Bostr.26833s0077 (Boechera stricta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Bostr.26833s0077 T007629_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF106
M01628_2.00 		Arabidopsis thaliana
NNNVCRVCN
NGBYGBNNN		 PBM
Weirauch et al.(2014)
pTH7426 		0.879 0.961
ERF104
M06682_2.00 		Arabidopsis thaliana
NNHHDYMDCCGCCGCCRYH
DRYGGCGGCGGHKRHDDNN		 Dap-seq
OMalley et al.(2016)
ERF104_col_a 		0.793 0.784
ERF104
M06683_2.00 		Arabidopsis thaliana
BHDSCGCCGCCRYHD
HDRYGGCGGCGSHDV		 Dap-seq
OMalley et al.(2016)
ERF104_colamp_a 		0.793 0.784
ERF105
M01632_2.00 		Arabidopsis thaliana
CGCCGGCM
KGCCGGCG		 PBM
Weirauch et al.(2014)
pTH7233 		0.788 0.784
ERF105
M06676_2.00 		Arabidopsis thaliana
NHNNNNNNNNHNNHDBCGCCGCCR
YGGCGGCGVHDNNDNNNNNNNNDN		 Dap-seq
OMalley et al.(2016)
ERF105_colamp_a 		0.788 0.784
ERF105
M06677_2.00 		Arabidopsis thaliana
HDSCGCCGCCRYHDH
DHDRYGGCGGCGSHD		 Dap-seq
OMalley et al.(2016)
ERF105_col 		0.788 0.784
PK02330.1
M01095_2.00 		Cannabis sativa
NNNGCCGBCN
NGVCGGCNNN		 PBM
Lambert et al.(2019)
pTH10093 		0.773 0.804
ERF5
M00721_2.00 		Arabidopsis thaliana
NNNGSMRNMN
NKNYKSCNNN		 PBM
Chang et al.(2013)
pTH7197 		0.762 0.784
ERF5
M06674_2.00 		Arabidopsis thaliana
YCDYCKCCGCCGYCD
HGRCGGCGGMGRHGR		 Dap-seq
OMalley et al.(2016)
ERF5_col_a 		0.762 0.784
ERF5
M06675_2.00 		Arabidopsis thaliana
NHDBCGCCGCCRYHDNHDNNN
NNNHDNHDRYGGCGGCGVHDN		 Dap-seq
OMalley et al.(2016)
ERF5_colamp_a 		0.762 0.784
ERF5_TOBAC
M09729_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF4_02 		0.757 0.765
ERF14
M01045_2.00 		Arabidopsis thaliana
NVGCCGNCN
NGNCGGCBN		 PBM
Sullivan et al.(2014)
pTH9793 		0.742 0.686
ERF2
M01631_2.00 		Arabidopsis thaliana
NNNGCCGNCN
NGNCGGCNNN		 PBM
Weirauch et al.(2014)
pTH8113 		0.723 0.706
ERF2
M06672_2.00 		Arabidopsis thaliana
HHNHHNYHDYCGCCGCCRYND
HNRYGGCGGCGRHDRNDDNDD		 Dap-seq
OMalley et al.(2016)
ERF2_col_a 		0.723 0.706
ERF2
M06673_2.00 		Arabidopsis thaliana
NNNNNNNHNNHDSMGCCGCCR
YGGCGGCKSHDNNDNNNNNNN		 Dap-seq
OMalley et al.(2016)
ERF2_colamp_a 		0.723 0.706
ERF1A
M00848_2.00 		Arabidopsis thaliana
NNNNRNN
NNYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ATERF1 		0.721 0.706
ERF1A
M00720_2.00 		Arabidopsis thaliana
NMGCCRNCN
NGNYGGCKN		 PBM
Chang et al.(2013)
pTH7202 		0.721 0.706
ERF095
M06624_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRYHD
HDRYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ESE1_col_a 		0.718 0.686
ERF095
M06625_2.00 		Arabidopsis thaliana
YHNYYDYHDCCGCCGCCDYH
DRHGGCGGCGGHDRHRRNDR		 Dap-seq
OMalley et al.(2016)
ESE1_colamp_a 		0.718 0.686
ERF7
