CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb08g003550
(
Sorghum bicolor
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
Sb08g003550
T021126_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb08g003550.1
B3
39
149
FEKPLTPSDVGKLNRLVIPKQHAERYFPLGGNGAGDGSDKGLLLAFEDEAGKPWRFRYSYWTSSQSYVLTKGWSRYVKEKRLDAGDVVRFERVRGGLGTGDRLFICCRRRG
Links
Other
B3
family TFs
Other
Sorghum bicolor
TFs
115 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30076.m004471
Ricinus communis
30076.m004471
I
Aquca_037_00291
Aquilegia coerulea
Aquca_037_00291
I
BGIOSGA014498
Oryza indica
BGIOSGA014498
I
BGIOSGA031489
Oryza indica
BGIOSGA031489
N
Bo00853s090
Brassica oleracea
Bo00853s090
I
Bo3g001110
Brassica oleracea
Bo3g001110
N
Bo4g099000
Brassica oleracea
Bo4g099000
N
Bo4g197410
Brassica oleracea
Bo4g197410
I
Bo8g097490
Brassica oleracea
Bo8g097490
N
Bo9g004050
Brassica oleracea
Bo9g004050
N
Bostr.13158s0202
Boechera stricta
Bostr.13158s0202
N
Bostr.5325s0023
Boechera stricta
Bostr.5325s0023
N
Bostr.7365s0004
Boechera stricta
Bostr.7365s0004
I
Bra000434
Brassica rapa
Bra000434
N
Bra007646
Brassica rapa
Bra007646
N
Bra008552
Brassica rapa
Bra008552
I
Bra033294
Brassica rapa
Bra033294
N
Bra037417
Brassica rapa
Bra037417
N
Bra040478
Brassica rapa
Bra040478
I
BRADI5G19260
Brachypodium distachyon
BRADI5G19260
I
Cagra.1968s0048
Capsella grandiflora
Cagra.1968s0048
N
Cagra.23502s0003
Capsella grandiflora
Cagra.23502s0003
I
Carubv10001406m.g
Capsella rubella
Carubv10001406m.g
I
Carubv10009540m.g
Capsella rubella
Carubv10009540m.g
N
Ca_01368
Cicer arietinum
Ca_01368
I
Ciclev10020450m.g
Citrus clementina
Ciclev10020450m.g
I
Eucgr.L00348
Eucalyptus grandis
Eucgr.L00348
I
evm.TU.supercontig_57.71
Carica papaya
evm.TU.supercontig_57.71
I
GLYMA07G05381
Glycine max
GLYMA07G05381
I
GLYMA19G45090
Glycine max
GLYMA19G45090
I
Gorai.001G150200
Gossypium raimondii
Gorai.001G150200
I
Gorai.003G073600
Gossypium raimondii
Gorai.003G073600
I
Gorai.007G114200
Gossypium raimondii
Gorai.007G114200
I
Gorai.008G132400
Gossypium raimondii
Gorai.008G132400
I
Gorai.008G261100
Gossypium raimondii
Gorai.008G261100
I
GRMZM2G082227
Zea mays
GRMZM2G082227
N
0.713
GRMZM2G098443
Zea mays
GRMZM2G098443
N
GRMZM2G125095
Zea mays
GRMZM2G125095
N
0.703
GSMUA_Achr1G03600_001
Musa acuminata
GSMUA_Achr1G03600_001
I
LPERR03G01560
Leersia perrieri
LPERR03G01560
N
LPERR04G18630
Leersia perrieri
LPERR04G18630
N
LPERR10G12990
Leersia perrieri
LPERR10G12990
N
MDP0000288808
Malus domestica
MDP0000288808
N
0.743
MLOC_66387
Hordeum vulgare
MLOC_66387
I
MTR_7g117455
Medicago truncatula
MTR_7g117455
I
MTR_8g023990
Medicago truncatula
MTR_8g023990
I
NGA2
Arabidopsis lyrata
fgenesh2_kg.5__2696__AT3G61970.1
N
NGA3
Arabidopsis thaliana
AT1G01030
N
NGA3
Arabidopsis lyrata
fgenesh2_kg.1__134__AT1G01030.1
N
NGA4
Arabidopsis thaliana
AT4G01500
D
OB03G11610
Oryza brachyantha
OB03G11610
N
OBART04G22880
Oryza barthii
OBART04G22880
I
OBART10G17010
Oryza barthii
OBART10G17010
N
OGLUM04G22780
Oryza glumaepatula
OGLUM04G22780
I
OGLUM10G17040
Oryza glumaepatula
OGLUM10G17040
N
OMERI02G27240
Oryza meridionalis
OMERI02G27240
N
ONIVA04G22030
Oryza nivara
ONIVA04G22030
I
ONIVA10G18740
Oryza nivara
ONIVA10G18740
N
OPUNC02G25780
Oryza punctata
OPUNC02G25780
N
OPUNC04G20430
Oryza punctata
OPUNC04G20430
I
0.757
OPUNC10G16940
Oryza punctata
OPUNC10G16940
N
orange1.1g015743m.g
Citrus sinensis
orange1.1g015743m.g
I
ORGLA04G0198400
Oryza glaberrima
ORGLA04G0198400
I
ORGLA10G0119700
Oryza glaberrima
ORGLA10G0119700
N
ORUFI04G24570
Oryza rufipogon
ORUFI04G24570
I
ORUFI10G18030
Oryza rufipogon
ORUFI10G18030
N
OS04G0581400
Oryza sativa
OS04G0581400
I
OS10G0537100
Oryza sativa
OS10G0537100
N
Pavir.Ia04549
Panicum virgatum
Pavir.Ia04549
N
Pavir.Ib00059
Panicum virgatum
Pavir.Ib00059
N
Pavir.J27608
Panicum virgatum
Pavir.J27608
N
0.705
PGSC0003DMG400012222
Solanum tuberosum
PGSC0003DMG400012222
I
PK21157.1
Cannabis sativa
PK21157.1
I
Pm024248
Prunus mume
Pm024248
I
POPTR_0011s15270
Populus trichocarpa
POPTR_0011s15270
I
PRUPE_ppa019131mg
Prunus persica
PRUPE_ppa019131mg
I
SapurV1A.0003s0340
Salix purpurea
SapurV1A.0003s0340
I
0.703
SapurV1A.0666s0090
Salix purpurea
SapurV1A.0666s0090
I
0.729
Si036864m.g
Setaria italica
Si036864m.g
N
Solyc08g013690.1
Solanum lycopersicum
Solyc08g013690.1
I
TCM_005014
Theobroma cacao
TCM_005014
I
TCM_015590
Theobroma cacao
TCM_015590
I
Thhalv10006123m.g
Eutrema salsugineum
Thhalv10006123m.g
I
Thhalv10008068m.g
Eutrema salsugineum
Thhalv10008068m.g
N
Thhalv10028783m.g
Eutrema salsugineum
Thhalv10028783m.g
I
Traes_2AL_41E2E66D9
Triticum aestivum
Traes_2AL_41E2E66D9
I
0.730
Traes_2DL_896E50180
Triticum aestivum
Traes_2DL_896E50180
I
0.786
Traes_4DL_A83084AC1
Triticum aestivum
Traes_4DL_A83084AC1
N
0.713
Traes_6AL_44AA5642C
Triticum aestivum
Traes_6AL_44AA5642C
I
Traes_6DL_359607E93
Triticum aestivum
Traes_6DL_359607E93
I
VIT_15s0048g02370
Vitis vinifera
VIT_15s0048g02370
I