ENSP00000388910-D1 (Bos grunniens)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00554 (RHD_DNA_bind) IPR011539 ENSP00000388910-D1 T317778_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFATC4
M01306_2.00 		Homo sapiens
NNNWWWVYRN
NYRBWWWNNN		 PBM
Lambert et al.(2019)
pTH9347 		0.986 0.986
NFATC4
M05701_2.00 		Homo sapiens
DBTTTCCRYN
NRYGGAAAVH		 SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_1 		0.986 0.986
NFATC4
M05702_2.00 		Homo sapiens
NKTTCCATGGAAMV
BKTTCCATGGAAMN		 SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_2 		0.986 0.986
NFATC4
M09345_2.00 		Homo sapiens
HNDBTTTCCN
NGGAAAVHND		 Misc
Kulakovskiy et al.(2013)
NFAC4_HUMAN.H11MO.0.C 		0.986 0.986
Nfatc4
M09354_2.00 		Mus musculus
HNDBTTTCCN
NGGAAAVHND		 Misc
Kulakovskiy et al.(2013)
NFAC4_MOUSE.H11MO.0.C 		0.986 0.986
NFATC4
M11219_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT3_Q3_01 		0.986 0.986
NFATC4
M11220_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT3_Q3 		0.986 0.986
NFATC4
M05703_2.00 		Homo sapiens
DNTTTCCRYN
NRYGGAAANH		 SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_1 		0.986 0.986
NFATC4
M05704_2.00 		Homo sapiens
NKTTCCRYGGAAMN
NKTTCCRYGGAAMN		 SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_2 		0.986 0.986
Nfatc3
M09359_2.00 		Mus musculus
RDTTTTCCA
TGGAAAAHY		 Misc
Kulakovskiy et al.(2013)
NFAC3_MOUSE.H11MO.0.B 		0.867 0.867
NFATC3
M02440_2.00 		Homo sapiens
DNTTTCCRNN
NNYGGAAANH		 PBM
Weirauch et al.(2014)
pTH9192 		0.860 0.860
NFATC3
M05693_2.00 		Homo sapiens
WNTTTCCRYN
NRYGGAAANW		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_1 		0.860 0.860
NFATC3
M05694_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_2 		0.860 0.860
NFATC3
M05695_2.00 		Homo sapiens
DYGGAAANNNNNNNTTTCCRH
DYGGAAANNNNNNNTTTCCRH		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_3 		0.860 0.860
NFATC3
M09343_2.00 		Homo sapiens
RDTTTTCCA
TGGAAAAHY		 Misc
Kulakovskiy et al.(2013)
NFAC3_HUMAN.H11MO.0.B 		0.860 0.860
NFATC3
M11217_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT4_Q3 		0.860 0.860
NFATC3
M11218_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT4_Q5 		0.860 0.860
NFATC3
M05696_2.00 		Homo sapiens
WNTTTCCRYN
NRYGGAAANW		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_1 		0.860 0.860
NFATC3
M05697_2.00 		Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_2 		0.860 0.860
NFATC3
M05698_2.00 		Homo sapiens
RYGGAAANHNNNDNTTTCCRY
RYGGAAANHNNNDNTTTCCRY		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_3 		0.860 0.860
NFATC2
M02441_2.00 		Homo sapiens
WNTTTCCRHN
NDYGGAAANW		 PBM
Weirauch et al.(2014)
pTH9196 		0.818 0.818
NFATC2
M05705_2.00 		Homo sapiens
DTTTCCATGGAAAM
KTTTCCATGGAAAH		 SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_1 		0.818 0.818
NFATC2
M05706_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_2 		0.818 0.818
NFATC2
M09346_2.00 		Homo sapiens
NWTTTTCCW
WGGAAAAWN		 Misc
Kulakovskiy et al.(2013)
NFAC2_HUMAN.H11MO.0.B 		0.818 0.818
Nfatc2
M09357_2.00 		Mus musculus
NWTTTTCCW
WGGAAAAWN		 Misc
Kulakovskiy et al.(2013)
NFAC2_MOUSE.H11MO.0.C 		0.818 0.818
NFATC2
M11221_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q4 		0.818 0.818
NFATC2
M11222_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q5 		0.818 0.818
NFATC2