M01617_2.00 		Arabidopsis thaliana
NGCCGNMNNN
NNNKNCGGCN		 PBM
Weirauch et al.(2014)
pTH7606 		0.707 0.725
ERF7
M06620_2.00 		Arabidopsis thaliana
YHNHYNYYDYCDCCGCCGYCD
HGRCGGCGGHGRHRRNRDNDR		 Dap-seq
OMalley et al.(2016)
ERF7_col_a 		0.707 0.725
ERF7
M06621_2.00 		Arabidopsis thaliana
NNNHNNHNHHDSCGCCGCCRH
DYGGCGGCGSHDDNDNNDNNN		 Dap-seq
OMalley et al.(2016)
ERF7_colamp_a 		0.707 0.725
ERF096
M01630_2.00 		Arabidopsis thaliana
NVGCCGNCNN
NNGNCGGCBN		 PBM
Weirauch et al.(2014)
pTH7909 		0.699 0.667
Q2TN80_WHEAT
M09715_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_02 		0.698 0.627
ERF6
M01621_2.00 		Arabidopsis thaliana
NNGCCGGCVN
NBGCCGGCNN		 PBM
Weirauch et al.(2014)
pTH7228 		0.693 0.745
ERF6
M06637_2.00 		Arabidopsis thaliana
NHNHHDCCGCCGCCRYHDHHN
NDDHDRYGGCGGCGGHDDNDN		 Dap-seq
OMalley et al.(2016)
ERF6_col 		0.693 0.745
ERF1B
M01619_2.00 		Arabidopsis thaliana
NMGCCGCCRN
NYGGCGGCKN		 PBM
Weirauch et al.(2014)
pTH8795 		0.680 0.706
ERF1B
M06626_2.00 		Arabidopsis thaliana
NHNNHDYMGCCGCCRYHDNHDNNNNNNN
NNNNNNNHDNHDRYGGCGGCKRHDNNDN		 Dap-seq
OMalley et al.(2016)
ERF1_col_a 		0.680 0.706
ERF1B
M06627_2.00 		Arabidopsis thaliana
MGCCGCCD
HGGCGGCK		 Dap-seq
OMalley et al.(2016)
ERF1_colamp_a 		0.680 0.706
ERF1B
M09703_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_Q2_01 		0.680 0.706
ERF1B
M09704_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_Q2 		0.680 0.706
A4F248_TOBAC
M09725_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRAF1_01 		0.679 0.667
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.26833s0077.1.p AP2 116 168

Links

Other AP2 family TFs
Other Boechera stricta TFs

906 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27904.m000217 Ricinus communis 27904.m000217 I
29640.m000403 Ricinus communis 29640.m000403 I
30190.m011323 Ricinus communis 30190.m011323 I
AMTR_s00002p00264660 Amborella trichopoda AMTR_s00002p00264660 I
AMTR_s00077p00176570 Amborella trichopoda AMTR_s00077p00176570 I
Aquca_017_00628 Aquilegia coerulea Aquca_017_00628 I
Aquca_027_00311 Aquilegia coerulea Aquca_027_00311 I
Aquca_036_00073 Aquilegia coerulea Aquca_036_00073 I
ATERF-7 Arabidopsis lyrata fgenesh2_kg.3__2255__AT3G20310.1 I
Bo1g108970 Brassica oleracea Bo1g108970 I
Bo3g066710 Brassica oleracea Bo3g066710 I
Bo3g074840 Brassica oleracea Bo3g074840 I
Bo3g143340 Brassica oleracea Bo3g143340 I
Bo5g055840 Brassica oleracea Bo5g055840 I
Bo5g109800 Brassica oleracea Bo5g109800 I
Bo6g022410 Brassica oleracea Bo6g022410 I
Bo7g048190 Brassica oleracea Bo7g048190 I
Bostr.15697s0156 Boechera stricta Bostr.15697s0156 I
