AMTR_s00077p00176570 (Amborella trichopoda)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AMTR_s00077p00176570 T000380_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF3
M01607_2.00 		Arabidopsis thaliana
CGCCGSCR
YGSCGGCG		 PBM
Weirauch et al.(2014)
pTH8109 		0.705 0.872
ERF3
M06584_2.00 		Arabidopsis thaliana
YHDYCKCCGCCGYHD
HDRCGGCGGMGRHDR		 Dap-seq
OMalley et al.(2016)
ERF3_col_a 		0.705 0.872
ERF3
M06585_2.00 		Arabidopsis thaliana
NNHHDNHNNYDCCGCCGYCR
YGRCGGCGGHRNNDNHDDNN		 Dap-seq
OMalley et al.(2016)
ERF3_colamp_a 		0.705 0.872
PK17878.1
M01099_2.00 		Cannabis sativa
CGCCGYCR
YGRCGGCG		 PBM
Lambert et al.(2019)
pTH10133 		0.690 0.809
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN04288 AP2 37 88

Links

Other AP2 family TFs
Other Amborella trichopoda TFs

141 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_AchrUn_randomG06910_001 Musa acuminata GSMUA_AchrUn_randomG06910_001 I 0.732
Thhalv10011689m.g Eutrema salsugineum Thhalv10011689m.g I 0.717
Pavir.Gb00092 Panicum virgatum Pavir.Gb00092 I 0.714
Pavir.Ga00187 Panicum virgatum Pavir.Ga00187 I 0.714
Si023330m.g Setaria italica Si023330m.g I 0.714
VIT_19s0090g01080 Vitis vinifera VIT_19s0090g01080 I 0.712
OMERI04G24480 Oryza meridionalis OMERI04G24480 I 0.712
OS04G0669200 Oryza sativa OS04G0669200 I 0.712
ONIVA04G27460 Oryza nivara ONIVA04G27460 I 0.712
ORUFI04G30650 Oryza rufipogon ORUFI04G30650 I 0.712
BGIOSGA014134 Oryza indica BGIOSGA014134 I 0.712
OGLUM04G28860 Oryza glumaepatula OGLUM04G28860 I 0.712
GLYMA03G31640 Glycine max GLYMA03G31640 I 0.710
Carubv10010284m.g Capsella rubella Carubv10010284m.g I 0.710
AMTR_s00002p00264660 Amborella trichopoda AMTR_s00002p00264660 I 0.710
Cagra.0952s0001 Capsella grandiflora Cagra.0952s0001 I 0.710
orange1.1g027990m.g Citrus sinensis orange1.1g027990m.g I 0.709
Ciclev10016668m.g Citrus clementina Ciclev10016668m.g I 0.709
TCM_030804 Theobroma cacao TCM_030804 I 0.709
VIT_12s0059g01460 Vitis vinifera VIT_12s0059g01460 I 0.709
Pm014953 Prunus mume Pm014953 I 0.708
mgf016282m Mimulus guttatus mgf016282m I 0.708
PRUPE_ppa010804mg Prunus persica PRUPE_ppa010804mg I 0.708
MDP0000839828 Malus domestica MDP0000839828 I 0.708
gene01152-v1.0-hybrid Fragaria vesca gene01152-v1.0-hybrid I 0.708
mgf007166m Mimulus guttatus mgf007166m I 0.707
evm.TU.supercontig_12.251 Carica papaya evm.TU.supercontig_12.251 I 0.707
GSMUA_Achr3G29290_001 Musa acuminata GSMUA_Achr3G29290_001 I 0.707
GSMUA_Achr4G06660_001 Musa acuminata GSMUA_Achr4G06660_001 I 0.707
VIT_07s0141g00690 Vitis vinifera VIT_07s0141g00690 I 0.706
GSMUA_Achr5G09940_001 Musa acuminata GSMUA_Achr5G09940_001 I 0.706
cassava6588.valid.m1 Manihot esculenta cassava6588.valid.m1 I 0.706
VIT_14s0081g00520 Vitis vinifera VIT_14s0081g00520 I 0.705
Bra021594 Brassica rapa Bra021594 I 0.705
ERF3 Arabidopsis thaliana AT1G50640 D 0.705
gw1.105.71.1 Physcomitrella patens gw1.105.71.1 I 0.705
