ENSLOCG00000011887 (Lepisosteus oculatus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSLOCG00000011887 T035035_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Srebf2
M01725_2.00 		Mus musculus
TSRCGTGA
TCACGYSA		 PBM
Weirauch et al.(2014)
pTH4327 		0.914 0.980
SREBF2
M02811_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Jolma et al.(2013)
SREBF2_1 		0.914 0.980
SREBF2
M03591_2.00 		Homo sapiens
NRTCACVCCAYH
DRTGGBGTGAYN		 SELEX
Nitta et al.(2015)
SREBF2_1 		0.914 0.980
SREBF2
M04219_2.00 		Homo sapiens
RTCACGCCAY
RTGGCGTGAY		 SELEX
Yin et al.(2017)
SREBF2_eDBD_HT-SELEX_1 		0.914 0.980
SREBF2
M04220_2.00 		Homo sapiens
ATCACGTGAY
RTCACGTGAT		 SELEX
Yin et al.(2017)
SREBF2_eDBD_HT-SELEX_2 		0.914 0.980
SREBF2
M08059_2.00 		Homo sapiens
RTCACVCCAB
VTGGBGTGAY		 ChIP-seq
Mathelier et al.(2014)
MA0596.1 		0.914 0.980
SREBF2
M08741_2.00 		Homo sapiens
NNYCWSBCCABBB
VVVTGGVSWGRNN		 Misc
Kulakovskiy et al.(2013)
SRBP2_HUMAN.H11MO.0.B 		0.914 0.980
Srebf2
M08752_2.00 		Mus musculus
NNYCWSBCCABBB
VVVTGGVSWGRNN		 Misc
Kulakovskiy et al.(2013)
SRBP2_MOUSE.H11MO.0.B 		0.914 0.980
SREBF2
M09462_2.00 		Homo sapiens
MNRTCACVCCAC
GTGGBGTGAYNK		 Misc
Heinz et al.(2010)
HepG2-Srebp2_GSE31477 		0.914 0.980
SREBF2
M09882_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SREBP2_Q6_01 		0.914 0.980
SREBF2
M09883_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SREBP2_Q6 		0.914 0.980
SREBF2
M04221_2.00 		Homo sapiens
RTCACVCCAY
RTGGBGTGAY		 SELEX
Yin et al.(2017)
SREBF2_eDBD_Methyl-HT-SELEX_1 		0.914 0.980
SREBF2
M04222_2.00 		Homo sapiens
RTCACSTGAY
RTCASGTGAY		 SELEX
Yin et al.(2017)
SREBF2_eDBD_Methyl-HT-SELEX_2 		0.914 0.980
SREBF1
M04062_2.00 		Homo sapiens
VHCACVCSAY
RTSGBGTGDB		 SELEX
Yin et al.(2017)
SREBF1_eDBD_HT-SELEX_1 		0.862 0.784
SREBF1
M04063_2.00 		Homo sapiens
VHCRCGYGDB
VHCRCGYGDB		 SELEX
Yin et al.(2017)
SREBF1_eDBD_HT-SELEX_2 		0.862 0.784
SREBF1
M08048_2.00 		Homo sapiens
VTCACSCCAY
RTGGSGTGAB		 ChIP-seq
Mathelier et al.(2014)
MA0595.1 		0.862 0.784
SREBF1
M08711_2.00 		Homo sapiens
VTCACVYSAYH
DRTSRBGTGAB		 Misc
Kulakovskiy et al.(2013)
SRBP1_HUMAN.H11MO.0.A 		0.862 0.784
SREBF1
M09796_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SREBF1_02 		0.862 0.784
SREBF1
M09797_2.00 		Homo sapiens
NATCACGTGAB
VTCACGTGATN		 Transfac
Matys et al.(2006)
V$SREBP1_01 		0.862 0.784
SREBF1
M09798_2.00 		Homo sapiens
KRTCACCCCAC
GTGGGGTGAYM		 Transfac
Matys et al.(2006)
V$SREBP1_02 		0.862 0.784
SREBF1
M09799_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SREBP1_Q5 		0.862 0.784
