ENSONIG00000013271 (Oreochromis niloticus)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03165 (MH1) IPR003619 ENSONIG00000013271 T324822_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Smad3
M00192_2.00 		Mus musculus
NNNNNMGMCN
NGKCKNNNNN		 PBM
Badis et al.(2009)
Smad3_3805 		0.931 0.931
SMAD3
M03482_2.00 		Homo sapiens
YGTCTAGACA
TGTCTAGACR		 SELEX
Jolma et al.(2013)
SMAD3_1 		0.931 0.931
SMAD3
M09380_2.00 		Homo sapiens
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_HUMAN.H11MO.0.B 		0.931 0.931
Smad3
M09384_2.00 		Mus musculus
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_MOUSE.H11MO.0.B 		0.931 0.931
Smad3
M09637_2.00 		Mus musculus
BYAGMCWN
NWGKCTRV		 Misc
Heinz et al.(2010)
NPC-Smad3_GSE36673 		0.931 0.931
SMAD3
M11283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_01 		0.931 0.931
SMAD3
M11284_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_02 		0.931 0.931
SMAD3
M11285_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6 		0.931 0.931
Mad
M06446_2.00 		Drosophila melanogaster
GYGHCGBCVS
SBGVCGDCRC		 B1H
Zhu et al.(2011)
Mad_FlyReg_FBgn0011648 		0.713 0.713
Mad
M08427_2.00 		Drosophila melanogaster
SNGRCGMSRVSRBNS
SNVYSBYSKCGYCNS		 ChIP-chip
Mathelier et al.(2014)
MA0535.1 		0.713 0.713
Mad
M09692_2.00 		Drosophila melanogaster
KCBGSHGKCGCSNC
GNSGCGMCDSCVGM		 Misc
Kulakovskiy et al.(2009)
Mad 		0.713 0.713
Mad
M11293_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$MAD_Q6 		0.713 0.713
SMAD9
M11274_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_01 		0.713 0.713
Smad9
M11290_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_02 		0.713 0.713
Smad9
M11289_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_03 		0.713 0.713
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSONIP00000016692 SMAD 31 163

Links

Other SMAD family TFs
Other Oreochromis niloticus TFs

246 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK24580.1 Cannabis sativa PK24580.1 D
ERF118 Arabidopsis thaliana AT1G68550 D
Ca_05485 Cicer arietinum Ca_05485 I
LjSGA_132504.1 Lotus japonicus LjSGA_132504.1 I
LjSGA_016572.1 Lotus japonicus LjSGA_016572.1 I
chr6.LjT13N05.60.nc Lotus japonicus chr6.LjT13N05.60.nc I
Gorai.008G183300 Gossypium raimondii Gorai.008G183300 I
Eucgr.G02326 Eucalyptus grandis Eucgr.G02326 I
Cucsa.365320 Cucumis sativus Cucsa.365320 I
Cucsa.256230 Cucumis sativus Cucsa.256230 I
Cla008128 Citrullus lanatus Cla008128 I
VIT_01s0011g03470 Vitis vinifera VIT_01s0011g03470 I
TCM_011811 Theobroma cacao TCM_011811 I
Solyc05g009450.1 Solanum lycopersicum Solyc05g009450.1 I
Solyc04g007180.1 Solanum lycopersicum Solyc04g007180.1 I
PGSC0003DMG400015880 Solanum tuberosum PGSC0003DMG400015880 I
PGSC0003DMG400014541 Solanum tuberosum PGSC0003DMG400014541 I
GLYMA20G24920 Glycine max GLYMA20G24920 I
GLYMA10G42130 Glycine max GLYMA10G42130 I
GLYMA08G15830 Glycine max GLYMA08G15830 I
fgenesh2_kg.2__1107__AT1G68550.2 Arabidopsis lyrata fgenesh2_kg.2__1107__AT1G68550.2 I
Cla020699 Citrullus lanatus Cla020699 N
Cucsa.283620 Cucumis sativus Cucsa.283620 N