CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM02G17700
(
Oryza glumaepatula
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
OGLUM02G17700
T003198_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM02G17700.1
AP2
85
133
CIMRGVYFKNMKWQAAIKVDKKQIHLGTVGTQEEAARLYDRAAFMCGRE
Links
Other
AP2
family TFs
Other
Oryza glumaepatula
TFs
75 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30217.m000254
Ricinus communis
30217.m000254
N
0.683
AMTR_s00013p00252260
Amborella trichopoda
AMTR_s00013p00252260
N
0.765
AT4G13040
Arabidopsis thaliana
AT4G13040
N
0.721
BGIOSGA008254
Oryza indica
BGIOSGA008254
N
0.786
Bo11579s010
Brassica oleracea
Bo11579s010
N
0.705
Bo8g033910
Brassica oleracea
Bo8g033910
N
0.715
Bostr.2021s0045
Boechera stricta
Bostr.2021s0045
N
0.715
Bra034895
Brassica rapa
Bra034895
N
0.715
BRADI3G43822
Brachypodium distachyon
BRADI3G43822
N
0.780
Cagra.2997s0002
Capsella grandiflora
Cagra.2997s0002
N
0.715
Carubv10005663m.g
Capsella rubella
Carubv10005663m.g
N
0.715
cassava38073.valid.m1
Manihot esculenta
cassava38073.valid.m1
N
0.762
cassava6828.valid.m1
Manihot esculenta
cassava6828.valid.m1
N
0.758
Ca_11707
Cicer arietinum
Ca_11707
N
0.739
Ca_17230
Cicer arietinum
Ca_17230
N
0.752
chr1.LjT46N10.100.nd
Lotus japonicus
chr1.LjT46N10.100.nd
N
0.758
chr3.CM0423.200.nd
Lotus japonicus
chr3.CM0423.200.nd
N
0.739
Ciclev10021891m.g
Citrus clementina
Ciclev10021891m.g
N
0.765
Cla002744
Citrullus lanatus
Cla002744
N
0.761
Cla015151
Citrullus lanatus
Cla015151
N
0.743
Cucsa.078000
Cucumis sativus
Cucsa.078000
N
0.743
Cucsa.150110
Cucumis sativus
Cucsa.150110
N
0.749
estExt_fgenesh1_pg.C_930051
Physcomitrella patens
estExt_fgenesh1_pg.C_930051
N
0.696
Eucgr.K02136
Eucalyptus grandis
Eucgr.K02136
N
0.704
evm.TU.supercontig_21.106
Carica papaya
evm.TU.supercontig_21.106
N
0.765
e_gw1.317.27.1
Physcomitrella patens
e_gw1.317.27.1
N
0.726
F775_30629
Aegilops tauschii
F775_30629
N
0.706
GLYMA08G46250
Glycine max
GLYMA08G46250
N
0.763
GLYMA18G33460
Glycine max
GLYMA18G33460
N
0.761
Gorai.001G105100
Gossypium raimondii
Gorai.001G105100
N
0.765
Gorai.001G188300
Gossypium raimondii
Gorai.001G188300
N
0.758
Gorai.001G231300
Gossypium raimondii
Gorai.001G231300
N
0.765
Gorai.007G156300
Gossypium raimondii
Gorai.007G156300
N
0.762
GSMUA_Achr6G06510_001
Musa acuminata
GSMUA_Achr6G06510_001
N
0.703
GSMUA_Achr8G00300_001
Musa acuminata
GSMUA_Achr8G00300_001
N
0.738
GSMUA_Achr9G01590_001
Musa acuminata
GSMUA_Achr9G01590_001
N
0.755
LPERR02G13930
Leersia perrieri
LPERR02G13930
N
0.786
Lus10011836.g
Linum usitatissimum
Lus10011836.g
N
0.768
Lus10022769.g
Linum usitatissimum
Lus10022769.g
N
0.768
MDP0000129941
Malus domestica
MDP0000129941
N
0.758
MDP0000300382
Malus domestica
MDP0000300382
N
0.758
MDP0000675982
Malus domestica
MDP0000675982
N
0.758
mgf003491m
Mimulus guttatus
mgf003491m
N
0.765
mgf003727m
Mimulus guttatus
mgf003727m
N
0.712
mgf007349m
Mimulus guttatus
mgf007349m
N
0.765
MTR_7g055857
Medicago truncatula
MTR_7g055857
N
0.742
MTR_8g012655
Medicago truncatula
MTR_8g012655
N
0.748
OB02G25330
Oryza brachyantha
OB02G25330
N
0.786
OBART02G17450
Oryza barthii
OBART02G17450
N
0.786
OLONG_009588
Oryza longistaminata
OLONG_009588
N
0.770
ONIVA02G18870
Oryza nivara
ONIVA02G18870
N
0.786
OPUNC02G15530
Oryza punctata
OPUNC02G15530
N
0.786
orange1.1g025914m.g
Citrus sinensis
orange1.1g025914m.g
N
0.765
ORGLA02G0152600
Oryza glaberrima
ORGLA02G0152600
N
0.786
ORUFI02G18290
Oryza rufipogon
ORUFI02G18290
N
0.786
OS02G0499000
Oryza sativa
OS02G0499000
N
0.786
Pavir.Aa01947
Panicum virgatum
Pavir.Aa01947
N
0.780
Pavir.J28064
Panicum virgatum
Pavir.J28064
N
0.780
PDK_20s1512801g001
Phoenix dactylifera
PDK_20s1512801g001
N
0.697
PGSC0003DMG400017485
Solanum tuberosum
PGSC0003DMG400017485
N
0.779
PK01824.1
Cannabis sativa
PK01824.1
N
0.743
Pm020315
Prunus mume
Pm020315
N
0.765
POPTR_0002s24750
Populus trichocarpa
POPTR_0002s24750
N
0.765
PRUPE_ppa011812mg
Prunus persica
PRUPE_ppa011812mg
N
0.765
Sb04g020150
Sorghum bicolor
Sb04g020150
N
0.780
SELMODRAFT_420254
Selaginella moellendorffii
SELMODRAFT_420254
N
0.735
SELMODRAFT_443366
Selaginella moellendorffii
SELMODRAFT_443366
N
0.735
Si018306m.g
Setaria italica
Si018306m.g
N
0.780
Solyc09g059510.2
Solanum lycopersicum
Solyc09g059510.2
N
0.779
TCM_002835
Theobroma cacao
TCM_002835
N
0.765
Thhalv10026242m.g
Eutrema salsugineum
Thhalv10026242m.g
N
0.715
Traes_6AL_13895C140
Triticum aestivum
Traes_6AL_13895C140
N
0.780
Traes_6DS_43372C0A6
Triticum aestivum
Traes_6DS_43372C0A6
N
0.780
TRIUR3_27883
Triticum urartu
TRIUR3_27883
N
0.706
VIT_00s0184g00010
Vitis vinifera
VIT_00s0184g00010
N
0.749