CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HMPREF1541_01855
(
Cyphellophora europaea
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
HMPREF1541_01855
T370877_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ETN42697
Zinc cluster
28
69
RPCDVCRKRKSRCVKELGQNKCVLCTFHQRDCTYLDAPARRK
Links
Other
Zinc cluster
family TFs
Other
Cyphellophora europaea
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BZIP68
Arabidopsis thaliana
AT1G32150
D
BZIP16
Arabidopsis thaliana
AT2G35530
D
GBF2
Arabidopsis thaliana
AT4G01120
D
GBF1
Arabidopsis thaliana
AT4G36730
D
EMBP1_WHEAT
Triticum aestivum
EMBP1_WHEAT
D
Q40645_ORYSA
Oryza sativa
Q40645_ORYSA
D
EmBP-1
Triticum aestivum
Traes_5AL_9BC38814C
D
CPRF1_PETCR
Petroselinum crispum
CPRF1_PETCR
D
CPRF3_PETCR
Petroselinum crispum
CPRF3_PETCR
D
Q41109_PHAVU
Phaseolus vulgaris
Q41109_PHAVU
D
TAF1_TOBAC
Nicotiana tabacum
TAF1_TOBAC
D
PK09653.1
Cannabis sativa
PK09653.1
D
PK23964.1
Cannabis sativa
PK23964.1
D
GBF2
Arabidopsis lyrata
Al_scaffold_0006_3899
I
AMTR_s00048p00108400
Amborella trichopoda
AMTR_s00048p00108400
I
AMTR_s00059p00094730
Amborella trichopoda
AMTR_s00059p00094730
I
AMTR_s00158p00056990
Amborella trichopoda
AMTR_s00158p00056990
I
BGIOSGA001085
Oryza indica
BGIOSGA001085
I
BGIOSGA007448
Oryza indica
BGIOSGA007448
I
BGIOSGA013793
Oryza indica
BGIOSGA013793
I
BGIOSGA020389
Oryza indica
BGIOSGA020389
I
BGIOSGA025382
Oryza indica
BGIOSGA025382
I
BGIOSGA036419
Oryza indica
BGIOSGA036419
I
Bo1g005460
Brassica oleracea
Bo1g005460
I
Bo3g028300
Brassica oleracea
Bo3g028300
I
Bo4g038560
Brassica oleracea
Bo4g038560
I
Bo4g183320
Brassica oleracea
Bo4g183320
I
Bo9g003700
Brassica oleracea
Bo9g003700
I
Bra005335
Brassica rapa
Bra005335
I
Bra010572
Brassica rapa
Bra010572
I
Bra011701
Brassica rapa
Bra011701
I
Bra037382
Brassica rapa
Bra037382
I
BRADI1G54180
Brachypodium distachyon
BRADI1G54180
I
BRADI1G68560
Brachypodium distachyon
BRADI1G68560
I
BRADI2G15940
Brachypodium distachyon
BRADI2G15940
I
BRADI2G45567
Brachypodium distachyon
BRADI2G45567
I
BRADI4G39630
Brachypodium distachyon
BRADI4G39630
I
F775_07803
Aegilops tauschii
F775_07803
I
F775_14728
Aegilops tauschii
F775_14728
I
F775_32205
Aegilops tauschii
F775_32205
I
bZIP68
Arabidopsis lyrata
fgenesh2_kg.1__3350__AT1G32150.1
I
GLYMA01G01740
Glycine max
GLYMA01G01740
I
GLYMA01G38381
Glycine max
GLYMA01G38381
I
GLYMA02G06550
Glycine max
GLYMA02G06550
I
GLYMA03G41590
Glycine max
GLYMA03G41590
I
GLYMA07G06620
Glycine max
GLYMA07G06620
I
GLYMA08G34280
Glycine max
GLYMA08G34280
I
GLYMA09G34170
Glycine max
GLYMA09G34170
