PDK_20s1767201g001 (Phoenix dactylifera)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 PDK_20s1767201g001 T335307_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1767201g001 Sox 83 138
PDK_20s1767201g001 Sox 189 255
PDK_20s1767201g001 Sox 318 386

Links

Other Sox family TFs
Other Phoenix dactylifera TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla011101 Citrullus lanatus Cla011101 I 0.484
chr4.CM0025.190.nd Lotus japonicus chr4.CM0025.190.nd I 0.421
Pavir.J07596 Panicum virgatum Pavir.J07596 I 0.418
Pavir.Ab01026 Panicum virgatum Pavir.Ab01026 I 0.425
Gorai.007G025500 Gossypium raimondii Gorai.007G025500 I 0.438
gene32050-v1.0-hybrid Fragaria vesca gene32050-v1.0-hybrid I 0.434
Aquca_013_00142 Aquilegia coerulea Aquca_013_00142 I 0.444
mgf015439m Mimulus guttatus mgf015439m I 0.442
30190.m010807 Ricinus communis 30190.m010807 I 0.435
VIT_02s0025g01220 Vitis vinifera VIT_02s0025g01220 I 0.511
TCM_016416 Theobroma cacao TCM_016416 I 0.454
Sb04g009610 Sorghum bicolor Sb04g009610 I 0.438
POPTR_0003s13780 Populus trichocarpa POPTR_0003s13780 I 0.434
POPTR_0001s10410 Populus trichocarpa POPTR_0001s10410 I 0.417
MTR_8g099305 Medicago truncatula MTR_8g099305 I 0.418
GRMZM2G060253 Zea mays GRMZM2G060253 I 0.438
AMTR_s00093p00057150 Amborella trichopoda AMTR_s00093p00057150 N 0.416
MLOC_57360 Hordeum vulgare MLOC_57360 N 0.424