PK02998.1 Cannabis sativa PK02998.1 I 0.704
Gorai.002G092900 Gossypium raimondii Gorai.002G092900 I 0.702
PK25211.1 Cannabis sativa PK25211.1 I 0.701
Solyc07g064890.1 Solanum lycopersicum Solyc07g064890.1 I 0.700
Bo1g129710 Brassica oleracea Bo1g129710 I 0.700
Aquca_027_00311 Aquilegia coerulea Aquca_027_00311 I 0.699
Ca_12205 Cicer arietinum Ca_12205 I 0.699
Ciclev10009361m.g Citrus clementina Ciclev10009361m.g I 0.699
orange1.1g045783m.g Citrus sinensis orange1.1g045783m.g I 0.699
PRUPE_ppa022435mg Prunus persica PRUPE_ppa022435mg I 0.698
Pm020210 Prunus mume Pm020210 I 0.698
Cla013723 Citrullus lanatus Cla013723 I 0.698
POPTR_0002s04430 Populus trichocarpa POPTR_0002s04430 I 0.697
e_gw1.124.59.1 Physcomitrella patens e_gw1.124.59.1 I 0.697
estExt_gwp_gw1.C_1270048 Physcomitrella patens estExt_gwp_gw1.C_1270048 I 0.697
gw1.90.191.1 Physcomitrella patens gw1.90.191.1 I 0.696
chr1.CM0375.170.nd Lotus japonicus chr1.CM0375.170.nd I 0.696
BRADI5G25570 Brachypodium distachyon BRADI5G25570 I 0.696
Solyc10g006130.1 Solanum lycopersicum Solyc10g006130.1 I 0.696
Si010228m.g Setaria italica Si010228m.g I 0.696
Sb06g028090 Sorghum bicolor Sb06g028090 I 0.696
Pavir.Gb00545 Panicum virgatum Pavir.Gb00545 I 0.696
GRMZM2G068967 Zea mays GRMZM2G068967 I 0.696
GRMZM2G438202 Zea mays GRMZM2G438202 I 0.696
Pavir.Ga00485 Panicum virgatum Pavir.Ga00485 I 0.696
evm.TU.supercontig_132.31 Carica papaya evm.TU.supercontig_132.31 I 0.695
POPTR_0005s24110 Populus trichocarpa POPTR_0005s24110 I 0.695
Pm011907 Prunus mume Pm011907 I 0.694
chr2.LjT24P12.30.nd Lotus japonicus chr2.LjT24P12.30.nd I 0.694
MDP0000629527 Malus domestica MDP0000629527 I 0.694
MDP0000542633 Malus domestica MDP0000542633 I 0.694
BRADI5G21250 Brachypodium distachyon BRADI5G21250 I 0.693
Ca_17824 Cicer arietinum Ca_17824 I 0.693
GSMUA_Achr6G01440_001 Musa acuminata GSMUA_Achr6G01440_001 I 0.693
PGSC0003DMG400022305 Solanum tuberosum PGSC0003DMG400022305 I 0.692
POPTR_0001s36610 Populus trichocarpa POPTR_0001s36610 I 0.691
Cucsa.139820 Cucumis sativus Cucsa.139820 I 0.691
orange1.1g030994m.g Citrus sinensis orange1.1g030994m.g I 0.690
Cucsa.126860 Cucumis sativus Cucsa.126860 I 0.690
SapurV1A.0032s0450 Salix purpurea SapurV1A.0032s0450 I 0.690
SapurV1A.0012s0570 Salix purpurea SapurV1A.0012s0570 I 0.690
Gorai.011G029700 Gossypium raimondii Gorai.011G029700 I 0.690
mgf023367m Mimulus guttatus mgf023367m I 0.690
Aquca_017_00628 Aquilegia coerulea Aquca_017_00628 I 0.690
Ciclev10016982m.g Citrus clementina Ciclev10016982m.g I 0.690
Bostr.26675s0113 Boechera stricta Bostr.26675s0113 I 0.690
evm.TU.supercontig_27.18 Carica papaya evm.TU.supercontig_27.18 I 0.690
cassava4486.m1 Manihot esculenta cassava4486.m1 I 0.690
PK17878.1 Cannabis sativa PK17878.1 D 0.690
SapurV1A.0126s0320 Salix purpurea SapurV1A.0126s0320 I 0.690
SapurV1A.0126s0330 Salix purpurea SapurV1A.0126s0330 I 0.690
chr6.CM0114.130.nc Lotus japonicus chr6.CM0114.130.nc I 0.690
