OMERI09G11370 (Oryza meridionalis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 OMERI09G11370 T042554_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS08G0506700
M01755_2.00 		Oryza sativa
NCCACTTGN
NCAAGTGGN		 PBM
Weirauch et al.(2014)
pTH8547 		0.914 0.961
BHLH80
M06722_2.00 		Arabidopsis thaliana
DNCMACTTGCH
DGCAAGTKGNH		 Dap-seq
OMalley et al.(2016)
bHLH80_col_a 		0.873 0.843
BHLH80
M06723_2.00 		Arabidopsis thaliana
DKCMACTTGCA
TGCAAGTKGMH		 Dap-seq
OMalley et al.(2016)
bHLH80_colamp_a 		0.873 0.843
BHLH122
M06724_2.00 		Arabidopsis thaliana
NNDNCMACTTGNNH
DNNCAAGTKGNHNN		 Dap-seq
OMalley et al.(2016)
bHLH122_col100_a 		0.867 0.863
BHLH122
M06725_2.00 		Arabidopsis thaliana
DNCMACTTGYN
NRCAAGTKGNH		 Dap-seq
OMalley et al.(2016)
bHLH122_colamp_a 		0.867 0.863
AT2G42280
M06733_2.00 		Arabidopsis thaliana
DNCMACTTGYH
DRCAAGTKGNH		 Dap-seq
OMalley et al.(2016)
bHLH130_col_a 		0.844 0.922
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI09G11370.6 bHLH 321 371
OMERI09G11370.7 bHLH 321 371

Links

Other bHLH family TFs
Other Oryza meridionalis TFs

234 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA028963 Oryza indica BGIOSGA028963 I 0.914
BGIOSGA031008 Oryza indica BGIOSGA031008 I 0.914
BRADI3G39927 Brachypodium distachyon BRADI3G39927 I 0.914
F775_24151 Aegilops tauschii F775_24151 I 0.914
MLOC_67834 Hordeum vulgare MLOC_67834 I 0.914
OB08G26810 Oryza brachyantha OB08G26810 I 0.914
OBART08G19860 Oryza barthii OBART08G19860 I 0.914
OBART09G14660 Oryza barthii OBART09G14660 I 0.914
OGLUM08G21000 Oryza glumaepatula OGLUM08G21000 I 0.914
OGLUM09G15300 Oryza glumaepatula OGLUM09G15300 I 0.914
OLONG_017566 Oryza longistaminata OLONG_017566 I 0.914
OMERI08G16700 Oryza meridionalis OMERI08G16700 I 0.914
ONIVA08G17500 Oryza nivara ONIVA08G17500 I 0.914
ONIVA08G22410 Oryza nivara ONIVA08G22410 I 0.914
OPUNC08G18020 Oryza punctata OPUNC08G18020 I 0.914
OPUNC09G13060 Oryza punctata OPUNC09G13060 I 0.914
ORGLA08G0174800 Oryza glaberrima ORGLA08G0174800 I 0.914
ORGLA09G0112900 Oryza glaberrima ORGLA09G0112900 I 0.914
ORUFI08G22260 Oryza rufipogon ORUFI08G22260 I 0.914
ORUFI09G15820 Oryza rufipogon ORUFI09G15820 I 0.914
OS08G0506700 Oryza sativa OS08G0506700 D 0.914
OS09G0487900 Oryza sativa OS09G0487900 I 0.914
Traes_7AS_4FAB72487 Triticum aestivum Traes_7AS_4FAB72487 I 0.914
Traes_7DS_B671A4EAD Triticum aestivum Traes_7DS_B671A4EAD I 0.914
TRIUR3_26625 Triticum urartu TRIUR3_26625 I 0.914
GLYMA10G12150 Glycine max GLYMA10G12150 I 0.902
GSMUA_Achr5G22310_001 Musa acuminata GSMUA_Achr5G22310_001 I 0.902
PGSC0003DMG400008153 Solanum tuberosum PGSC0003DMG400008153 I 0.902
POPTR_0006s05640 Populus trichocarpa POPTR_0006s05640 I 0.902
POPTR_0016s05100 Populus trichocarpa POPTR_0016s05100 I 0.902
PRUPE_ppa006295mg Prunus persica PRUPE_ppa006295mg I 0.902
