LPERR02G18900 (Leersia perrieri)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 LPERR02G18900 T040959_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS08G0506700
M01755_2.00 		Oryza sativa
NCCACTTGN
NCAAGTGGN		 PBM
Weirauch et al.(2014)
pTH8547 		0.887 0.863
BHLH122
M06724_2.00 		Arabidopsis thaliana
NNDNCMACTTGNNH
DNNCAAGTKGNHNN		 Dap-seq
OMalley et al.(2016)
bHLH122_col100_a 		0.851 0.804
BHLH122
M06725_2.00 		Arabidopsis thaliana
DNCMACTTGYN
NRCAAGTKGNH		 Dap-seq
OMalley et al.(2016)
bHLH122_colamp_a 		0.851 0.804
BHLH80
M06722_2.00 		Arabidopsis thaliana
DNCMACTTGCH
DGCAAGTKGNH		 Dap-seq
OMalley et al.(2016)
bHLH80_col_a 		0.845 0.784
BHLH80
M06723_2.00 		Arabidopsis thaliana
DKCMACTTGCA
TGCAAGTKGMH		 Dap-seq
OMalley et al.(2016)
bHLH80_colamp_a 		0.845 0.784
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR02G18900.1 bHLH 223 273

Links

Other bHLH family TFs
Other Leersia perrieri TFs

231 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29216.m000261 Ricinus communis 29216.m000261 I 0.887
30152.m002405 Ricinus communis 30152.m002405 I 0.884
Aquca_009_00280 Aquilegia coerulea Aquca_009_00280 I 0.887
BGIOSGA008576 Oryza indica BGIOSGA008576 I 0.914
BGIOSGA028963 Oryza indica BGIOSGA028963 I 0.887
BGIOSGA031008 Oryza indica BGIOSGA031008 I 0.887
BHLH122 Arabidopsis thaliana AT1G51140 D 0.851
Bo4g015860 Brassica oleracea Bo4g015860 I
Bo4g191390 Brassica oleracea Bo4g191390 I 0.851
Bo6g024810 Brassica oleracea Bo6g024810 I 0.851
Bostr.26675s0074 Boechera stricta Bostr.26675s0074 I 0.851
Bra004678 Brassica rapa Bra004678 I
Bra016886 Brassica rapa Bra016886 I 0.851
Bra018896 Brassica rapa Bra018896 I 0.851
BRADI3G39927 Brachypodium distachyon BRADI3G39927 I 0.887
BRADI4G33670 Brachypodium distachyon BRADI4G33670 I
Cagra.2093s0006 Capsella grandiflora Cagra.2093s0006 I 0.851
Carubv10009458m.g Capsella rubella Carubv10009458m.g I 0.851
cassava2126.valid.m1 Manihot esculenta cassava2126.valid.m1 I 0.887
cassava29651.valid.m1 Manihot esculenta cassava29651.valid.m1 I 0.884
cassava30692.valid.m1 Manihot esculenta cassava30692.valid.m1 I 0.887
cassava35967.valid.m1 Manihot esculenta cassava35967.valid.m1 I 0.887
cassava44054.valid.m1 Manihot esculenta cassava44054.valid.m1 I 0.887
Ca_02662 Cicer arietinum Ca_02662 I 0.851
Ca_14223 Cicer arietinum Ca_14223 I 0.851
Ca_18899 Cicer arietinum Ca_18899 I
Ca_26916 Cicer arietinum Ca_26916 I 0.854
Ciclev10005233m.g Citrus clementina Ciclev10005233m.g I 0.887
Ciclev10015437m.g Citrus clementina Ciclev10015437m.g I 0.851
Ciclev10031622m.g Citrus clementina Ciclev10031622m.g I 0.858
Cla006394 Citrullus lanatus Cla006394 I
Cla017792 Citrullus lanatus Cla017792 I 0.887
Cucsa.143260 Cucumis sativus Cucsa.143260 I
Cucsa.242910 Cucumis sativus Cucsa.242910 I 0.887
Eucgr.A02417 Eucalyptus grandis Eucgr.A02417 I 0.887
Eucgr.B03669 Eucalyptus grandis Eucgr.B03669 I 0.851
Eucgr.J00796 Eucalyptus grandis Eucgr.J00796 I 0.851
evm.TU.supercontig_84.89 Carica papaya evm.TU.supercontig_84.89 I 0.887
evm.TU.supercontig_85.115 Carica papaya evm.TU.supercontig_85.115 I 0.899
F775_24151 Aegilops tauschii F775_24151 I 0.887
