CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GLYMA10G01010
(
Glycine max
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
GLYMA10G01010
T039623_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BHLH104
M01706_2.00
Arabidopsis thaliana
GGCACGTGCC
GGCACGTGCC
PBM
Weirauch et al.(2014)
pTH7365
0.842
0.784
BHLH104
M06737_2.00
Arabidopsis thaliana
GVCACGTGBMDDBHNSDNBH
DVNHSNDVHHKVCACGTGBC
Dap-seq
OMalley et al.(2016)
bHLH104_col_b
0.842
0.784
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA10G01010.1
bHLH
63
113
VGSKACREKLRRERLNERFCDLSSVLEPGRPVRTDKPAILDDAIRVLSQLK
GLYMA10G01010.2
bHLH
35
85
VGSKACREKLRRERLNERFCDLSSVLEPGRPVRTDKPAILDDAIRVLSQLK
Links
Other
bHLH
family TFs
Other
Glycine max
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29767.m000200
Ricinus communis
29767.m000200
N
0.000
Aquca_009_00954
Aquilegia coerulea
Aquca_009_00954
N
0.000
cassava2361.valid.m1
Manihot esculenta
cassava2361.valid.m1
N
0.000
cassava31335.valid.m1
Manihot esculenta
cassava31335.valid.m1
N
0.000
Ca_21138
Cicer arietinum
Ca_21138
N
0.000
Ciclev10011141m.g
Citrus clementina
Ciclev10011141m.g
N
0.000
Ciclev10030787m.g
Citrus clementina
Ciclev10030787m.g
N
0.000
Cla018179
Citrullus lanatus
Cla018179
N
0.000
Cucsa.175500
Cucumis sativus
Cucsa.175500
N
0.000
Eucgr.A01279
Eucalyptus grandis
Eucgr.A01279
N
0.000
gene18433-v1.0-hybrid
Fragaria vesca
gene18433-v1.0-hybrid
N
0.000
GLYMA03G10320
Glycine max
GLYMA03G10320
N
0.000
GLYMA07G15950
Glycine max
GLYMA07G15950
N
0.000
GLYMA18G39920
Glycine max
GLYMA18G39920
N
0.000
Gorai.007G376400
Gossypium raimondii
Gorai.007G376400
N
0.000
Gorai.011G266200
Gossypium raimondii
Gorai.011G266200
N
0.000
GRMZM2G049159
Zea mays
GRMZM2G049159
N
0.000
GRMZM2G098784
Zea mays
GRMZM2G098784
N
0.000
Lus10024384.g
Linum usitatissimum
Lus10024384.g
N
0.000
mgf011165m
Mimulus guttatus
mgf011165m
N
0.000
MTR_7g062120
Medicago truncatula
MTR_7g062120
N
0.000
orange1.1g004488m.g
Citrus sinensis
orange1.1g004488m.g
N
0.000
orange1.1g004514m.g
Citrus sinensis
orange1.1g004514m.g
N
0.000
PGSC0003DMG400008904
Solanum tuberosum
PGSC0003DMG400008904
N
0.000
PGSC0003DMG400019200
Solanum tuberosum
PGSC0003DMG400019200
N
0.000
PK20526.1
Cannabis sativa
PK20526.1
N
0.000
Pm002685
Prunus mume
Pm002685
N
0.000
POPTR_0006s08690
Populus trichocarpa
POPTR_0006s08690
N
0.000
PRUPE_ppa001883mg
Prunus persica
PRUPE_ppa001883mg
N
0.000
SapurV1A.0001s1700
Salix purpurea
SapurV1A.0001s1700
N
0.000
Sb01g039670
Sorghum bicolor
Sb01g039670
N
0.000
Si034417m.g
Setaria italica
Si034417m.g
N
0.000
Solyc09g010920.1
Solanum lycopersicum
Solyc09g010920.1
N
0.000
Solyc10g086530.1
Solanum lycopersicum
Solyc10g086530.1
N
0.000
TCM_021920
Theobroma cacao
TCM_021920
N
0.000
TCM_042705
Theobroma cacao
TCM_042705
N
0.000
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.000
VIT_08s0007g00510
Vitis vinifera
VIT_08s0007g00510
N
0.000