Bostr.19424s0625 Boechera stricta Bostr.19424s0625 I
Bostr.26675s0113 Boechera stricta Bostr.26675s0113 I
Bostr.26675s0388 Boechera stricta Bostr.26675s0388 I 0.692
Bostr.28625s0184 Boechera stricta Bostr.28625s0184 I
Bra001588 Brassica rapa Bra001588 I
Bra001784 Brassica rapa Bra001784 I
Bra010881 Brassica rapa Bra010881 I
Bra018864 Brassica rapa Bra018864 I 0.706
Bra030094 Brassica rapa Bra030094 I
Bra032898 Brassica rapa Bra032898 I
Bra035792 Brassica rapa Bra035792 I
Bra038261 Brassica rapa Bra038261 I
Bra039658 Brassica rapa Bra039658 I
BRADI2G21067 Brachypodium distachyon BRADI2G21067 I
BRADI2G52380 Brachypodium distachyon BRADI2G52380 I
BRADI3G06562 Brachypodium distachyon BRADI3G06562 I 0.686
Cagra.0316s0033 Capsella grandiflora Cagra.0316s0033 I
Cagra.0952s0001 Capsella grandiflora Cagra.0952s0001 I
Cagra.1822s0023 Capsella grandiflora Cagra.1822s0023 I
Carubv10010284m.g Capsella rubella Carubv10010284m.g I
Carubv10011585m.g Capsella rubella Carubv10011585m.g I
Carubv10014475m.g Capsella rubella Carubv10014475m.g I
cassava34729.m1 Manihot esculenta cassava34729.m1 I
cassava37846.valid.m1 Manihot esculenta cassava37846.valid.m1 I
cassava42971.valid.m1 Manihot esculenta cassava42971.valid.m1 I
cassava43266.valid.m1 Manihot esculenta cassava43266.valid.m1 I
cassava4486.m1 Manihot esculenta cassava4486.m1 I
cassava6588.valid.m1 Manihot esculenta cassava6588.valid.m1 I
Ca_00326 Cicer arietinum Ca_00326 I
Ca_12205 Cicer arietinum Ca_12205 I
Ca_17824 Cicer arietinum Ca_17824 I
Ca_20544 Cicer arietinum Ca_20544 I
Ca_22534 Cicer arietinum Ca_22534 I
chr1.CM0375.170.nd Lotus japonicus chr1.CM0375.170.nd I
chr2.LjT24P12.30.nd Lotus japonicus chr2.LjT24P12.30.nd I
chr3.CM0080.270.nc Lotus japonicus chr3.CM0080.270.nc I
chr6.CM0114.130.nc Lotus japonicus chr6.CM0114.130.nc I
Ciclev10009361m.g Citrus clementina Ciclev10009361m.g I
Ciclev10009484m.g Citrus clementina Ciclev10009484m.g I
Ciclev10016668m.g Citrus clementina Ciclev10016668m.g I
Ciclev10016982m.g Citrus clementina Ciclev10016982m.g I
Cla003319 Citrullus lanatus Cla003319 I
Cla005423 Citrullus lanatus Cla005423 I
Cla013723 Citrullus lanatus Cla013723 I
Cla020002 Citrullus lanatus Cla020002 I
Cucsa.042770 Cucumis sativus Cucsa.042770 I
Cucsa.126860 Cucumis sativus Cucsa.126860 I
Cucsa.139820 Cucumis sativus Cucsa.139820 I
Cucsa.190200 Cucumis sativus Cucsa.190200 I
ERF12 Arabidopsis thaliana AT1G28360 I
ERF12 Arabidopsis lyrata fgenesh2_kg.1__3004__AT1G28360.1 I
ERF12 Vitis vinifera VIT_10s0003g00130 I
ERF3 Arabidopsis thaliana AT1G50640 D