I
GLYMA16G03190
Glycine max
GLYMA16G03190
I
GLYMA16G15810
Glycine max
GLYMA16G15810
I
GLYMA16G25600
Glycine max
GLYMA16G25600
I
GLYMA19G44190
Glycine max
GLYMA19G44190
I
GRMZM2G011932
Zea mays
GRMZM2G011932
I
GRMZM2G019106
Zea mays
GRMZM2G019106
I
GRMZM2G074373
Zea mays
GRMZM2G074373
I
GRMZM2G088140
Zea mays
GRMZM2G088140
I
GRMZM2G095078
Zea mays
GRMZM2G095078
I
GRMZM2G117851
Zea mays
GRMZM2G117851
I
GRMZM2G153144
Zea mays
GRMZM2G153144
I
GRMZM2G160136
Zea mays
GRMZM2G160136
I
GRMZM2G171370
Zea mays
GRMZM2G171370
I
GRMZM2G358701
Zea mays
GRMZM2G358701
I
GRMZM5G848942
Zea mays
GRMZM5G848942
I
GSMUA_Achr1G05050_001
Musa acuminata
GSMUA_Achr1G05050_001
I
GSMUA_Achr4G04530_001
Musa acuminata
GSMUA_Achr4G04530_001
I
GSMUA_Achr4G33130_001
Musa acuminata
GSMUA_Achr4G33130_001
I
GSMUA_Achr6G00170_001
Musa acuminata
GSMUA_Achr6G00170_001
I
GSMUA_Achr6G32000_001
Musa acuminata
GSMUA_Achr6G32000_001
I
GSMUA_Achr9G05310_001
Musa acuminata
GSMUA_Achr9G05310_001
I
LPERR01G21580
Leersia perrieri
LPERR01G21580
I
LPERR03G32540
Leersia perrieri
LPERR03G32540
I
LPERR05G21930
Leersia perrieri
LPERR05G21930
I
LPERR07G06120
Leersia perrieri
LPERR07G06120
I
LPERR12G05920
Leersia perrieri
LPERR12G05920
I
MLOC_63066
Hordeum vulgare
MLOC_63066
I
MLOC_6711
Hordeum vulgare
MLOC_6711
I
MLOC_79342
Hordeum vulgare
MLOC_79342
I
MTR_5g028850
Medicago truncatula
MTR_5g028850
I
MTR_7g116890
Medicago truncatula
MTR_7g116890
I
MTR_8g070820
Medicago truncatula
MTR_8g070820
I
MTR_8g077950
Medicago truncatula
MTR_8g077950
I
OB01G34490
Oryza brachyantha
OB01G34490
I
OB02G12150
Oryza brachyantha
OB02G12150
I
OB05G33790
Oryza brachyantha
OB05G33790
I
OB07G15280
Oryza brachyantha
OB07G15280
I
OB12G16310
Oryza brachyantha
OB12G16310
I
OBART01G25300
Oryza barthii
OBART01G25300
I
OBART05G26280
Oryza barthii
OBART05G26280
I
OBART07G07070
Oryza barthii
OBART07G07070
I
OBART12G06770
Oryza barthii
OBART12G06770
I
OGLUM01G29060
Oryza glumaepatula
OGLUM01G29060
I
OGLUM05G27920
Oryza glumaepatula
OGLUM05G27920
I
OGLUM07G06770
Oryza glumaepatula
OGLUM07G06770
I
OGLUM12G08090
Oryza glumaepatula
OGLUM12G08090
I
OLONG_003667
Oryza longistaminata
OLONG_003667
I
OLONG_021599
Oryza longistaminata
OLONG_021599
I
OLONG_021967
Oryza longistaminata
OLONG_021967
I
OLONG_022047
Oryza longistaminata
OLONG_022047
I
OMERI01G23000
Oryza meridionalis
OMERI01G23000
I
OMERI03G30340
Oryza meridionalis
OMERI03G30340
I
OMERI06G11100
Oryza meridionalis
OMERI06G11100
I
OMERI07G05820
Oryza meridionalis
OMERI07G05820
I
OMERI12G04560
Oryza meridionalis
OMERI12G04560
I
ONIVA01G28540
Oryza nivara
