CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRIREDRAFT_66828
(
Trichoderma reesei
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
TRIREDRAFT_66828
T385520_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_00568
M01347_2.00
Aspergillus nidulans
NRDWBSCCGV
BCGGSVWHYN
PBM
Lambert et al.(2019)
pEX0204
0.546
0.684
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EGR46216
Zinc cluster
45
82
AACLACRSKHLKCDGQTPCSRCIGSNFECIYVASRRGY
Links
Other
Zinc cluster
family TFs
Other
Trichoderma reesei
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Al_scaffold_0007_3741
Arabidopsis lyrata
Al_scaffold_0007_3741
I
0.000
AGL105
Arabidopsis thaliana
AT5G37415
I
0.000
AGL77
Arabidopsis thaliana
AT5G38740
I
0.000
AGL81
Arabidopsis thaliana
AT5G39750
I
0.000
AGL76
Arabidopsis thaliana
AT5G40120
I
0.000
Bostr.10058s0014
Boechera stricta
Bostr.10058s0014
I
0.000
Thhalv10005452m.g
Eutrema salsugineum
Thhalv10005452m.g
N
0.000
Thhalv10005435m.g
Eutrema salsugineum
Thhalv10005435m.g
N
0.000
Thhalv10002808m.g
Eutrema salsugineum
Thhalv10002808m.g
N
0.000
Carubv10003716m.g
Capsella rubella
Carubv10003716m.g
N
0.000
Carubv10003642m.g
Capsella rubella
Carubv10003642m.g
N
0.000
Cagra.29077s0001
Capsella grandiflora
Cagra.29077s0001
N
0.000
Bostr.29827s0112
Boechera stricta
Bostr.29827s0112
N
0.000
scaffold_602835.1
Arabidopsis lyrata
scaffold_602835.1
N
0.000
fgenesh2_kg.6__2748__AT5G27944.1
Arabidopsis lyrata
fgenesh2_kg.6__2748__AT5G27944.1
N
0.000
AT5G27944
Arabidopsis thaliana
AT5G27944
N
0.000
AGL89
Arabidopsis thaliana
AT5G27580
N
0.000
AGL54
Arabidopsis thaliana
AT5G27090
N
0.000
AGL53
Arabidopsis thaliana
AT5G27070
N
0.000
AGL93
Arabidopsis thaliana
AT5G26950
N
0.000
AT5G26865
Arabidopsis thaliana
AT5G26865
N
0.000