CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pc12g01260
(
Penicillium chrysogenum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Pc12g01260
T052207_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_07553
M01110_2.00
Aspergillus nidulans
CACGTGGN
NCCACGTG
PBM
Lambert et al.(2019)
pEX0377
0.884
0.885
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pc12g01260.t1
bHLH
366
417
LRVTHKLAERKRRSEMKDCFEALRLRLPPGQTNKSSKWETLTRAIDYIAMLE
Links
Other
bHLH
family TFs
Other
Penicillium chrysogenum
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30217.m000254
Ricinus communis
30217.m000254
N
0.000
AMTR_s00013p00252260
Amborella trichopoda
AMTR_s00013p00252260
N
0.000
AT4G13040
Arabidopsis thaliana
AT4G13040
N
0.000
BGIOSGA008254
Oryza indica
BGIOSGA008254
N
0.000
Bo11579s010
Brassica oleracea
Bo11579s010
N
0.000
Bo8g033910
Brassica oleracea
Bo8g033910
N
0.000
Bostr.2021s0045
Boechera stricta
Bostr.2021s0045
N
0.000
Bra034895
Brassica rapa
Bra034895
N
0.000
BRADI3G43822
Brachypodium distachyon
BRADI3G43822
N
0.000
Cagra.2997s0002
Capsella grandiflora
Cagra.2997s0002
N
0.000
Carubv10005663m.g
Capsella rubella
Carubv10005663m.g
N
0.000
cassava38073.valid.m1
Manihot esculenta
cassava38073.valid.m1
N
0.000
cassava6828.valid.m1
Manihot esculenta
cassava6828.valid.m1
N
0.000
Ca_11707
Cicer arietinum
Ca_11707
N
0.000
Ca_17230
Cicer arietinum
Ca_17230
N
0.000
chr1.LjT46N10.100.nd
Lotus japonicus
chr1.LjT46N10.100.nd
N
0.000
chr3.CM0423.200.nd
Lotus japonicus
chr3.CM0423.200.nd
N
0.000
Ciclev10021891m.g
Citrus clementina
Ciclev10021891m.g
N
0.000
Cla015151
Citrullus lanatus
Cla015151
N
0.000
Cucsa.078000
Cucumis sativus
Cucsa.078000
N
0.000
Cucsa.150110
Cucumis sativus
Cucsa.150110
N
0.000
estExt_fgenesh1_pg.C_930051
Physcomitrella patens
estExt_fgenesh1_pg.C_930051
N
0.000
Eucgr.K02136
Eucalyptus grandis
Eucgr.K02136
N
0.000
evm.TU.supercontig_21.106
Carica papaya
evm.TU.supercontig_21.106
N
0.000
e_gw1.317.27.1
Physcomitrella patens
e_gw1.317.27.1
N
0.000
F775_30629
Aegilops tauschii
F775_30629
N
0.000
GLYMA08G46250
Glycine max
GLYMA08G46250
N
0.000
GLYMA18G33460
Glycine max
GLYMA18G33460
N
0.000
Gorai.001G105100
Gossypium raimondii
Gorai.001G105100
N
0.000
Gorai.001G188300
Gossypium raimondii
Gorai.001G188300
N
0.000
Gorai.001G231300
Gossypium raimondii
Gorai.001G231300
N
0.000
Gorai.007G156300
Gossypium raimondii
Gorai.007G156300
N
0.000
GSMUA_Achr6G06510_001
Musa acuminata
GSMUA_Achr6G06510_001
N
0.000
GSMUA_Achr8G00300_001
Musa acuminata
GSMUA_Achr8G00300_001
N
0.000
GSMUA_Achr9G01590_001
Musa acuminata
GSMUA_Achr9G01590_001
N
0.000
LPERR02G13930
Leersia perrieri
LPERR02G13930
N
0.000
Lus10011836.g
Linum usitatissimum
Lus10011836.g
N
0.000
Lus10022769.g
Linum usitatissimum
Lus10022769.g
N
0.000
MDP0000129941
Malus domestica
MDP0000129941
N
0.000
MDP0000300382
Malus domestica
MDP0000300382
N
0.000
MDP0000675982
Malus domestica
MDP0000675982
N
0.000
mgf003491m
Mimulus guttatus
mgf003491m
N
0.000
mgf003727m
Mimulus guttatus
mgf003727m
N
0.000
mgf007349m
Mimulus guttatus
mgf007349m
N
0.000
MTR_7g055857
Medicago truncatula
MTR_7g055857
N
0.000
MTR_8g012655
Medicago truncatula
MTR_8g012655
N
0.000
OB02G25330
Oryza brachyantha
OB02G25330
N
0.000
OBART02G17450
Oryza barthii
OBART02G17450
N
0.000
OGLUM02G17700
Oryza glumaepatula
OGLUM02G17700
N
0.000
OLONG_009588
Oryza longistaminata
OLONG_009588
N
0.000
ONIVA02G18870
Oryza nivara
ONIVA02G18870
N
0.000
OPUNC02G15530
Oryza punctata
OPUNC02G15530
N
0.000
orange1.1g025914m.g
Citrus sinensis
orange1.1g025914m.g
N
0.000
ORGLA02G0152600
Oryza glaberrima
ORGLA02G0152600
N
0.000
ORUFI02G18290
Oryza rufipogon
ORUFI02G18290
N
0.000
OS02G0499000
Oryza sativa
OS02G0499000
N
0.000
Pavir.Aa01947
Panicum virgatum
Pavir.Aa01947
N
0.000
Pavir.J28064
Panicum virgatum
Pavir.J28064
N
0.000
PDK_20s1512801g001
Phoenix dactylifera
PDK_20s1512801g001
N
0.000
PGSC0003DMG400017485
Solanum tuberosum
PGSC0003DMG400017485
N
0.000
PK01824.1
Cannabis sativa
PK01824.1
N
0.000
Pm020315
Prunus mume
Pm020315
N
0.000
POPTR_0002s24750
Populus trichocarpa
POPTR_0002s24750
N
0.000
PRUPE_ppa011812mg
Prunus persica
PRUPE_ppa011812mg
N
0.000
Sb04g020150
Sorghum bicolor
Sb04g020150
N
0.000
SELMODRAFT_420254
Selaginella moellendorffii
SELMODRAFT_420254
N
0.000
SELMODRAFT_443366
Selaginella moellendorffii
SELMODRAFT_443366
N
0.000
Si018306m.g
Setaria italica
Si018306m.g
N
0.000
Solyc09g059510.2
Solanum lycopersicum
Solyc09g059510.2
N
0.000
TCM_002835
Theobroma cacao
TCM_002835
N
0.000
Thhalv10026242m.g
Eutrema salsugineum
Thhalv10026242m.g
N
0.000
Traes_6AL_13895C140
Triticum aestivum
Traes_6AL_13895C140
N
0.000
Traes_6DS_43372C0A6
Triticum aestivum
Traes_6DS_43372C0A6
N
0.000
TRIUR3_27883
Triticum urartu
TRIUR3_27883
N
0.000
VIT_00s0184g00010
Vitis vinifera
VIT_00s0184g00010
N
0.000