ONIVA01G28540
I
ONIVA02G02170
Oryza nivara
ONIVA02G02170
I
ONIVA05G28290
Oryza nivara
ONIVA05G28290
I
ONIVA07G05320
Oryza nivara
ONIVA07G05320
I
ONIVA12G06500
Oryza nivara
ONIVA12G06500
I
OPUNC01G25140
Oryza punctata
OPUNC01G25140
I
OPUNC02G01690
Oryza punctata
OPUNC02G01690
I
OPUNC05G23850
Oryza punctata
OPUNC05G23850
I
OPUNC07G06790
Oryza punctata
OPUNC07G06790
I
OPUNC12G06450
Oryza punctata
OPUNC12G06450
I
ORGLA01G0206000
Oryza glaberrima
ORGLA01G0206000
I
ORGLA02G0021500
Oryza glaberrima
ORGLA02G0021500
I
ORGLA05G0227800
Oryza glaberrima
ORGLA05G0227800
I
ORGLA12G0063500
Oryza glaberrima
ORGLA12G0063500
I
ORUFI01G28110
Oryza rufipogon
ORUFI01G28110
I
ORUFI05G28170
Oryza rufipogon
ORUFI05G28170
I
ORUFI07G07050
Oryza rufipogon
ORUFI07G07050
I
ORUFI12G07600
Oryza rufipogon
ORUFI12G07600
I
OS01G0658900
Oryza sativa
OS01G0658900
I
OS02G0128200
Oryza sativa
OS02G0128200
I
OS05G0569300
Oryza sativa
OS05G0569300
I
OS07G0209800
Oryza sativa
OS07G0209800
I
PGSC0003DMG400000088
Solanum tuberosum
PGSC0003DMG400000088
I
PGSC0003DMG400012660
Solanum tuberosum
PGSC0003DMG400012660
I
PGSC0003DMG400018469
Solanum tuberosum
PGSC0003DMG400018469
I
PGSC0003DMG400033876
Solanum tuberosum
PGSC0003DMG400033876
I
POPTR_0001s01840
Populus trichocarpa
POPTR_0001s01840
I
POPTR_0002s16870
Populus trichocarpa
POPTR_0002s16870
I
POPTR_0003s09630
Populus trichocarpa
POPTR_0003s09630
I
POPTR_0005s12750
Populus trichocarpa
POPTR_0005s12750
I
POPTR_0007s12460
Populus trichocarpa
POPTR_0007s12460
I
POPTR_0014s08990
Populus trichocarpa
POPTR_0014s08990
I
PRUPE_ppa006173mg
Prunus persica
PRUPE_ppa006173mg
I
PRUPE_ppa006484mg
Prunus persica
PRUPE_ppa006484mg
I
PRUPE_ppa008024mg
Prunus persica
PRUPE_ppa008024mg
I
Sb01g004080
Sorghum bicolor
Sb01g004080
I
Sb02g006350
Sorghum bicolor
Sb02g006350
I
Sb03g030050
Sorghum bicolor
Sb03g030050
I
Sb04g002360
Sorghum bicolor
Sb04g002360
I
Sb08g008300
Sorghum bicolor
Sb08g008300
I
Sb09g028990
Sorghum bicolor
Sb09g028990
I
GBF1
Arabidopsis lyrata
scaffold_700433.1
I
SELMODRAFT_125734
Selaginella moellendorffii
SELMODRAFT_125734
I
SELMODRAFT_129391
Selaginella moellendorffii
SELMODRAFT_129391
I
SELMODRAFT_135978
Selaginella moellendorffii
SELMODRAFT_135978
I
SELMODRAFT_38592
Selaginella moellendorffii
SELMODRAFT_38592
I
SELMODRAFT_38594
Selaginella moellendorffii
SELMODRAFT_38594
I
Si001929m.g
Setaria italica
Si001929m.g
I
Si017637m.g
Setaria italica
Si017637m.g
I
Si022325m.g
Setaria italica
Si022325m.g
I
Si022388m.g
Setaria italica
Si022388m.g
I
Si030123m.g
Setaria italica
Si030123m.g
I
Si039367m.g
Setaria italica