ERF3 Arabidopsis lyrata fgenesh2_kg.1__4150__AT1G50640.1 I
ERF7 Arabidopsis thaliana AT3G20310 D 0.707
estExt_fgeneshCV_pg.C_120242 Chlorella vulgaris estExt_fgeneshCV_pg.C_120242 I
estExt_Genemark1.C_100079 Coccomyxa subellipsoidea C169 estExt_Genemark1.C_100079 I
estExt_gwp_gw1.C_1270048 Physcomitrella patens estExt_gwp_gw1.C_1270048 I
Eucgr.A01091 Eucalyptus grandis Eucgr.A01091 I
Eucgr.G00002 Eucalyptus grandis Eucgr.G00002 I 0.678
Eucgr.K00734 Eucalyptus grandis Eucgr.K00734 I
evm.TU.supercontig_12.251 Carica papaya evm.TU.supercontig_12.251 I
evm.TU.supercontig_131.83 Carica papaya evm.TU.supercontig_131.83 I
evm.TU.supercontig_132.31 Carica papaya evm.TU.supercontig_132.31 I
evm.TU.supercontig_27.18 Carica papaya evm.TU.supercontig_27.18 I
evm.TU.supercontig_44.73 Carica papaya evm.TU.supercontig_44.73 I
e_gw1.124.59.1 Physcomitrella patens e_gw1.124.59.1 I
fgenesh1_pg.scaffold_6000034 Physcomitrella patens fgenesh1_pg.scaffold_6000034 I
fgenesh2_kg.3__2537__AT3G23220.1 Arabidopsis lyrata fgenesh2_kg.3__2537__AT3G23220.1 I 0.726
gene01152-v1.0-hybrid Fragaria vesca gene01152-v1.0-hybrid I
gene03450-v1.0-hybrid Fragaria vesca gene03450-v1.0-hybrid I 0.695
gene21403-v1.0-hybrid Fragaria vesca gene21403-v1.0-hybrid I
gene29735-v1.0-hybrid Fragaria vesca gene29735-v1.0-hybrid I
GLYMA02G43500 Glycine max GLYMA02G43500 I
GLYMA02G46340 Glycine max GLYMA02G46340 I 0.686
GLYMA03G31640 Glycine max GLYMA03G31640 I
GLYMA06G44430 Glycine max GLYMA06G44430 I 0.689
GLYMA08G43300 Glycine max GLYMA08G43300 I
GLYMA12G13315 Glycine max GLYMA12G13315 I 0.691
GLYMA12G26836 Glycine max GLYMA12G26836 I
GLYMA13G31010 Glycine max GLYMA13G31010 I
GLYMA14G02360 Glycine max GLYMA14G02360 I 0.690
GLYMA14G05470 Glycine max GLYMA14G05470 I
GLYMA15G08360 Glycine max GLYMA15G08360 I
GLYMA18G10290 Glycine max GLYMA18G10290 I
Gorai.002G092900 Gossypium raimondii Gorai.002G092900 I
Gorai.004G032500 Gossypium raimondii Gorai.004G032500 I
Gorai.007G312200 Gossypium raimondii Gorai.007G312200 I 0.691
Gorai.009G375700 Gossypium raimondii Gorai.009G375700 I
Gorai.009G443400 Gossypium raimondii Gorai.009G443400 I
Gorai.011G029700 Gossypium raimondii Gorai.011G029700 I
Gorai.013G169500 Gossypium raimondii Gorai.013G169500 I
GRMZM2G020150 Zea mays GRMZM2G020150 I 0.695
GRMZM2G079653 Zea mays GRMZM2G079653 I 0.685
GRMZM2G146028 Zea mays GRMZM2G146028 I 0.686
GRMZM2G174347 Zea mays GRMZM2G174347 I 0.694
GSMUA_Achr1G18230_001 Musa acuminata GSMUA_Achr1G18230_001 I
GSMUA_Achr3G13010_001 Musa acuminata GSMUA_Achr3G13010_001 I 0.691
GSMUA_Achr3G29290_001 Musa acuminata GSMUA_Achr3G29290_001 I