ERF12 Vitis vinifera VIT_10s0003g00130 I 0.690
MTR_2g014300 Medicago truncatula MTR_2g014300 I 0.690
GLYMA15G08360 Glycine max GLYMA15G08360 I 0.690
Solyc02g077840.1 Solanum lycopersicum Solyc02g077840.1 I 0.690
PRUPE_ppa012385mg Prunus persica PRUPE_ppa012385mg I 0.690
POPTR_0011s05570 Populus trichocarpa POPTR_0011s05570 I 0.690
PGSC0003DMG400029713 Solanum tuberosum PGSC0003DMG400029713 I 0.690
POPTR_0004s04700 Populus trichocarpa POPTR_0004s04700 I 0.690
TCM_029823 Theobroma cacao TCM_029823 I 0.690
GLYMA13G31010 Glycine max GLYMA13G31010 I 0.690
30190.m011323 Ricinus communis 30190.m011323 I 0.690
Ca_00326 Cicer arietinum Ca_00326 I 0.690
29640.m000403 Ricinus communis 29640.m000403 I 0.690
Pm010083 Prunus mume Pm010083 I 0.690
cassava42971.valid.m1 Manihot esculenta cassava42971.valid.m1 I 0.690
ERF3 Arabidopsis lyrata fgenesh2_kg.1__4150__AT1G50640.1 I 0.690
Cla020002 Citrullus lanatus Cla020002 I 0.690
BGIOSGA017088 Oryza indica BGIOSGA017088 I 0.689
ORGLA04G0219400 Oryza glaberrima ORGLA04G0219400 I 0.689
ONIVA04G24000 Oryza nivara ONIVA04G24000 I 0.689
OGLUM04G24780 Oryza glumaepatula OGLUM04G24780 I 0.689
ORUFI04G26530 Oryza rufipogon ORUFI04G26530 I 0.689
LPERR04G20430 Leersia perrieri LPERR04G20430 I 0.689
OBART04G25320 Oryza barthii OBART04G25320 I 0.689
OMERI04G20480 Oryza meridionalis OMERI04G20480 I 0.689
OS04G0610400 Oryza sativa OS04G0610400 I 0.689
SELMODRAFT_49950 Selaginella moellendorffii SELMODRAFT_49950 I 0.689
SELMODRAFT_73142 Selaginella moellendorffii SELMODRAFT_73142 I 0.689
Cucsa.190200 Cucumis sativus Cucsa.190200 I 0.689
gene29735-v1.0-hybrid Fragaria vesca gene29735-v1.0-hybrid I 0.689
Cla003319 Citrullus lanatus Cla003319 I 0.689
GSMUA_Achr6G00240_001 Musa acuminata GSMUA_Achr6G00240_001 I 0.688
PGSC0003DMG400014417 Solanum tuberosum PGSC0003DMG400014417 I 0.688
GLYMA07G23225 Glycine max GLYMA07G23225 I 0.686
ERF11 Arabidopsis lyrata fgenesh2_kg.1__3005__AT1G28370.1 I 0.686
cassava43266.valid.m1 Manihot esculenta cassava43266.valid.m1 I 0.685
Bo6g022410 Brassica oleracea Bo6g022410 I 0.685
Aquca_036_00073 Aquilegia coerulea Aquca_036_00073 I 0.685
Sb03g037085 Sorghum bicolor Sb03g037085 I 0.684
OPUNC04G22340 Oryza punctata OPUNC04G22340 I 0.683
MDP0000457509 Malus domestica MDP0000457509 I 0.683
GLYMA02G43500 Glycine max GLYMA02G43500 I 0.682
Pavir.Eb03165 Panicum virgatum Pavir.Eb03165 I 0.682
GLYMA14G05470 Glycine max GLYMA14G05470 I 0.682
SELMODRAFT_443461 Selaginella moellendorffii SELMODRAFT_443461 I 0.682
SELMODRAFT_430375 Selaginella moellendorffii SELMODRAFT_430375 I 0.682
GRMZM2G089995 Zea mays GRMZM2G089995 I 0.679
Si014469m.g Setaria italica Si014469m.g I 0.679
Lus10029987.g Linum usitatissimum Lus10029987.g I 0.677
Lus10035329.g Linum usitatissimum Lus10035329.g I 0.677
PRUPE_ppa010893mg Prunus persica PRUPE_ppa010893mg I 0.677
Bra030095 Brassica rapa Bra030095 I 0.677
Bo7g048170 Brassica oleracea Bo7g048170 I 0.677