Si039367m.g
I
Solyc01g095460.2
Solanum lycopersicum
Solyc01g095460.2
I
Solyc02g062950.2
Solanum lycopersicum
Solyc02g062950.2
I
Solyc02g085610.2
Solanum lycopersicum
Solyc02g085610.2
I
Solyc05g050220.2
Solanum lycopersicum
Solyc05g050220.2
I
Solyc08g005290.2
Solanum lycopersicum
Solyc08g005290.2
I
Solyc08g076100.2
Solanum lycopersicum
Solyc08g076100.2
I
TCM_000436
Theobroma cacao
TCM_000436
I
TCM_005210
Theobroma cacao
TCM_005210
I
TCM_016606
Theobroma cacao
TCM_016606
I
Traes_1AL_F18EC96DF
Triticum aestivum
Traes_1AL_F18EC96DF
I
Traes_1BL_C5FEAF06E
Triticum aestivum
Traes_1BL_C5FEAF06E
I
Traes_1DL_23D036A85
Triticum aestivum
Traes_1DL_23D036A85
I
Traes_2BL_245DDBC7B
Triticum aestivum
Traes_2BL_245DDBC7B
I
Traes_5AS_3A85F1C2C
Triticum aestivum
Traes_5AS_3A85F1C2C
I
Traes_5BL_A5532B750
Triticum aestivum
Traes_5BL_A5532B750
I
Traes_5BL_F3018E8CA
Triticum aestivum
Traes_5BL_F3018E8CA
I
Traes_5BS_A5532B750
Triticum aestivum
Traes_5BS_A5532B750
I
Traes_5DL_75AEE92BB
Triticum aestivum
Traes_5DL_75AEE92BB
I
Traes_5DL_C794C1EEA
Triticum aestivum
Traes_5DL_C794C1EEA
I
Traes_7DL_67C4287B2
Triticum aestivum
Traes_7DL_67C4287B2
I
TRIUR3_18341
Triticum urartu
TRIUR3_18341
I
TRIUR3_31142
Triticum urartu
TRIUR3_31142
I
TRIUR3_34165
Triticum urartu
TRIUR3_34165
I
VIT_02s0012g02250
Vitis vinifera
VIT_02s0012g02250
I
GBF1
Vitis vinifera
VIT_04s0023g01360
I
VIT_15s0046g01440
Vitis vinifera
VIT_15s0046g01440
I
VIT_18s0001g12120
Vitis vinifera
VIT_18s0001g12120
I
Ca_01293
Cicer arietinum
Ca_01293
I
Ca_11455
Cicer arietinum
Ca_11455
I
Ca_15839
Cicer arietinum
Ca_15839
I
Ca_17787
Cicer arietinum
Ca_17787
I
Cla008988
Citrullus lanatus
Cla008988
I
Cla014415
Citrullus lanatus
Cla014415
I
Cla016502
Citrullus lanatus
Cla016502
I
Cla021500
Citrullus lanatus
Cla021500
I
Pm018422
Prunus mume
Pm018422
I
Pm023132
Prunus mume
Pm023132
I
29646.m001068
Ricinus communis
29646.m001068
I
30068.m002661
Ricinus communis
30068.m002661
I
30174.m008698
Ricinus communis
30174.m008698
I
cassava11837.valid.m1
Manihot esculenta
cassava11837.valid.m1
I
cassava29861.valid.m1
Manihot esculenta
cassava29861.valid.m1
I
cassava29862.valid.m1
Manihot esculenta
cassava29862.valid.m1
I
cassava37043.valid.m1
Manihot esculenta
cassava37043.valid.m1
I
cassava43569.valid.m1
Manihot esculenta
cassava43569.valid.m1
I
cassava43570.valid.m1
Manihot esculenta
cassava43570.valid.m1
I
cassava43571.valid.m1
Manihot esculenta
cassava43571.valid.m1
I
cassava45491.m1
Manihot esculenta
cassava45491.m1
I
cassava46468.m1
Manihot esculenta
cassava46468.m1
I
Cucsa.104970
Cucumis sativus
