
GSMUA_AchrUn_randomG07730_001 Musa acuminata GSMUA_AchrUn_randomG07730_001 I
GSMUA_Achr8G14330_001 Musa acuminata GSMUA_Achr8G14330_001 I
GSMUA_Achr5G13230_001 Musa acuminata GSMUA_Achr5G13230_001 I
GSMUA_Achr4G25190_001 Musa acuminata GSMUA_Achr4G25190_001 I
GSMUA_Achr3G27340_001 Musa acuminata GSMUA_Achr3G27340_001 I
GSMUA_Achr1G01350_001 Musa acuminata GSMUA_Achr1G01350_001 I
GRMZM2G092483 Zea mays GRMZM2G092483 I
LPERR08G20530 Leersia perrieri LPERR08G20530 I
GLYMA19G34600 Glycine max GLYMA19G34600 I
GLYMA19G34590 Glycine max GLYMA19G34590 I
GLYMA10G04050 Glycine max GLYMA10G04050 I
GLYMA03G31830 Glycine max GLYMA03G31830 I
LBD20 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000301 I
F775_22967 Aegilops tauschii F775_22967 I
BRADI3G55680 Brachypodium distachyon BRADI3G55680 I
Bra016877 Brassica rapa Bra016877 I
Bo8g092560 Brassica oleracea Bo8g092560 I
BGIOSGA005344 Oryza indica BGIOSGA005344 I
LBD20 Arabidopsis thaliana AT3G03760 I
PGSC0003DMG400020069 Solanum tuberosum PGSC0003DMG400020069 I
Solyc06g083930.1 Solanum lycopersicum Solyc06g083930.1 I
Solyc01g098220.1 Solanum lycopersicum Solyc01g098220.1 I
Si037727m.g Setaria italica Si037727m.g I
Si019578m.g Setaria italica Si019578m.g I
Si015156m.g Setaria italica Si015156m.g I
Sb04g037550 Sorghum bicolor Sb04g037550 I
PRUPE_ppa025349mg Prunus persica PRUPE_ppa025349mg I
POPTR_0047s00280 Populus trichocarpa POPTR_0047s00280 I
POPTR_0005s24320 Populus trichocarpa POPTR_0005s24320 I
POPTR_0002s04210 Populus trichocarpa POPTR_0002s04210 I
MLOC_61947 Hordeum vulgare MLOC_61947 I
PGSC0003DMG400009713 Solanum tuberosum PGSC0003DMG400009713 I
OS02G0820500 Oryza sativa OS02G0820500 I
ORUFI02G39110 Oryza rufipogon ORUFI02G39110 I
ORGLA02G0327800 Oryza glaberrima ORGLA02G0327800 I
OPUNC02G34750 Oryza punctata OPUNC02G34750 I
ONIVA02G40360 Oryza nivara ONIVA02G40360 I
OMERI02G35350 Oryza meridionalis OMERI02G35350 I
OGLUM02G38740 Oryza glumaepatula OGLUM02G38740 I
OB10G12360 Oryza brachyantha OB10G12360 I
OB02G44330 Oryza brachyantha OB02G44330 I
OLONG_009479 Oryza longistaminata OLONG_009479 N
Bra016876 Brassica rapa Bra016876 N