GSMUA_Achr4G04060_001 Musa acuminata GSMUA_Achr4G04060_001 I
GSMUA_Achr4G06170_001 Musa acuminata GSMUA_Achr4G06170_001 I
GSMUA_Achr4G06660_001 Musa acuminata GSMUA_Achr4G06660_001 I
GSMUA_Achr4G11430_001 Musa acuminata GSMUA_Achr4G11430_001 I
GSMUA_Achr5G09940_001 Musa acuminata GSMUA_Achr5G09940_001 I
GSMUA_Achr6G00240_001 Musa acuminata GSMUA_Achr6G00240_001 I
GSMUA_Achr6G01440_001 Musa acuminata GSMUA_Achr6G01440_001 I
GSMUA_Achr9G11480_001 Musa acuminata GSMUA_Achr9G11480_001 I
GSMUA_AchrUn_randomG06910_001 Musa acuminata GSMUA_AchrUn_randomG06910_001 I
gw1.105.71.1 Physcomitrella patens gw1.105.71.1 I
gw1.90.191.1 Physcomitrella patens gw1.90.191.1 I
LPERR02G05920 Leersia perrieri LPERR02G05920 I 0.684
Lus10029987.g Linum usitatissimum Lus10029987.g I
Lus10031526.g Linum usitatissimum Lus10031526.g I
Lus10035076.g Linum usitatissimum Lus10035076.g I 0.705
Lus10035329.g Linum usitatissimum Lus10035329.g I
Lus10043182.g Linum usitatissimum Lus10043182.g I
MDP0000236605 Malus domestica MDP0000236605 I
MDP0000243113 Malus domestica MDP0000243113 I
MDP0000310904 Malus domestica MDP0000310904 I
MDP0000457509 Malus domestica MDP0000457509 I
MDP0000542633 Malus domestica MDP0000542633 I
MDP0000629527 Malus domestica MDP0000629527 I
MDP0000744693 Malus domestica MDP0000744693 I
MDP0000839828 Malus domestica MDP0000839828 I
mgf007166m Mimulus guttatus mgf007166m I
mgf016282m Mimulus guttatus mgf016282m I
mgf023367m Mimulus guttatus mgf023367m I
MLOC_66843 Hordeum vulgare MLOC_66843 I
MTR_2g014300 Medicago truncatula MTR_2g014300 I
OGLUM02G06860 Oryza glumaepatula OGLUM02G06860 I 0.685
OMERI02G07840 Oryza meridionalis OMERI02G07840 I 0.685
OPUNC02G05940 Oryza punctata OPUNC02G05940 I 0.684
orange1.1g027990m.g Citrus sinensis orange1.1g027990m.g I
orange1.1g028454m.g Citrus sinensis orange1.1g028454m.g I
orange1.1g030994m.g Citrus sinensis orange1.1g030994m.g I
orange1.1g045783m.g Citrus sinensis orange1.1g045783m.g I
ORGLA02G0063000 Oryza glaberrima ORGLA02G0063000 I 0.685
ORUFI02G06880 Oryza rufipogon ORUFI02G06880 I 0.685
Pavir.Aa03102 Panicum virgatum Pavir.Aa03102 I 0.686
Pavir.Ab00660 Panicum virgatum Pavir.Ab00660 I 0.686
Pavir.Eb03165 Panicum virgatum Pavir.Eb03165 I
Pavir.Fa01730 Panicum virgatum Pavir.Fa01730 I
Pavir.Fb00952 Panicum virgatum Pavir.Fb00952 I
Pavir.Fb01486 Panicum virgatum Pavir.Fb01486 I
PGSC0003DMG400000681 Solanum tuberosum PGSC0003DMG400000681 I
PGSC0003DMG400014417 Solanum tuberosum PGSC0003DMG400014417 I
PGSC0003DMG400022305 Solanum tuberosum PGSC0003DMG400022305 I