SREBF1
M09800_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SREBP1_Q6_01 		0.862 0.784
SREBF1
M09801_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SREBP1_Q6 		0.862 0.784
SREBF1
M04064_2.00 		Homo sapiens
MTCACVCCAY
RTGGBGTGAK		 SELEX
Yin et al.(2017)
SREBF1_eDBD_Methyl-HT-SELEX_1 		0.862 0.784
SREBF1
M04065_2.00 		Homo sapiens
RTCACCTGAY
RTCAGGTGAY		 SELEX
Yin et al.(2017)
SREBF1_eDBD_Methyl-HT-SELEX_2 		0.862 0.784
Srebf1
M00754_2.00 		Mus musculus
VWCAYVYSAB
VTSRBRTGWB		 PBM
Weirauch et al.(2013)
pTH0914 		0.862 0.765
Srebf1
M01724_2.00 		Mus musculus
RWCAYVYBD
HVRBRTGWY		 PBM
Weirauch et al.(2014)
pTH5161 		0.862 0.765
Srebf1
M02816_2.00 		Mus musculus
RTCACGTGAY
RTCACGTGAY		 SELEX
Jolma et al.(2013)
Srebf1_1 		0.862 0.765
Srebf1
M08749_2.00 		Mus musculus
VTCASSYSABN
NVTSRSSTGAB		 Misc
Kulakovskiy et al.(2013)
SRBP1_MOUSE.H11MO.0.B 		0.862 0.765
HLH106
M03626_2.00 		Drosophila melanogaster
RTCACGTGAY
RTCACGTGAY		 SELEX
Nitta et al.(2015)
HLH106_1 		0.838 0.647
HLH106
M03627_2.00 		Drosophila melanogaster
NRTCACGCCAYH
DRTGGCGTGAYN		 SELEX
Nitta et al.(2015)
HLH106_2 		0.838 0.647
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000014623 bHLH 390 440

Links

Other bHLH family TFs
Other Lepisosteus oculatus TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30217.m000254 Ricinus communis 30217.m000254 N
AMTR_s00013p00252260 Amborella trichopoda AMTR_s00013p00252260 N
AT4G13040 Arabidopsis thaliana AT4G13040 N
BGIOSGA008254 Oryza indica BGIOSGA008254 N
Bo11579s010 Brassica oleracea Bo11579s010 N
Bo8g033910 Brassica oleracea Bo8g033910 N
Bostr.2021s0045 Boechera stricta Bostr.2021s0045 N
Bra034895 Brassica rapa Bra034895 N
BRADI3G43822 Brachypodium distachyon BRADI3G43822 N
Cagra.2997s0002 Capsella grandiflora Cagra.2997s0002 N
Carubv10005663m.g Capsella rubella Carubv10005663m.g N
cassava38073.valid.m1 Manihot esculenta cassava38073.valid.m1 N
cassava6828.valid.m1 Manihot esculenta cassava6828.valid.m1 N
Ca_11707 Cicer arietinum Ca_11707 N
Ca_17230 Cicer arietinum Ca_17230 N
chr1.LjT46N10.100.nd Lotus japonicus chr1.LjT46N10.100.nd N
chr3.CM0423.200.nd Lotus japonicus chr3.CM0423.200.nd N
Ciclev10021891m.g Citrus clementina Ciclev10021891m.g N
Cla002744 Citrullus lanatus Cla002744 N
Cla015151 Citrullus lanatus Cla015151 N
Cucsa.078000 Cucumis sativus Cucsa.078000 N
Cucsa.150110 Cucumis sativus Cucsa.150110 N
estExt_fgenesh1_pg.C_930051 Physcomitrella patens estExt_fgenesh1_pg.C_930051 N
Eucgr.K02136 Eucalyptus grandis Eucgr.K02136 N