fgenesh1_pg.scaffold_155000050 Physcomitrella patens fgenesh1_pg.scaffold_155000050 I
fgenesh2_kg.1__4183__AT1G51140.1 Arabidopsis lyrata fgenesh2_kg.1__4183__AT1G51140.1 I 0.851
gene00545-v1.0-hybrid Fragaria vesca gene00545-v1.0-hybrid I 0.887
gene20622-v1.0-hybrid Fragaria vesca gene20622-v1.0-hybrid I 0.887
gene26967-v1.0-hybrid Fragaria vesca gene26967-v1.0-hybrid I 0.858
GLYMA10G12150 Glycine max GLYMA10G12150 I 0.887
GLYMA11G13960 Glycine max GLYMA11G13960 I 0.851
GLYMA12G05930 Glycine max GLYMA12G05930 I 0.851
GLYMA13G41670 Glycine max GLYMA13G41670 I 0.851
GLYMA15G03740 Glycine max GLYMA15G03740 I 0.851
Gorai.002G228900 Gossypium raimondii Gorai.002G228900 I 0.887
Gorai.004G035800 Gossypium raimondii Gorai.004G035800 I 0.863
Gorai.006G140200 Gossypium raimondii Gorai.006G140200 I 0.887
Gorai.009G071900 Gossypium raimondii Gorai.009G071900 I 0.851
GRMZM2G085467 Zea mays GRMZM2G085467 I 0.851
GRMZM2G142932 Zea mays GRMZM2G142932 I
GRMZM2G153454 Zea mays GRMZM2G153454 I
GRMZM2G417597 Zea mays GRMZM2G417597 I 0.851
GRMZM2G437481 Zea mays GRMZM2G437481 I 0.914
GSMUA_Achr5G22310_001 Musa acuminata GSMUA_Achr5G22310_001 I 0.887
GSMUA_Achr6G21220_001 Musa acuminata GSMUA_Achr6G21220_001 I 0.903
GSMUA_Achr7G20490_001 Musa acuminata GSMUA_Achr7G20490_001 I 0.875
GSMUA_Achr9G27780_001 Musa acuminata GSMUA_Achr9G27780_001 I 0.851
Lus10021023.g Linum usitatissimum Lus10021023.g I 0.887
Lus10031255.g Linum usitatissimum Lus10031255.g I 0.887
Lus10031826.g Linum usitatissimum Lus10031826.g I 0.887
MDP0000180376 Malus domestica MDP0000180376 I 0.887
mgf016092m Mimulus guttatus mgf016092m I
mgf016734m Mimulus guttatus mgf016734m I 0.887
MLOC_30102 Hordeum vulgare MLOC_30102 I
MLOC_67834 Hordeum vulgare MLOC_67834 I 0.887
MTR_1g052470 Medicago truncatula MTR_1g052470 I
MTR_2g098310 Medicago truncatula MTR_2g098310 I 0.851
MTR_4g065870 Medicago truncatula MTR_4g065870 I
OB02G30670 Oryza brachyantha OB02G30670 I 0.914
OB08G26810 Oryza brachyantha OB08G26810 I 0.887
OBART02G23210 Oryza barthii OBART02G23210 I 0.914
OBART08G19860 Oryza barthii OBART08G19860 I 0.887
OBART09G14660 Oryza barthii OBART09G14660 I 0.887
OGLUM08G21000 Oryza glumaepatula OGLUM08G21000 I 0.887
OGLUM09G15300 Oryza glumaepatula OGLUM09G15300 I 0.887
OLONG_009256 Oryza longistaminata OLONG_009256 I 0.914
OLONG_017566 Oryza longistaminata OLONG_017566 I 0.887
OMERI02G22740 Oryza meridionalis OMERI02G22740 I 0.914
OMERI08G16700 Oryza meridionalis OMERI08G16700 I 0.887
OMERI09G11370 Oryza meridionalis OMERI09G11370 I 0.887
ONIVA02G26110 Oryza nivara ONIVA02G26110 I 0.914
ONIVA08G17500 Oryza nivara ONIVA08G17500 I 0.887
ONIVA08G22410 Oryza nivara ONIVA08G22410 I 0.887
OPUNC02G21170 Oryza punctata OPUNC02G21170 I 0.914
OPUNC08G18020 Oryza punctata OPUNC08G18020 I 0.887
OPUNC09G13060 Oryza punctata OPUNC09G13060 I 0.887
orange1.1g015337m.g Citrus sinensis orange1.1g015337m.g I 0.851
orange1.1g016638m.g Citrus sinensis orange1.1g016638m.g I 0.858
orange1.1g018007m.g Citrus sinensis orange1.1g018007m.g I 0.887
ORGLA02G0200100 Oryza glaberrima ORGLA02G0200100 I 0.914
ORGLA08G0174800 Oryza glaberrima ORGLA08G0174800 I 0.887