M11223_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q6 		0.818 0.818
NFATC2
M08462_2.00 		Homo sapiens
TTTTCCA
TGGAAAA		 COMPILED
Mathelier et al.(2014)
MA0152.1 		0.818 0.818
NFATC2
M05707_2.00 		Homo sapiens
NTTTCCGCGGAAAN
NTTTCCGCGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_1 		0.818 0.818
NFATC2
M05708_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_2 		0.818 0.818
NFATC1
M02443_2.00 		Meleagris gallopavo
NNTTTCCRNN
NNYGGAAANN		 PBM
Weirauch et al.(2014)
pTH8315 		0.811 0.811
Nfatc1
M09360_2.00 		Mus musculus
KABTCANWBTTTCCW
WGGAAAVWNTGAVTM		 Misc
Kulakovskiy et al.(2013)
NFAC1_MOUSE.H11MO.0.A 		0.811 0.811
NFATC1
M02444_2.00 		Monodelphis domestica
NNDTTCCDNN
NNHGGAAHNN		 PBM
Weirauch et al.(2014)
pTH8401 		0.804 0.804
nfatc1
M02446_2.00 		Xenopus tropicalis
NNTTTCCRNN
NNYGGAAANN		 PBM
Weirauch et al.(2014)
pTH8557 		0.797 0.797
NFATC1
M03449_2.00 		Homo sapiens
HKGRAAADDNWBTTTCCAYN
NRTGGAAAVWNHHTTTYCMD		 SELEX
Jolma et al.(2013)
NFATC1_1 		0.797 0.797
NFATC1
M03450_2.00 		Homo sapiens
TTTCCAYWRYGGAAA
TTTCCRYWRTGGAAA		 SELEX
Jolma et al.(2013)
NFATC1_2 		0.797 0.797
NFATC1
M03451_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Jolma et al.(2013)
NFATC1_3 		0.797 0.797
NFATC1
M02747_2.00 		Homo sapiens
DTTCCRYGGAA
TTCCRYGGAAH		 SELEX
Jolma et al.(2010)
NFATc1_dimer 		0.797 0.797
NFATC1
M02748_2.00 		Homo sapiens
GGAANDTTCC
GGAAHNTTCC		 SELEX
Jolma et al.(2010)
NFATc1_dimer_type2 		0.797 0.797
NFATC1
M02749_2.00 		Homo sapiens
WDTTTCCAY
RTGGAAAHW		 SELEX
Jolma et al.(2010)
NFATc1_monomer 		0.797 0.797
NFATC1
M05711_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_1 		0.797 0.797
NFATC1
M05712_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_2 		0.797 0.797
NFATC1
M09349_2.00 		Homo sapiens
HBYHWBWBTTTCCWB
VWGGAAAVWVWDRVD		 Misc
Kulakovskiy et al.(2013)
NFAC1_HUMAN.H11MO.0.B 		0.797 0.797
NFATC1
M09625_2.00 		Homo sapiens
WBTTTCCAYY
RRTGGAAAVW		 Misc
Heinz et al.(2010)
Jurkat-NFATC1_Jolma_et_al. 		0.797 0.797
NFATC1
M11232_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q4 		0.797 0.797
NFATC1
M11233_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q5_01 		0.797 0.797
NFATC1
M11234_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q5 		0.797 0.797
NFATC1
M05713_2.00 		Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_1 		0.797 0.797
NFATC1
M05714_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_2 		0.797 0.797
ENSTNIG00000018271
M02445_2.00 		Tetraodon nigroviridis
DNDTTCCRNN
NNYGGAAHNH		 PBM
Weirauch et al.(2014)
pTH9005 		0.720 0.720
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000388910-D1 Rel 433 592

Links

Other Rel family TFs
Other Bos grunniens TFs

250 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo3g019610 Brassica oleracea Bo3g019610 I 0.000
Bra006851 Brassica rapa Bra006851 I 0.000
GSMUA_Achr2G16730_001 Musa acuminata GSMUA_Achr2G16730_001 I 0.000
GSMUA_Achr7G09030_001 Musa acuminata GSMUA_Achr7G09030_001 I 0.000
PGSC0003DMG400002337 Solanum tuberosum PGSC0003DMG400002337 I 0.000
MDP0000309902 Malus domestica MDP0000309902 I 0.000
PK21934.1 Cannabis sativa PK21934.1 I 0.000
AMTR_s00064p00107710 Amborella trichopoda AMTR_s00064p00107710 N 0.000
GATA22 Arabidopsis thaliana AT4G26150 N 0.000
GATA21 Arabidopsis thaliana AT5G56860 N 0.000
BGIOSGA006859 Oryza indica BGIOSGA006859 N 0.000