evm.TU.supercontig_21.106 Carica papaya evm.TU.supercontig_21.106 N
e_gw1.317.27.1 Physcomitrella patens e_gw1.317.27.1 N
F775_30629 Aegilops tauschii F775_30629 N
GLYMA08G46250 Glycine max GLYMA08G46250 N
GLYMA18G33460 Glycine max GLYMA18G33460 N
Gorai.001G105100 Gossypium raimondii Gorai.001G105100 N
Gorai.001G188300 Gossypium raimondii Gorai.001G188300 N
Gorai.001G231300 Gossypium raimondii Gorai.001G231300 N
Gorai.007G156300 Gossypium raimondii Gorai.007G156300 N
GSMUA_Achr6G06510_001 Musa acuminata GSMUA_Achr6G06510_001 N
GSMUA_Achr8G00300_001 Musa acuminata GSMUA_Achr8G00300_001 N
GSMUA_Achr9G01590_001 Musa acuminata GSMUA_Achr9G01590_001 N
LPERR02G13930 Leersia perrieri LPERR02G13930 N
Lus10011836.g Linum usitatissimum Lus10011836.g N
Lus10022769.g Linum usitatissimum Lus10022769.g N
MDP0000129941 Malus domestica MDP0000129941 N
MDP0000300382 Malus domestica MDP0000300382 N
MDP0000675982 Malus domestica MDP0000675982 N
mgf003491m Mimulus guttatus mgf003491m N
mgf003727m Mimulus guttatus mgf003727m N
mgf007349m Mimulus guttatus mgf007349m N
MTR_7g055857 Medicago truncatula MTR_7g055857 N
MTR_8g012655 Medicago truncatula MTR_8g012655 N
OBART02G17450 Oryza barthii OBART02G17450 N
OGLUM02G17700 Oryza glumaepatula OGLUM02G17700 N
OLONG_009588 Oryza longistaminata OLONG_009588 N
ONIVA02G18870 Oryza nivara ONIVA02G18870 N
OPUNC02G15530 Oryza punctata OPUNC02G15530 N
orange1.1g025914m.g Citrus sinensis orange1.1g025914m.g N
ORGLA02G0152600 Oryza glaberrima ORGLA02G0152600 N
ORUFI02G18290 Oryza rufipogon ORUFI02G18290 N
OS02G0499000 Oryza sativa OS02G0499000 N
Pavir.Aa01947 Panicum virgatum Pavir.Aa01947 N
Pavir.J28064 Panicum virgatum Pavir.J28064 N
PDK_20s1512801g001 Phoenix dactylifera PDK_20s1512801g001 N
PGSC0003DMG400017485 Solanum tuberosum PGSC0003DMG400017485 N
PK01824.1 Cannabis sativa PK01824.1 N
Pm020315 Prunus mume Pm020315 N
POPTR_0002s24750 Populus trichocarpa POPTR_0002s24750 N
PRUPE_ppa011812mg Prunus persica PRUPE_ppa011812mg N
Sb04g020150 Sorghum bicolor Sb04g020150 N
SELMODRAFT_420254 Selaginella moellendorffii SELMODRAFT_420254 N
SELMODRAFT_443366 Selaginella moellendorffii SELMODRAFT_443366 N
Si018306m.g Setaria italica Si018306m.g N
Solyc09g059510.2 Solanum lycopersicum Solyc09g059510.2 N
TCM_002835 Theobroma cacao TCM_002835 N
Thhalv10026242m.g Eutrema salsugineum Thhalv10026242m.g N
Traes_6AL_13895C140 Triticum aestivum Traes_6AL_13895C140 N
Traes_6DS_43372C0A6 Triticum aestivum Traes_6DS_43372C0A6 N
TRIUR3_27883 Triticum urartu TRIUR3_27883 N
VIT_00s0184g00010 Vitis vinifera VIT_00s0184g00010 N