Carubv10011592m.g (Capsella rubella)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Carubv10011592m.g T022857_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G51120
M01696_2.00 		Arabidopsis thaliana
NNNNYRNNNN
NNNNYRNNNN		 PBM
Weirauch et al.(2014)
pTH8659 		0.832 0.832
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10011592m B3 181 287

Links

Other B3 family TFs
Other Capsella rubella TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA032378 Oryza indica BGIOSGA032378 N
BGIOSGA032380 Oryza indica BGIOSGA032380 N
BRADI3G21380 Brachypodium distachyon BRADI3G21380 N
BRADI3G21390 Brachypodium distachyon BRADI3G21390 N
LPERR10G00500 Leersia perrieri LPERR10G00500 N
LPERR10G00510 Leersia perrieri LPERR10G00510 N
OB10G10530 Oryza brachyantha OB10G10530 N
OB10G10650 Oryza brachyantha OB10G10650 N
OBART10G00640 Oryza barthii OBART10G00640 N
OGLUM10G00620 Oryza glumaepatula OGLUM10G00620 N
OGLUM10G00630 Oryza glumaepatula OGLUM10G00630 N
OGLUM10G00640 Oryza glumaepatula OGLUM10G00640 N
OLONG_022525 Oryza longistaminata OLONG_022525 N
OMERI10G00680 Oryza meridionalis OMERI10G00680 I
OMERI10G00690 Oryza meridionalis OMERI10G00690 N
ONIVA10G01080 Oryza nivara ONIVA10G01080 N
ONIVA10G01090 Oryza nivara ONIVA10G01090 N
OPUNC03G13410 Oryza punctata OPUNC03G13410 N
OPUNC10G00600 Oryza punctata OPUNC10G00600 N
ORUFI10G00640 Oryza rufipogon ORUFI10G00640 N
ORUFI10G00650 Oryza rufipogon ORUFI10G00650 N
OS10G0114500 Oryza sativa OS10G0114500 N
OS10G0115200 Oryza sativa OS10G0115200 N
OS10G0115500 Oryza sativa OS10G0115500 N
Si036337m.g Setaria italica Si036337m.g N