PRUPE_ppa019977mg Prunus persica PRUPE_ppa019977mg I 0.902
Solyc10g079050.1 Solanum lycopersicum Solyc10g079050.1 I 0.902
TCM_024842 Theobroma cacao TCM_024842 I 0.902
VIT_08s0007g07810 Vitis vinifera VIT_08s0007g07810 I 0.902
Cla017792 Citrullus lanatus Cla017792 I 0.902
Pm000447 Prunus mume Pm000447 I 0.902
Pm025821 Prunus mume Pm025821 I 0.902
29216.m000261 Ricinus communis 29216.m000261 I 0.902
cassava2126.valid.m1 Manihot esculenta cassava2126.valid.m1 I 0.902
cassava30692.valid.m1 Manihot esculenta cassava30692.valid.m1 I 0.902
cassava35967.valid.m1 Manihot esculenta cassava35967.valid.m1 I 0.902
cassava44054.valid.m1 Manihot esculenta cassava44054.valid.m1 I 0.902
Cucsa.242910 Cucumis sativus Cucsa.242910 I 0.902
mgf016734m Mimulus guttatus mgf016734m I 0.902
Aquca_009_00280 Aquilegia coerulea Aquca_009_00280 I 0.902
Ciclev10005233m.g Citrus clementina Ciclev10005233m.g I 0.902
Eucgr.A02417 Eucalyptus grandis Eucgr.A02417 I 0.902
evm.TU.supercontig_84.89 Carica papaya evm.TU.supercontig_84.89 I 0.902
gene00545-v1.0-hybrid Fragaria vesca gene00545-v1.0-hybrid I 0.902
gene20622-v1.0-hybrid Fragaria vesca gene20622-v1.0-hybrid I 0.902
Gorai.002G228900 Gossypium raimondii Gorai.002G228900 I 0.902
Gorai.006G140200 Gossypium raimondii Gorai.006G140200 I 0.902
Lus10021023.g Linum usitatissimum Lus10021023.g I 0.902
Lus10031255.g Linum usitatissimum Lus10031255.g I 0.902
Lus10031826.g Linum usitatissimum Lus10031826.g I 0.902
MDP0000180376 Malus domestica MDP0000180376 I 0.902
orange1.1g018007m.g Citrus sinensis orange1.1g018007m.g I 0.902
SapurV1A.0018s0320 Salix purpurea SapurV1A.0018s0320 I 0.902
SapurV1A.0133s0050 Salix purpurea SapurV1A.0133s0050 I 0.902
PK18038.1 Cannabis sativa PK18038.1 I 0.902
PDK_20s1391471g001 Phoenix dactylifera PDK_20s1391471g001 I 0.902
PGSC0003DMG400025263 Solanum tuberosum PGSC0003DMG400025263 I 0.900
POPTR_0009s06910 Populus trichocarpa POPTR_0009s06910 I 0.900
Solyc01g086870.2 Solanum lycopersicum Solyc01g086870.2 I 0.900
VIT_13s0064g01290 Vitis vinifera VIT_13s0064g01290 I 0.900
30152.m002405 Ricinus communis 30152.m002405 I 0.900
cassava29651.valid.m1 Manihot esculenta cassava29651.valid.m1 I 0.900
PDK_20s1484071g001 Phoenix dactylifera PDK_20s1484071g001 I 0.899
PDK_20s1630671g001 Phoenix dactylifera PDK_20s1630671g001 I 0.899
GSMUA_Achr7G20490_001 Musa acuminata GSMUA_Achr7G20490_001 I 0.891
evm.TU.supercontig_85.115 Carica papaya evm.TU.supercontig_85.115 I 0.890
SapurV1A.0111s0030 Salix purpurea SapurV1A.0111s0030 I 0.888
SapurV1A.1898s0040 Salix purpurea SapurV1A.1898s0040 I 0.888
BGIOSGA008576 Oryza indica BGIOSGA008576 I 0.887
GRMZM2G437481 Zea mays GRMZM2G437481 I 0.887
LPERR02G18900 Leersia perrieri LPERR02G18900 I 0.887
OB02G30670 Oryza brachyantha OB02G30670 I 0.887
OBART02G23210 Oryza barthii OBART02G23210 I 0.887
OLONG_009256 Oryza longistaminata OLONG_009256 I 0.887