BGIOSGA023117 Oryza indica BGIOSGA023117 N 0.000
BGIOSGA023119 Oryza indica BGIOSGA023119 N 0.000
Bo1g042950 Brassica oleracea Bo1g042950 N 0.000
Bo2g033970 Brassica oleracea Bo2g033970 N 0.000
Bo7g110740 Brassica oleracea Bo7g110740 N 0.000
Bo9g127360 Brassica oleracea Bo9g127360 N 0.000
Bra002788 Brassica rapa Bra002788 N 0.000
Bra019118 Brassica rapa Bra019118 N 0.000
Bra026461 Brassica rapa Bra026461 N 0.000
Bra035633 Brassica rapa Bra035633 N 0.000
BRADI1G37480 Brachypodium distachyon BRADI1G37480 N 0.000
BRADI3G08240 Brachypodium distachyon BRADI3G08240 N 0.000
CGA1 Arabidopsis lyrata fgenesh2_kg.7__1630__AT4G26150.1 N 0.000
GNC Arabidopsis lyrata fgenesh2_kg.8__1592__AT5G56860.1 N 0.000
GLYMA04G05431 Glycine max GLYMA04G05431 N 0.000
GLYMA13G00200 Glycine max GLYMA13G00200 N 0.000
GLYMA14G10830 Glycine max GLYMA14G10830 N 0.000
GLYMA15G18380 Glycine max GLYMA15G18380 N 0.000
GLYMA17G06290 Glycine max GLYMA17G06290 N 0.000
GLYMA17G34670 Glycine max GLYMA17G34670 N 0.000
GRMZM2G031983 Zea mays GRMZM2G031983 N 0.000
GRMZM2G039586 Zea mays GRMZM2G039586 N 0.000
GSMUA_Achr10G27510_001 Musa acuminata GSMUA_Achr10G27510_001 N 0.000
GSMUA_Achr4G30820_001 Musa acuminata GSMUA_Achr4G30820_001 N 0.000
GSMUA_Achr8G24880_001 Musa acuminata GSMUA_Achr8G24880_001 N 0.000
LPERR02G07780 Leersia perrieri LPERR02G07780 N 0.000
LPERR06G15680 Leersia perrieri LPERR06G15680 N 0.000
MLOC_10364 Hordeum vulgare MLOC_10364 N 0.000
MLOC_70809 Hordeum vulgare MLOC_70809 N 0.000
MTR_1g016170 Medicago truncatula MTR_1g016170 N 0.000
MTR_2g038720 Medicago truncatula MTR_2g038720 N 0.000
MTR_4g126350 Medicago truncatula MTR_4g126350 N 0.000
OB02G18010 Oryza brachyantha OB02G18010 N 0.000
OB06G26630 Oryza brachyantha OB06G26630 N 0.000
OBART02G08990 Oryza barthii OBART02G08990 N 0.000
OBART06G19060 Oryza barthii OBART06G19060 N 0.000
OGLUM02G09200 Oryza glumaepatula OGLUM02G09200 N 0.000
OGLUM06G20240 Oryza glumaepatula OGLUM06G20240 N 0.000
OMERI02G10250 Oryza meridionalis OMERI02G10250 N 0.000
ONIVA06G22870 Oryza nivara ONIVA06G22870 N 0.000
ONIVA11G03260 Oryza nivara ONIVA11G03260 N 0.000
OPUNC02G08040 Oryza punctata OPUNC02G08040 N 0.000
OPUNC06G17260 Oryza punctata OPUNC06G17260 N 0.000
ORGLA06G0158200 Oryza glaberrima ORGLA06G0158200 N 0.000
ORUFI02G09020 Oryza rufipogon ORUFI02G09020 N 0.000
ORUFI06G20160 Oryza rufipogon ORUFI06G20160 N 0.000
OS02G0220400 Oryza sativa OS02G0220400 N 0.000
OS06G0571800 Oryza sativa OS06G0571800 N 0.000
PGSC0003DMG400000280 Solanum tuberosum PGSC0003DMG400000280 N 0.000
PGSC0003DMG400004493 Solanum tuberosum PGSC0003DMG400004493 N 0.000
POPTR_0006s24560 Populus trichocarpa POPTR_0006s24560 N 0.000
POPTR_0018s05160 Populus trichocarpa POPTR_0018s05160 N 0.000
PRUPE_ppa018120mg Prunus persica PRUPE_ppa018120mg N 0.000
PRUPE_ppa024374mg Prunus persica PRUPE_ppa024374mg N 0.000
Sb04g007750 Sorghum bicolor Sb04g007750 N 0.000
Sb10g022580 Sorghum bicolor Sb10g022580 N 0.000
Si006733m.g Setaria italica Si006733m.g N 0.000
Si019058m.g Setaria italica Si019058m.g N 0.000
Solyc07g038160.2 Solanum lycopersicum Solyc07g038160.2 N 0.000
Solyc12g008830.1 Solanum lycopersicum Solyc12g008830.1 N 0.000
TCM_037285 Theobroma cacao TCM_037285 N 0.000
TCM_037666 Theobroma cacao TCM_037666 N 0.000
