ENSLOCG00000002370 (Lepisosteus oculatus)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSLOCG00000002370 T340006_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbx1
M00832_2.00 		Mus musculus
NRGTGTGAANN
NNTTCACACYN		 PBM
Weirauch et al.(2013)
pTH3822 		0.758 0.731
TBX1
M03570_2.00 		Homo sapiens
ARGTGTKAAAWHARGTGTGA
TCACACYTDWTTTMACACYT		 SELEX
Jolma et al.(2013)
TBX1_1 		0.758 0.731
TBX1
M03571_2.00 		Homo sapiens
AGGTGTGAWWTTCACACCT
AGGTGTGAAWWTCACACCT		 SELEX
Jolma et al.(2013)
TBX1_2 		0.758 0.731
TBX1
M03572_2.00 		Homo sapiens
AGGTGTGA
TCACACCT		 SELEX
Jolma et al.(2013)
TBX1_3 		0.758 0.731
TBX1
M03573_2.00 		Homo sapiens
YYTCACACMTYWRAGGTGTGAAA
TTTCACACCTYWRAKGTGTGARR		 SELEX
Jolma et al.(2013)
TBX1_4 		0.758 0.731
TBX1
M03574_2.00 		Homo sapiens
YTCACACCTDKAGGTGTGAA
TTCACACCTMHAGGTGTGAR		 SELEX
Jolma et al.(2013)
TBX1_5 		0.758 0.731
TBX1
M05821_2.00 		Homo sapiens
BDRGGTGTGARV
BYTCACACCYHV		 SELEX
Yin et al.(2017)
TBX1_eDBD_HT-SELEX 		0.758 0.731
Tbx1
M11386_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX1_07 		0.758 0.731
TBX1
M05822_2.00 		Homo sapiens
DNWGGTGTGARN
NYTCACACCWNH		 SELEX
Yin et al.(2017)
TBX1_eDBD_Methyl-HT-SELEX 		0.758 0.731
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000002786 T-box 151 327

Links

Other T-box family TFs
Other Lepisosteus oculatus TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMXG00000014832 Astyanax mexicanus ENSAMXG00000014832 N
HMGB1 Bos taurus ENSBTAG00000014862 N
ENSBTAG00000031711 Bos taurus ENSBTAG00000031711 N
hmg1/2 Ciona intestinalis ENSCING00000004075 N
ENSCJAG00000008378 Callithrix jacchus ENSCJAG00000008378 N
ENSCJAG00000008384 Callithrix jacchus ENSCJAG00000008384 N
ENSCJAG00000014214 Callithrix jacchus ENSCJAG00000014214 N
ENSCJAG00000022832 Callithrix jacchus ENSCJAG00000022832 N
ENSCJAG00000033322 Callithrix jacchus ENSCJAG00000033322 N
ENSCPOG00000003985 Cavia porcellus ENSCPOG00000003985 N
ENSCSAG00000013078 Chlorocebus sabaeus ENSCSAG00000013078 N
ENSCSAVG00000000341 Ciona savignyi ENSCSAVG00000000341 N
hmgb2a Danio rerio ENSDARG00000029722 N
ENSDNOG00000005537 Dasypus novemcinctus ENSDNOG00000005537 N
ENSDNOG00000046844 Dasypus novemcinctus ENSDNOG00000046844 N
ENSECAG00000003655 Equus caballus ENSECAG00000003655 N
ENSECAG00000005186 Equus caballus ENSECAG00000005186 N
hmgb1b Gasterosteus aculeatus ENSGACG00000011447 N
ENSGMOG00000010060 Gadus morhua ENSGMOG00000010060 N
ENSGMOG00000010657 Gadus morhua ENSGMOG00000010657 N
ENSMEUG00000011289 Macropus eugenii ENSMEUG00000011289 N
HMGB1 Microcebus murinus ENSMICG00000006213 N
ENSMICG00000016224 Microcebus murinus ENSMICG00000016224 N
ENSMMUG00000001275 Macaca mulatta ENSMMUG00000001275 N
ENSMMUG00000019832 Macaca mulatta ENSMMUG00000019832 N
HMGB2 Macaca mulatta ENSMMUG00000020008 N
ENSMODG00000004606 Monodelphis domestica ENSMODG00000004606 N
ENSMODG00000009238 Monodelphis domestica ENSMODG00000009238 N
ENSMPUG00000018359 Mustela putorius furo ENSMPUG00000018359 N
ENSOARG00000010383 Ovis aries ENSOARG00000010383 N
ENSOARG00000011611 Ovis aries ENSOARG00000011611 N
ENSOARG00000015382 Ovis aries ENSOARG00000015382 N
ENSOARG00000015955 Ovis aries ENSOARG00000015955 N
ENSOARG00000017078 Ovis aries ENSOARG00000017078 N
ENSOCUG00000004133 Oryctolagus cuniculus ENSOCUG00000004133 N
ENSOCUG00000021132 Oryctolagus cuniculus ENSOCUG00000021132 N
ENSOCUG00000023449 Oryctolagus cuniculus ENSOCUG00000023449 N
HMGB3 Oryctolagus cuniculus ENSOCUG00000024959 N
ENSOCUG00000027747 Oryctolagus cuniculus ENSOCUG00000027747 N
ENSOGAG00000027410 Otolemur garnettii ENSOGAG00000027410 N
ENSOGAG00000028411 Otolemur garnettii ENSOGAG00000028411 N