OMERI02G22740 Oryza meridionalis OMERI02G22740 I 0.887
ONIVA02G26110 Oryza nivara ONIVA02G26110 I 0.887
OPUNC02G21170 Oryza punctata OPUNC02G21170 I 0.887
ORGLA02G0200100 Oryza glaberrima ORGLA02G0200100 I 0.887
ORUFI02G24640 Oryza rufipogon ORUFI02G24640 I 0.887
Sb04g025260 Sorghum bicolor Sb04g025260 I 0.887
Sb06g020810 Sorghum bicolor Sb06g020810 I 0.887
Si010513m.g Setaria italica Si010513m.g I 0.887
Pavir.Ab02229 Panicum virgatum Pavir.Ab02229 I 0.887
Pavir.Ga01365 Panicum virgatum Pavir.Ga01365 I 0.887
Pavir.Gb01377 Panicum virgatum Pavir.Gb01377 I 0.887
Pavir.J08536 Panicum virgatum Pavir.J08536 I 0.887
Ca_26916 Cicer arietinum Ca_26916 I 0.882
GRMZM2G085467 Zea mays GRMZM2G085467 I 0.879
GRMZM2G417597 Zea mays GRMZM2G417597 I 0.879
GSMUA_Achr3G11110_001 Musa acuminata GSMUA_Achr3G11110_001 I 0.879
Sb02g028300 Sorghum bicolor Sb02g028300 I 0.879
Si029614m.g Setaria italica Si029614m.g I 0.879
TCM_005925 Theobroma cacao TCM_005925 I 0.879
Eucgr.J00796 Eucalyptus grandis Eucgr.J00796 I 0.879
Gorai.004G035800 Gossypium raimondii Gorai.004G035800 I 0.879
Pavir.Ba01718 Panicum virgatum Pavir.Ba01718 I 0.879
Pavir.J00377 Panicum virgatum Pavir.J00377 I 0.879
Pavir.J14004 Panicum virgatum Pavir.J14004 I 0.879
GSMUA_Achr6G21220_001 Musa acuminata GSMUA_Achr6G21220_001 I 0.875
Pavir.Aa01423 Panicum virgatum Pavir.Aa01423 I 0.875
Ciclev10031622m.g Citrus clementina Ciclev10031622m.g I 0.874
gene26967-v1.0-hybrid Fragaria vesca gene26967-v1.0-hybrid I 0.874
orange1.1g016638m.g Citrus sinensis orange1.1g016638m.g I 0.874
BHLH80 Arabidopsis thaliana AT1G35460 D 0.873
BHLH81 Arabidopsis thaliana AT4G09180 I 0.873
Bo6g043840 Brassica oleracea Bo6g043840 I 0.873
Bo8g026850 Brassica oleracea Bo8g026850 I 0.873
Bra028088 Brassica rapa Bra028088 I 0.873
Bra036760 Brassica rapa Bra036760 I 0.873
fgenesh2_kg.6__2924__AT4G09180.1 Arabidopsis lyrata fgenesh2_kg.6__2924__AT4G09180.1 I 0.873
GLYMA08G26110 Glycine max GLYMA08G26110 I 0.873
PGSC0003DMG400031314 Solanum tuberosum PGSC0003DMG400031314 I 0.873
PRUPE_ppa011017mg Prunus persica PRUPE_ppa011017mg I 0.873
scaffold_103992.1 Arabidopsis lyrata scaffold_103992.1 I 0.873
Solyc06g065040.2 Solanum lycopersicum Solyc06g065040.2 I 0.873
TCM_036484 Theobroma cacao TCM_036484 I 0.873
VIT_18s0041g00690 Vitis vinifera VIT_18s0041g00690 I 0.873
Pm004181 Prunus mume Pm004181 I 0.873
cassava13743.valid.m1 Manihot esculenta cassava13743.valid.m1 I 0.873
Cucsa.061590 Cucumis sativus Cucsa.061590 I 0.873
mgf002701m Mimulus guttatus mgf002701m I 0.873
Bostr.1774s0027 Boechera stricta Bostr.1774s0027 I 0.873
Bostr.25463s0393 Boechera stricta Bostr.25463s0393 I 0.873
Cagra.18223s0002 Capsella grandiflora Cagra.18223s0002 I 0.873
Cagra.9781s0002 Capsella grandiflora Cagra.9781s0002 I 0.873
Carubv10001721m.g Capsella rubella Carubv10001721m.g I 0.873