Cucsa.104970
I
Cucsa.258940
Cucumis sativus
Cucsa.258940
I
Cucsa.312800
Cucumis sativus
Cucsa.312800
I
Cucsa.322110
Cucumis sativus
Cucsa.322110
I
estExt_fgenesh1_pg.C_10522
Micromonas pusilla
estExt_fgenesh1_pg.C_10522
I
gw1.27.125.1
Physcomitrella patens
gw1.27.125.1
I
gw1.3.298.1
Physcomitrella patens
gw1.3.298.1
I
gw1.33.173.1
Physcomitrella patens
gw1.33.173.1
I
gw1.8.536.1
Micromonas pusilla
gw1.8.536.1
I
IGS.gm_10_00281
Chlorella NC64A
IGS.gm_10_00281
I
mgf000639m
Mimulus guttatus
mgf000639m
I
mgf003302m
Mimulus guttatus
mgf003302m
I
mgf005151m
Mimulus guttatus
mgf005151m
I
mgf008195m
Mimulus guttatus
mgf008195m
I
mgf008605m
Mimulus guttatus
mgf008605m
I
mgf013375m
Mimulus guttatus
mgf013375m
I
mgf013423m
Mimulus guttatus
mgf013423m
I
mgf014804m
Mimulus guttatus
mgf014804m
I
Aquca_002_01218
Aquilegia coerulea
Aquca_002_01218
I
Aquca_013_00209
Aquilegia coerulea
Aquca_013_00209
I
Aquca_037_00034
Aquilegia coerulea
Aquca_037_00034
I
Bostr.23794s0549
Boechera stricta
Bostr.23794s0549
I
Bostr.3359s0141
Boechera stricta
Bostr.3359s0141
I
Bostr.7365s0064
Boechera stricta
Bostr.7365s0064
I
Bostr.7867s1529
Boechera stricta
Bostr.7867s1529
I
Cagra.0993s0063
Capsella grandiflora
Cagra.0993s0063
I
Cagra.1372s0011
Capsella grandiflora
Cagra.1372s0011
I
Cagra.3359s0011
Capsella grandiflora
Cagra.3359s0011
I
Cagra.5996s0003
Capsella grandiflora
Cagra.5996s0003
I
Carubv10001247m.g
Capsella rubella
Carubv10001247m.g
I
Carubv10005287m.g
Capsella rubella
Carubv10005287m.g
I
Ciclev10001333m.g
Citrus clementina
Ciclev10001333m.g
I
Ciclev10020314m.g
Citrus clementina
Ciclev10020314m.g
I
Ciclev10025963m.g
Citrus clementina
Ciclev10025963m.g
I
estExt_fgenesh2_pg.C_Chr_020452
Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_020452
I
Eucgr.E00078
Eucalyptus grandis
Eucgr.E00078
I
Eucgr.E00223
Eucalyptus grandis
Eucgr.E00223
I
Eucgr.H01256
Eucalyptus grandis
Eucgr.H01256
I
evm.TU.supercontig_158.7
Carica papaya
evm.TU.supercontig_158.7
I
evm.TU.supercontig_2741.1
Carica papaya
evm.TU.supercontig_2741.1
I
gene13716-v1.0-hybrid
Fragaria vesca
gene13716-v1.0-hybrid
I
gene18928-v1.0-hybrid
Fragaria vesca
gene18928-v1.0-hybrid
I
gene29546-v1.0-hybrid
Fragaria vesca
gene29546-v1.0-hybrid
I
gene32022-v1.0-hybrid
Fragaria vesca
gene32022-v1.0-hybrid
I
Genemark1.5055_g
Coccomyxa subellipsoidea C169
Genemark1.5055_g
I
Gorai.003G185700
Gossypium raimondii
Gorai.003G185700
I
Gorai.004G153100
Gossypium raimondii
Gorai.004G153100
I
Gorai.004G181900
Gossypium raimondii
Gorai.004G181900
I
Gorai.007G105100
Gossypium raimondii
Gorai.007G105100