PGSC0003DMG400029713 Solanum tuberosum PGSC0003DMG400029713 I
PK02998.1 Cannabis sativa PK02998.1 I
PK17878.1 Cannabis sativa PK17878.1 D
PK25211.1 Cannabis sativa PK25211.1 I
Pm010083 Prunus mume Pm010083 I
Pm014953 Prunus mume Pm014953 I
Pm020210 Prunus mume Pm020210 I
POPTR_0001s36610 Populus trichocarpa POPTR_0001s36610 I
POPTR_0001s40770 Populus trichocarpa POPTR_0001s40770 I
POPTR_0002s04430 Populus trichocarpa POPTR_0002s04430 I
POPTR_0004s04700 Populus trichocarpa POPTR_0004s04700 I
POPTR_0005s24110 Populus trichocarpa POPTR_0005s24110 I
POPTR_0011s05570 Populus trichocarpa POPTR_0011s05570 I
POPTR_0011s11620 Populus trichocarpa POPTR_0011s11620 I
PRUPE_ppa010804mg Prunus persica PRUPE_ppa010804mg I
PRUPE_ppa010893mg Prunus persica PRUPE_ppa010893mg I
PRUPE_ppa012385mg Prunus persica PRUPE_ppa012385mg I
PRUPE_ppa022435mg Prunus persica PRUPE_ppa022435mg I
SapurV1A.0012s0570 Salix purpurea SapurV1A.0012s0570 I
SapurV1A.0032s0450 Salix purpurea SapurV1A.0032s0450 I
SapurV1A.0126s0320 Salix purpurea SapurV1A.0126s0320 I
SapurV1A.0126s0330 Salix purpurea SapurV1A.0126s0330 I
SapurV1A.1325s0040 Salix purpurea SapurV1A.1325s0040 I
Sb03g037085 Sorghum bicolor Sb03g037085 I
Sb04g006080 Sorghum bicolor Sb04g006080 I 0.686
SELMODRAFT_129122 Selaginella moellendorffii SELMODRAFT_129122 I
SELMODRAFT_17648 Selaginella moellendorffii SELMODRAFT_17648 I
SELMODRAFT_19889 Selaginella moellendorffii SELMODRAFT_19889 I
SELMODRAFT_430375 Selaginella moellendorffii SELMODRAFT_430375 I
SELMODRAFT_443461 Selaginella moellendorffii SELMODRAFT_443461 I
SELMODRAFT_49950 Selaginella moellendorffii SELMODRAFT_49950 I
SELMODRAFT_59974 Selaginella moellendorffii SELMODRAFT_59974 I
SELMODRAFT_73142 Selaginella moellendorffii SELMODRAFT_73142 I
Si003053m.g Setaria italica Si003053m.g I
Solyc02g077840.1 Solanum lycopersicum Solyc02g077840.1 I
Solyc07g049490.1 Solanum lycopersicum Solyc07g049490.1 I
Solyc07g064890.1 Solanum lycopersicum Solyc07g064890.1 I
Solyc10g006130.1 Solanum lycopersicum Solyc10g006130.1 I
TCM_029823 Theobroma cacao TCM_029823 I
TCM_030804 Theobroma cacao TCM_030804 I
TCM_031608 Theobroma cacao TCM_031608 I
Thhalv10009947m.g Eutrema salsugineum Thhalv10009947m.g I
Thhalv10011689m.g Eutrema salsugineum Thhalv10011689m.g I
Thhalv10021393m.g Eutrema salsugineum Thhalv10021393m.g I 0.695
TRAES3BF075600040CFD_g Triticum aestivum TRAES3BF075600040CFD_g I
VIT_07s0141g00690 Vitis vinifera VIT_07s0141g00690 I
VIT_12s0059g01460 Vitis vinifera VIT_12s0059g01460 I
VIT_14s0081g00520 Vitis vinifera VIT_14s0081g00520 I
VIT_19s0090g01080 Vitis vinifera VIT_19s0090g01080 I