ORGLA09G0112900 Oryza glaberrima ORGLA09G0112900 I 0.887
ORUFI02G24640 Oryza rufipogon ORUFI02G24640 I 0.914
ORUFI08G22260 Oryza rufipogon ORUFI08G22260 I 0.887
ORUFI09G15820 Oryza rufipogon ORUFI09G15820 I 0.887
OS08G0506700 Oryza sativa OS08G0506700 D 0.887
OS09G0487900 Oryza sativa OS09G0487900 I 0.887
Pavir.Aa01423 Panicum virgatum Pavir.Aa01423 I 0.903
Pavir.Ab02229 Panicum virgatum Pavir.Ab02229 I 0.914
Pavir.Ba00676 Panicum virgatum Pavir.Ba00676 I
Pavir.Ba01718 Panicum virgatum Pavir.Ba01718 I 0.851
Pavir.Bb03157 Panicum virgatum Pavir.Bb03157 I
Pavir.Fa00493 Panicum virgatum Pavir.Fa00493 I
Pavir.Ga01365 Panicum virgatum Pavir.Ga01365 I 0.914
Pavir.Gb01377 Panicum virgatum Pavir.Gb01377 I 0.914
Pavir.J00377 Panicum virgatum Pavir.J00377 I 0.851
Pavir.J08536 Panicum virgatum Pavir.J08536 I 0.914
Pavir.J14004 Panicum virgatum Pavir.J14004 I 0.851
Pavir.J25484 Panicum virgatum Pavir.J25484 I
PDK_20s1302565g001 Phoenix dactylifera PDK_20s1302565g001 I
PDK_20s1391471g001 Phoenix dactylifera PDK_20s1391471g001 I 0.887
PDK_20s1484071g001 Phoenix dactylifera PDK_20s1484071g001 I 0.902
PDK_20s1630671g001 Phoenix dactylifera PDK_20s1630671g001 I 0.902
PGSC0003DMG400008153 Solanum tuberosum PGSC0003DMG400008153 I 0.887
PGSC0003DMG400025263 Solanum tuberosum PGSC0003DMG400025263 I 0.884
PK18038.1 Cannabis sativa PK18038.1 I 0.887
PK20089.1 Cannabis sativa PK20089.1 I 0.851
Pm000447 Prunus mume Pm000447 I 0.887
Pm025821 Prunus mume Pm025821 I 0.887
POPTR_0006s05640 Populus trichocarpa POPTR_0006s05640 I 0.887
POPTR_0009s06910 Populus trichocarpa POPTR_0009s06910 I 0.884
POPTR_0016s05100 Populus trichocarpa POPTR_0016s05100 I 0.887
PRUPE_ppa006295mg Prunus persica PRUPE_ppa006295mg I 0.887
PRUPE_ppa019977mg Prunus persica PRUPE_ppa019977mg I 0.887
SapurV1A.0018s0320 Salix purpurea SapurV1A.0018s0320 I 0.887
SapurV1A.0111s0030 Salix purpurea SapurV1A.0111s0030 I 0.897
SapurV1A.0133s0050 Salix purpurea SapurV1A.0133s0050 I 0.887
SapurV1A.1898s0040 Salix purpurea SapurV1A.1898s0040 I 0.897
Sb02g028300 Sorghum bicolor Sb02g028300 I 0.851
Sb04g025260 Sorghum bicolor Sb04g025260 I 0.914
Sb06g020810 Sorghum bicolor Sb06g020810 I 0.914
Sb07g027810 Sorghum bicolor Sb07g027810 I
SELMODRAFT_402301 Selaginella moellendorffii SELMODRAFT_402301 I
Si010513m.g Setaria italica Si010513m.g I 0.914
Si013950m.g Setaria italica Si013950m.g I
Si029614m.g Setaria italica Si029614m.g I 0.851
Si030166m.g Setaria italica Si030166m.g I
Solyc01g086870.2 Solanum lycopersicum Solyc01g086870.2 I 0.884
Solyc10g079050.1 Solanum lycopersicum Solyc10g079050.1 I 0.887
TCM_005925 Theobroma cacao TCM_005925 I 0.863
TCM_024842 Theobroma cacao TCM_024842 I 0.887
TCM_040564 Theobroma cacao TCM_040564 I 0.851
Thhalv10011463m.g Eutrema salsugineum Thhalv10011463m.g I 0.851
Traes_5BL_4317E525B Triticum aestivum Traes_5BL_4317E525B I
Traes_7AS_4FAB72487 Triticum aestivum Traes_7AS_4FAB72487 I 0.887
Traes_7DS_B671A4EAD Triticum aestivum Traes_7DS_B671A4EAD I 0.887
TRIUR3_26625 Triticum urartu TRIUR3_26625 I 0.887
VIT_08s0007g07810 Vitis vinifera VIT_08s0007g07810 I 0.887
VIT_13s0064g01290 Vitis vinifera VIT_13s0064g01290 I 0.884