Traes_6AS_1BF0823061 Triticum aestivum Traes_6AS_1BF0823061 N 0.000
Traes_6AS_1BF082306 Triticum aestivum Traes_6AS_1BF082306 N 0.000
Traes_6BS_4EA352A7A Triticum aestivum Traes_6BS_4EA352A7A N 0.000
Traes_6DS_77038429A Triticum aestivum Traes_6DS_77038429A N 0.000
Traes_7BL_86BB5C61E Triticum aestivum Traes_7BL_86BB5C61E N 0.000
Traes_7DL_BFADB408C Triticum aestivum Traes_7DL_BFADB408C N 0.000
VIT_04s0008g01290 Vitis vinifera VIT_04s0008g01290 N 0.000
VIT_11s0016g02210 Vitis vinifera VIT_11s0016g02210 N 0.000
Cla021191 Citrullus lanatus Cla021191 N 0.000
Pm005502 Prunus mume Pm005502 N 0.000
Pm027164 Prunus mume Pm027164 N 0.000
29794.m003323 Ricinus communis 29794.m003323 N 0.000
29912.m005322 Ricinus communis 29912.m005322 N 0.000
cassava32152.m1 Manihot esculenta cassava32152.m1 N 0.000
cassava33236.m1 Manihot esculenta cassava33236.m1 N 0.000
cassava43851.valid.m1 Manihot esculenta cassava43851.valid.m1 N 0.000
Cucsa.353330 Cucumis sativus Cucsa.353330 N 0.000
Cucsa.397360 Cucumis sativus Cucsa.397360 N 0.000
mgf008387m Mimulus guttatus mgf008387m N 0.000
mgf025842m Mimulus guttatus mgf025842m N 0.000
Aquca_020_00467 Aquilegia coerulea Aquca_020_00467 N 0.000
Bostr.26833s0575 Boechera stricta Bostr.26833s0575 N 0.000
Bostr.7867s0434 Boechera stricta Bostr.7867s0434 N 0.000
Cagra.3467s0056 Capsella grandiflora Cagra.3467s0056 N 0.000
Cagra.4138s0005 Capsella grandiflora Cagra.4138s0005 N 0.000
Carubv10005113m.g Capsella rubella Carubv10005113m.g N 0.000
Carubv10026556m.g Capsella rubella Carubv10026556m.g N 0.000
Ciclev10008943m.g Citrus clementina Ciclev10008943m.g N 0.000
Ciclev10008968m.g Citrus clementina Ciclev10008968m.g N 0.000
Ciclev10009004m.g Citrus clementina Ciclev10009004m.g N 0.000
Eucgr.C03048 Eucalyptus grandis Eucgr.C03048 N 0.000
Eucgr.C03895 Eucalyptus grandis Eucgr.C03895 N 0.000
evm.TU.supercontig_93.28 Carica papaya evm.TU.supercontig_93.28 N 0.000
gene02686-v1.0-hybrid Fragaria vesca gene02686-v1.0-hybrid N 0.000
gene12624-v1.0-hybrid Fragaria vesca gene12624-v1.0-hybrid N 0.000
Gorai.009G031400 Gossypium raimondii Gorai.009G031400 N 0.000
Gorai.009G045000 Gossypium raimondii Gorai.009G045000 N 0.000
Gorai.010G082800 Gossypium raimondii Gorai.010G082800 N 0.000
Gorai.010G101100 Gossypium raimondii Gorai.010G101100 N 0.000
Lus10029863.g Linum usitatissimum Lus10029863.g N 0.000
MDP0000131803 Malus domestica MDP0000131803 N 0.000
MDP0000190038 Malus domestica MDP0000190038 N 0.000
MDP0000237740 Malus domestica MDP0000237740 N 0.000
MDP0000739900 Malus domestica MDP0000739900 N 0.000
orange1.1g020987m.g Citrus sinensis orange1.1g020987m.g N 0.000
orange1.1g021329m.g Citrus sinensis orange1.1g021329m.g N 0.000
orange1.1g021859m.g Citrus sinensis orange1.1g021859m.g N 0.000
Pavir.Aa02907 Panicum virgatum Pavir.Aa02907 N 0.000
Pavir.Ab00790 Panicum virgatum Pavir.Ab00790 N 0.000
Pavir.Da00760 Panicum virgatum Pavir.Da00760 N 0.000
Pavir.Db01250 Panicum virgatum Pavir.Db01250 N 0.000
SapurV1A.0086s0290 Salix purpurea SapurV1A.0086s0290 N 0.000
Thhalv10013793m.g Eutrema salsugineum Thhalv10013793m.g N 0.000
Thhalv10025461m.g Eutrema salsugineum Thhalv10025461m.g N 0.000
PK07593.1 Cannabis sativa PK07593.1 N 0.000
chr4.CM0244.740.nd Lotus japonicus chr4.CM0244.740.nd N 0.000
chr5.CM0019.380.nc Lotus japonicus chr5.CM0019.380.nc N 0.000