TEF (Ochotona princeps)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSOPRG00000013592 T060841_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tef
M01803_2.00 		Mus musculus
NVTTRYVNNN
NNNBRYAABN		 PBM
Weirauch et al.(2014)
pTH5078 		0.890 0.968
TEF
M02849_2.00 		Homo sapiens
NRTTAYGTAAYN
NRTTACRTAAYN		 SELEX
Jolma et al.(2013)
TEF_1 		0.890 0.968
TEF
M02850_2.00 		Homo sapiens
NVTTAYGTAABN
NVTTACRTAABN		 SELEX
Jolma et al.(2013)
TEF_2 		0.890 0.968
TEF
M04325_2.00 		Homo sapiens
NRTTACGTAAYN
NRTTACGTAAYN		 SELEX
Yin et al.(2017)
TEF_eDBD_HT-SELEX 		0.890 0.968
TEF
M09983_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_05 		0.890 0.968
TEF
M09984_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_06 		0.890 0.968
TEF
M09985_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_Q6 		0.890 0.968
TEF
M09986_2.00 		Homo sapiens
MTKAYGTAAY
RTTACRTMAK		 Transfac
Matys et al.(2006)
V$VBP_01 		0.890 0.968
TEF
M04326_2.00 		Homo sapiens
NRTTACRTAAYN
NRTTAYGTAAYN		 SELEX
Yin et al.(2017)
TEF_eDBD_Methyl-HT-SELEX 		0.890 0.968
HLF
M02831_2.00 		Homo sapiens
NRTTAYRTAABN
NVTTAYRTAAYN		 SELEX
Jolma et al.(2013)
HLF_1 		0.846 0.762
Hlf
M02860_2.00 		Mus musculus
KRTTACGTAAYN
NRTTACGTAAYM		 SELEX
Jolma et al.(2013)
Hlf_1 		0.846 0.762
HLF
M04245_2.00 		Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN		 SELEX
Yin et al.(2017)
HLF_FL_HT-SELEX 		0.846 0.762
HLF
M04016_2.00 		Homo sapiens
RTKAYRTAAB
VTTAYRTMAY		 SELEX
Rodriguez-Martinez et al.(2017)
HLF.1 		0.846 0.762
HLF
M08786_2.00 		Homo sapiens
NRTTRYGTAAYMS
SKRTTACRYAAYN		 Misc
Kulakovskiy et al.(2013)
HLF_HUMAN.H11MO.0.C 		0.846 0.762
Hlf
M08815_2.00 		Mus musculus
VTTRTGYAABH
DVTTRCAYAAB		 Misc
Kulakovskiy et al.(2013)
HLF_MOUSE.H11MO.0.C 		0.846 0.762
HLF
M09937_2.00 		Homo sapiens
ATKRYGTAAY
RTTACRYMAT		 Transfac
Matys et al.(2006)
V$HLF_01 		0.846 0.762
HLF
M04246_2.00 		Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN		 SELEX
Yin et al.(2017)
HLF_FL_Methyl-HT-SELEX 		0.846 0.762
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000012389 bZIP 178 240

Links

Other bZIP family TFs
Other Ochotona princeps TFs

184 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00004p00169140 Amborella trichopoda AMTR_s00004p00169140 N
Aquca_020_00103 Aquilegia coerulea Aquca_020_00103 N
Bo8g066360 Brassica oleracea Bo8g066360 N
Bostr.7128s0147 Boechera stricta Bostr.7128s0147 N
Bra016665 Brassica rapa Bra016665 N
Bra021136 Brassica rapa Bra021136 N
Cagra.2238s0088 Capsella grandiflora Cagra.2238s0088 N
Carubv10009517m.g Capsella rubella Carubv10009517m.g N
cassava13512.valid.m1 Manihot esculenta cassava13512.valid.m1 N
cassava13513.valid.m1 Manihot esculenta cassava13513.valid.m1 N
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N
Ca_19192 Cicer arietinum Ca_19192 N
chr3.CM0142.530.nd Lotus japonicus chr3.CM0142.530.nd N
chr4.CM0234.40.nc Lotus japonicus chr4.CM0234.40.nc N
Ciclev10010753m.g Citrus clementina Ciclev10010753m.g N
Cla012920 Citrullus lanatus Cla012920 N
Cla016961 Citrullus lanatus Cla016961 N
Cucsa.096390 Cucumis sativus Cucsa.096390 N
Cucsa.132180 Cucumis sativus Cucsa.132180 N
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N
GLYMA04G23780 Glycine max GLYMA04G23780 N
GLYMA04G23980 Glycine max GLYMA04G23980 N
GLYMA06G25310 Glycine max GLYMA06G25310 N
GLYMA06G30350 Glycine max GLYMA06G30350 N
GLYMA06G30590 Glycine max GLYMA06G30590 N
GLYMA13G44230 Glycine max GLYMA13G44230 N
GLYMA15G01040 Glycine max GLYMA15G01040 N
Gorai.009G016600 Gossypium raimondii Gorai.009G016600 N
Gorai.010G062800 Gossypium raimondii Gorai.010G062800 N
Gorai.011G083900 Gossypium raimondii Gorai.011G083900 N
Lus10019406.g Linum usitatissimum Lus10019406.g N
MBD10 Arabidopsis thaliana AT1G15340 N
MBD10 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001305 N
MDP0000152128 Malus domestica MDP0000152128 N
MDP0000248422 Malus domestica MDP0000248422 N
MDP0000375866 Malus domestica MDP0000375866 N
MDP0000574053 Malus domestica MDP0000574053 N
MTR_0339s0020 Medicago truncatula MTR_0339s0020 N
MTR_4g114770 Medicago truncatula MTR_4g114770 N
MTR_4g114785 Medicago truncatula MTR_4g114785 N
orange1.1g022412m.g Citrus sinensis orange1.1g022412m.g N
PGSC0003DMG400002913 Solanum tuberosum PGSC0003DMG400002913 N
PK04144.1 Cannabis sativa PK04144.1 N
Pm027560 Prunus mume Pm027560 N
POPTR_0018s12980 Populus trichocarpa POPTR_0018s12980 N
PRUPE_ppa008789mg Prunus persica PRUPE_ppa008789mg N
PRUPE_ppa009989mg Prunus persica PRUPE_ppa009989mg N
SapurV1A.0034s0480 Salix purpurea SapurV1A.0034s0480 N
SapurV1A.1100s0070 Salix purpurea SapurV1A.1100s0070 N
Solyc07g008170.2 Solanum lycopersicum Solyc07g008170.2 N
Solyc12g009590.1 Solanum lycopersicum Solyc12g009590.1 N
TCM_027169 Theobroma cacao TCM_027169 N
TCM_038107 Theobroma cacao TCM_038107 N
Thhalv10007967m.g Eutrema salsugineum Thhalv10007967m.g N
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N
VIT_11s0016g05580 Vitis vinifera VIT_11s0016g05580 N