ENSOGAG00000032152 Otolemur garnettii ENSOGAG00000032152 N
ENSOGAG00000033437 Otolemur garnettii ENSOGAG00000033437 N
ENSONIG00000005505 Oreochromis niloticus ENSONIG00000005505 N
ENSONIG00000019935 Oreochromis niloticus ENSONIG00000019935 N
ENSPANG00000005029 Papio anubis ENSPANG00000005029 N
ENSPANG00000007527 Papio anubis ENSPANG00000007527 N
ENSPANG00000011105 Papio anubis ENSPANG00000011105 N
ENSPFOG00000004533 Poecilia formosa ENSPFOG00000004533 N
ENSPFOG00000008464 Poecilia formosa ENSPFOG00000008464 N
ENSPPYG00000011668 Pongo abelii ENSPPYG00000011668 N
Hmgb2l1 Rattus norvegicus ENSRNOG00000013167 N
RGD1561694 Rattus norvegicus ENSRNOG00000029107 N
AC127605.1 Rattus norvegicus ENSRNOG00000033156 N
Hmgb2 Rattus norvegicus ENSRNOG00000033321 N
Hmg1l1 Rattus norvegicus ENSRNOG00000034130 N
LOC108350839 Rattus norvegicus ENSRNOG00000038437 N
LOC108349258 Rattus norvegicus ENSRNOG00000047496 N
LOC103694516 Rattus norvegicus ENSRNOG00000049646 N
LOC688583 Rattus norvegicus ENSRNOG00000050910 N
Hmg1l1 Rattus norvegicus ENSRNOG00000051482 N
AABR07030543.1 Rattus norvegicus ENSRNOG00000051634 N
LOC103694517 Rattus norvegicus ENSRNOG00000052269 N
RGD1561558 Rattus norvegicus ENSRNOG00000053609 N
RGD1566225 Rattus norvegicus ENSRNOG00000055742 N
AABR07045786.1 Rattus norvegicus ENSRNOG00000055923 N
LOC681067 Rattus norvegicus ENSRNOG00000057013 N
LOC691030 Rattus norvegicus ENSRNOG00000057926 N
AC135696.1 Rattus norvegicus ENSRNOG00000058908 N
RGD1560585 Rattus norvegicus ENSRNOG00000060534 N
HMGB2 Sus scrofa ENSSSCG00000009704 N
ENSSSCG00000020770 Sus scrofa ENSSSCG00000020770 N
ENSSSCG00000024283 Sus scrofa ENSSSCG00000024283 N
ENSSTOG00000000443 Ictidomys tridecemlineatus ENSSTOG00000000443 N
ENSSTOG00000012404 Ictidomys tridecemlineatus ENSSTOG00000012404 N
hmgb1b Takifugu rubripes ENSTRUG00000004822 N
ENSXMAG00000006844 Xiphophorus maculatus ENSXMAG00000006844 N
ISCW017350 Ixodes scapularis ISCW017350 N
SMAR013695 Strigamia maritima SMAR013695 N
Smp_100090 Schistosoma mansoni Smp_100090 N
tetur02g08260 Tetranychus urticae tetur02g08260 N
tetur02g08340 Tetranychus urticae tetur02g08340 N
Myotis_brandtii_Hmgb1_10003213 Myotis brandtii Myotis_brandtii_Hmgb1_10003213 N
Myotis_brandtii_Hmgb1_10026956 Myotis brandtii Myotis_brandtii_Hmgb1_10026956 N
Myotis_brandtii_Hmgb2_10018437 Myotis brandtii Myotis_brandtii_Hmgb2_10018437 N
Myotis_brandtii_HMGB3_10026974 Myotis brandtii Myotis_brandtii_HMGB3_10026974 N
Sakowv30042012m.g Saccoglossus kowalevskii Sakowv30042012m.g N
AAC59859 Xenopus laevis AAC59859 N
AAH73449 Xenopus laevis AAH73449 N
Sjc_0051340 Schistosoma japonicum Sjc_0051340 N
SMU15024564 Schmidtea mediterranea SMU15024564 N
SMU15027649 Schmidtea mediterranea SMU15027649 N
hmgb2.S Xenopus laevis XB-GENE-1000251 N
A_00070 Schistosoma haematobium A_00070 N
csin112095 Clonorchis sinensis csin112095 N
ECANG7_07075 Echinococcus canadensis ECANG7_07075 N
EmuJ_000941400 Echinococcus multilocularis EmuJ_000941400 N
HNAJ_0000227501 Hymenolepis nana HNAJ_0000227501 N
MCOS_0000588101 Mesocestoides corti MCOS_0000588101 N
PXEA_0000637001 Protopolystoma xenopodis PXEA_0000637001 N
SCUD_0001034301 Schistosoma curassoni SCUD_0001034301 N
SMRZ_0000842001 Schistosoma margrebowiei SMRZ_0000842001 N
SMTD_0001017101 Schistosoma mattheei SMTD_0001017101 N
SROB_0000500401 Schistosoma rodhaini SROB_0000500401 N
SSLN_0001302101 Schistocephalus solidus SSLN_0001302101 N
T265_10726 Opisthorchis viverrini T265_10726 N
TASK_0000795701 Taenia asiatica TASK_0000795701 N
TRE_0000690301 Trichobilharzia regenti TRE_0000690301 N
TsM_000746700 Taenia solium TsM_000746700 N
TTAC_0000939701 Hydatigera taeniaeformis TTAC_0000939701 N