CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OS03G0263000
(
Oryza sativa
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
OS03G0263000
T004159_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF014
M06581_2.00
Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR
Dap-seq
OMalley et al.(2016)
AT1G44830_col_a
0.704
0.824
ERF012
M06570_2.00
Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN
Dap-seq
OMalley et al.(2016)
DREB26_col_a
0.690
0.784
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS03T0263000-01
AP2
48
99
RPYKGVRMRSWGSWVSEIRAPHQKRRIWLGSYATPEAAARAYDAALLCLKGS
Links
Other
AP2
family TFs
Other
Oryza sativa
TFs
115 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29908.m005953
Ricinus communis
29908.m005953
I
0.000
ARF17
Arabidopsis thaliana
AT1G77850
N
0.000
Bo6g081980
Brassica oleracea
Bo6g081980
N
0.000
Bo6g121520
Brassica oleracea
Bo6g121520
N
0.000
Bostr.20129s0222
Boechera stricta
Bostr.20129s0222
N
0.000
Bra003665
Brassica rapa
Bra003665
N
0.000
Bra015651
Brassica rapa
Bra015651
N
0.000
BRADI5G27400
Brachypodium distachyon
BRADI5G27400
N
0.000
Cagra.0096s0050
Capsella grandiflora
Cagra.0096s0050
N
0.000
Cagra.24523s0002
Capsella grandiflora
Cagra.24523s0002
N
0.000
Carubv10019991m.g
Capsella rubella
Carubv10019991m.g
N
0.000
cassava36161.valid.m1
Manihot esculenta
cassava36161.valid.m1
I
0.000
chr1.LjT31L11.90.nd
Lotus japonicus
chr1.LjT31L11.90.nd
I
0.000
Ciclev10000693m.g
Citrus clementina
Ciclev10000693m.g
I
0.000
Cla022413
Citrullus lanatus
Cla022413
I
0.000
Cucsa.381330
Cucumis sativus
Cucsa.381330
I
0.000
Eucgr.F04380
Eucalyptus grandis
Eucgr.F04380
I
0.000
evm.TU.supercontig_49.122
Carica papaya
evm.TU.supercontig_49.122
I
0.000
gene02234-v1.0-hybrid
Fragaria vesca
gene02234-v1.0-hybrid
I
0.000
gene16050-v1.0-hybrid
Fragaria vesca
gene16050-v1.0-hybrid
N
0.000
GLYMA04G43350
Glycine max
GLYMA04G43350
N
0.000
GLYMA13G02410
Glycine max
GLYMA13G02410
N
0.000
Gorai.009G241900
Gossypium raimondii
Gorai.009G241900
I
0.000
Gorai.010G046000
Gossypium raimondii
Gorai.010G046000
I
0.000
GSMUA_Achr9G29480_001
Musa acuminata
GSMUA_Achr9G29480_001
I
0.000
Lus10009770.g
Linum usitatissimum
Lus10009770.g
N
0.000
Lus10024753.g
Linum usitatissimum
Lus10024753.g
N
0.000
Lus10024754.g
Linum usitatissimum
Lus10024754.g
N
0.000
MDP0000232116
Malus domestica
MDP0000232116
N
0.000
MDP0000256621
Malus domestica
MDP0000256621
I
0.000
MTR_3g073420
Medicago truncatula
MTR_3g073420
N
0.000
orange1.1g008078m.g
Citrus sinensis
orange1.1g008078m.g
I
0.000
PGSC0003DMG400027798
Solanum tuberosum
PGSC0003DMG400027798
N
0.000
Pm019126
Prunus mume
Pm019126
I
0.000
POPTR_0002s09050
Populus trichocarpa
POPTR_0002s09050
I
0.000
POPTR_0005s16320
Populus trichocarpa
POPTR_0005s16320
I
0.000
PRUPE_ppa003136mg
Prunus persica
PRUPE_ppa003136mg
I
0.000
SapurV1A.0010s0540
Salix purpurea
SapurV1A.0010s0540
I
0.000
SapurV1A.0331s0130
Salix purpurea
SapurV1A.0331s0130
I
0.000
Solyc11g013480.1
Solanum lycopersicum
Solyc11g013480.1
N
0.000
TCM_035002
Theobroma cacao
TCM_035002
I
0.000
Thhalv10018331m.g
Eutrema salsugineum
Thhalv10018331m.g
N
0.000
Traes_2AL_C70217249
Triticum aestivum
Traes_2AL_C70217249
N
0.000