Carubv10010050m.g Capsella rubella Carubv10010050m.g I 0.873
Ciclev10002083m.g Citrus clementina Ciclev10002083m.g I 0.873
gene26880-v1.0-hybrid Fragaria vesca gene26880-v1.0-hybrid I 0.873
Gorai.013G138300 Gossypium raimondii Gorai.013G138300 I 0.873
MDP0000269890 Malus domestica MDP0000269890 I 0.873
orange1.1g023215m.g Citrus sinensis orange1.1g023215m.g I 0.873
SapurV1A.0391s0050 Salix purpurea SapurV1A.0391s0050 I 0.873
SapurV1A.0690s0120 Salix purpurea SapurV1A.0690s0120 I 0.873
SapurV1A.1647s0020 Salix purpurea SapurV1A.1647s0020 I 0.873
Thhalv10028883m.g Eutrema salsugineum Thhalv10028883m.g I 0.873
PK06301.1 Cannabis sativa PK06301.1 I 0.873
GLYMA02G29830 Glycine max GLYMA02G29830 I 0.872
30149.m000231 Ricinus communis 30149.m000231 I 0.870
cassava35513.valid.m1 Manihot esculenta cassava35513.valid.m1 I 0.870
SapurV1A.0027s0090 Salix purpurea SapurV1A.0027s0090 I 0.870
GLYMA08G16190 Glycine max GLYMA08G16190 I 0.869
Cucsa.050160 Cucumis sativus Cucsa.050160 I 0.869
gw1.185.89.1 Physcomitrella patens gw1.185.89.1 I 0.868
BHLH122 Arabidopsis thaliana AT1G51140 D 0.867
Bo4g191390 Brassica oleracea Bo4g191390 I 0.867
Bo6g024810 Brassica oleracea Bo6g024810 I 0.867
Bra016886 Brassica rapa Bra016886 I 0.867
Bra018896 Brassica rapa Bra018896 I 0.867
fgenesh2_kg.1__4183__AT1G51140.1 Arabidopsis lyrata fgenesh2_kg.1__4183__AT1G51140.1 I 0.867
GLYMA11G13960 Glycine max GLYMA11G13960 I 0.867
GLYMA12G05930 Glycine max GLYMA12G05930 I 0.867
GLYMA13G41670 Glycine max GLYMA13G41670 I 0.867
GLYMA15G03740 Glycine max GLYMA15G03740 I 0.867
GSMUA_Achr9G27780_001 Musa acuminata GSMUA_Achr9G27780_001 I 0.867
MTR_2g098310 Medicago truncatula MTR_2g098310 I 0.867
TCM_040564 Theobroma cacao TCM_040564 I 0.867
Ca_02662 Cicer arietinum Ca_02662 I 0.867
Ca_14223 Cicer arietinum Ca_14223 I 0.867
Bostr.26675s0074 Boechera stricta Bostr.26675s0074 I 0.867
Cagra.2093s0006 Capsella grandiflora Cagra.2093s0006 I 0.867
Carubv10009458m.g Capsella rubella Carubv10009458m.g I 0.867
Ciclev10015437m.g Citrus clementina Ciclev10015437m.g I 0.867
Eucgr.B03669 Eucalyptus grandis Eucgr.B03669 I 0.867
Gorai.009G071900 Gossypium raimondii Gorai.009G071900 I 0.867
orange1.1g015337m.g Citrus sinensis orange1.1g015337m.g I 0.867
Thhalv10011463m.g Eutrema salsugineum Thhalv10011463m.g I 0.867
PK20089.1 Cannabis sativa PK20089.1 I 0.867
AT2G43140 Arabidopsis thaliana AT2G43140 I 0.866
Bo3g036400 Brassica oleracea Bo3g036400 I 0.866
Bo4g019620 Brassica oleracea Bo4g019620 I 0.866
Bra000291 Brassica rapa Bra000291 I 0.866
Bra004748 Brassica rapa Bra004748 I 0.866
fgenesh2_kg.4__2475__AT2G43140.1 Arabidopsis lyrata fgenesh2_kg.4__2475__AT2G43140.1 I 0.866
GLYMA20G39220 Glycine max GLYMA20G39220 I 0.866
PGSC0003DMG400006569 Solanum tuberosum PGSC0003DMG400006569 I 0.866
PRUPE_ppa025178mg Prunus persica PRUPE_ppa025178mg I 0.866