I
Gorai.007G205700
Gossypium raimondii
Gorai.007G205700
I
Gorai.008G068900
Gossypium raimondii
Gorai.008G068900
I
Gorai.008G123200
Gossypium raimondii
Gorai.008G123200
I
gw2.11.550.1
Micromonas sp RCC299
gw2.11.550.1
I
Lus10003034.g
Linum usitatissimum
Lus10003034.g
I
Lus10005146.g
Linum usitatissimum
Lus10005146.g
I
Lus10014324.g
Linum usitatissimum
Lus10014324.g
I
Lus10026033.g
Linum usitatissimum
Lus10026033.g
I
MDP0000138052
Malus domestica
MDP0000138052
I
MDP0000185553
Malus domestica
MDP0000185553
I
MDP0000231274
Malus domestica
MDP0000231274
I
MDP0000286846
Malus domestica
MDP0000286846
I
MDP0000493795
Malus domestica
MDP0000493795
I
MDP0000545420
Malus domestica
MDP0000545420
I
orange1.1g014660m.g
Citrus sinensis
orange1.1g014660m.g
I
orange1.1g018605m.g
Citrus sinensis
orange1.1g018605m.g
I
orange1.1g036551m.g
Citrus sinensis
orange1.1g036551m.g
I
Pavir.Aa03436
Panicum virgatum
Pavir.Aa03436
I
Pavir.Ab00132
Panicum virgatum
Pavir.Ab00132
I
Pavir.Ba03287
Panicum virgatum
Pavir.Ba03287
I
Pavir.Bb00931
Panicum virgatum
Pavir.Bb00931
I
Pavir.Ca00403
Panicum virgatum
Pavir.Ca00403
I
Pavir.Ca00968
Panicum virgatum
Pavir.Ca00968
I
Pavir.Cb01814
Panicum virgatum
Pavir.Cb01814
I
Pavir.Ea02315
Panicum virgatum
Pavir.Ea02315
I
Pavir.J01411
Panicum virgatum
Pavir.J01411
I
Pavir.J02462
Panicum virgatum
Pavir.J02462
I
Pavir.J09275
Panicum virgatum
Pavir.J09275
I
SapurV1A.0013s0770
Salix purpurea
SapurV1A.0013s0770
I
SapurV1A.0051s0250
Salix purpurea
SapurV1A.0051s0250
I
SapurV1A.0063s0130
Salix purpurea
SapurV1A.0063s0130
I
SapurV1A.0255s0070
Salix purpurea
SapurV1A.0255s0070
I
SapurV1A.0817s0110
Salix purpurea
SapurV1A.0817s0110
I
Thhalv10007879m.g
Eutrema salsugineum
Thhalv10007879m.g
I
Thhalv10016740m.g
Eutrema salsugineum
Thhalv10016740m.g
I
Thhalv10025733m.g
Eutrema salsugineum
Thhalv10025733m.g
I
Thhalv10028761m.g
Eutrema salsugineum
Thhalv10028761m.g
I
chr1.CM0579.280.nd
Lotus japonicus
chr1.CM0579.280.nd
I
chr2.LjT41P23.50.nc
Lotus japonicus
chr2.LjT41P23.50.nc
I
fgeneshCV_pg.C_scaffold_12000127
Chlorella vulgaris
fgeneshCV_pg.C_scaffold_12000127
I
LjSGA_036158.1
Lotus japonicus
LjSGA_036158.1
I
PDK_20s1310372g001
Phoenix dactylifera
PDK_20s1310372g001
I
PDK_20s1348391g002
Phoenix dactylifera
PDK_20s1348391g002
I
PDK_20s1349941g001
Phoenix dactylifera
PDK_20s1349941g001
I
PDK_20s1368181g001
Phoenix dactylifera
PDK_20s1368181g001
I
PDK_20s1372692g002
Phoenix dactylifera
PDK_20s1372692g002
I
PDK_20s1568831g001
Phoenix dactylifera
PDK_20s1568831g001
I
PDK_20s1708971g001
Phoenix dactylifera
PDK_20s1708971g001
I