Solyc09g098110.2 Solanum lycopersicum Solyc09g098110.2 I 0.866
TCM_020066 Theobroma cacao TCM_020066 I 0.866
VIT_05s0124g00240 Vitis vinifera VIT_05s0124g00240 I 0.866
Pm007619 Prunus mume Pm007619 I 0.866
mgf005043m Mimulus guttatus mgf005043m I 0.866
Aquca_058_00134 Aquilegia coerulea Aquca_058_00134 I 0.866
Bostr.25993s0461 Boechera stricta Bostr.25993s0461 I 0.866
Cagra.3706s0004 Capsella grandiflora Cagra.3706s0004 I 0.866
Carubv10023683m.g Capsella rubella Carubv10023683m.g I 0.866
Gorai.011G144600 Gossypium raimondii Gorai.011G144600 I 0.866
MDP0000273574 Malus domestica MDP0000273574 I 0.866
SapurV1A.0529s0060 Salix purpurea SapurV1A.0529s0060 I 0.866
Thhalv10016998m.g Eutrema salsugineum Thhalv10016998m.g I 0.866
PK07850.1 Cannabis sativa PK07850.1 I 0.866
chr5.LjT42F22.20.nc Lotus japonicus chr5.LjT42F22.20.nc I 0.866
chr1.CM0318.250.nd Lotus japonicus chr1.CM0318.250.nd I 0.864
AMTR_s00070p00149100 Amborella trichopoda AMTR_s00070p00149100 I 0.861
PRUPE_ppa006134mg Prunus persica PRUPE_ppa006134mg I 0.861
Pm016406 Prunus mume Pm016406 I 0.861
GLYMA15G42680 Glycine max GLYMA15G42680 I 0.857
Si017194m.g Setaria italica Si017194m.g I 0.857
Cla015469 Citrullus lanatus Cla015469 I 0.857
e_gw1.34.393.1 Physcomitrella patens e_gw1.34.393.1 I 0.857
LPERR08G16800 Leersia perrieri LPERR08G16800 I 0.856
LPERR09G10800 Leersia perrieri LPERR09G10800 I 0.856
PK14093.1 Cannabis sativa PK14093.1 I 0.856
cassava36544.valid.m1 Manihot esculenta cassava36544.valid.m1 I 0.855
GLYMA19G32600 Glycine max GLYMA19G32600 I 0.851
GLYMA12G36750 Glycine max GLYMA12G36750 I 0.849
GLYMA13G27455 Glycine max GLYMA13G27455 I 0.849
MTR_3g027650 Medicago truncatula MTR_3g027650 I 0.849
MTR_3g028520 Medicago truncatula MTR_3g028520 I 0.849
evm.TU.contig_45766 Carica papaya evm.TU.contig_45766 I 0.849
MTR_4g033295 Medicago truncatula MTR_4g033295 I 0.846
PGSC0003DMG400023852 Solanum tuberosum PGSC0003DMG400023852 I 0.846
POPTR_0001s27680 Populus trichocarpa POPTR_0001s27680 I 0.846
Solyc12g100140.1 Solanum lycopersicum Solyc12g100140.1 I 0.846
PDK_20s1302565g001 Phoenix dactylifera PDK_20s1302565g001 I 0.846
SapurV1A.0071s0010 Salix purpurea SapurV1A.0071s0010 I 0.845
SapurV1A.0402s0180 Salix purpurea SapurV1A.0402s0180 I 0.845
AT2G42280 Arabidopsis thaliana AT2G42280 D 0.844
POPTR_0003s22290 Populus trichocarpa POPTR_0003s22290 I 0.844
scaffold_403077.1 Arabidopsis lyrata scaffold_403077.1 I 0.844
VIT_06s0004g01740 Vitis vinifera VIT_06s0004g01740 I 0.844
30169.m006403 Ricinus communis 30169.m006403 I 0.844
Cagra.2636s0012 Capsella grandiflora Cagra.2636s0012 I 0.844
Carubv10023498m.g Capsella rubella Carubv10023498m.g I 0.844
MDP0000307685 Malus domestica MDP0000307685 I 0.844
SapurV1A.0009s0400 Salix purpurea SapurV1A.0009s0400 I 0.844
Eucgr.G03396 Eucalyptus grandis Eucgr.G03396 I 0.842