Lus10006489.g (Linum usitatissimum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Lus10006489.g T072012_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ABF2
M01771_2.00 		Arabidopsis thaliana
NNYACGTGTHNNN
NNNDACACGTRNN		 PBM
Weirauch et al.(2014)
pTH8103 		0.789 0.797
ABF2
M06755_2.00 		Arabidopsis thaliana
NNWNNTGMCACGTSWBMH
DKVWSACGTGKCANNWNN		 Dap-seq
OMalley et al.(2016)
ABF2_col_v3a 		0.789 0.797
OS08G0471950
M10047_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TRAB1_Q2 		0.786 0.644
PK18009.1
M01158_2.00 		Cannabis sativa
NNACACGTGN
NCACGTGTNN		 PBM
Lambert et al.(2019)
pTH10272 		0.786 0.729
ABF4
M01056_2.00 		Arabidopsis thaliana
NNMCACGTGKNN
NNMCACGTGKNN		 PBM
Sullivan et al.(2014)
pTH7315 		0.786 0.729
ABF4
M01057_2.00 		Arabidopsis thaliana
NDMYAVNWNN
NNWNBTRKHN		 PBM
Sullivan et al.(2014)
pTH7551 		0.786 0.729
ABF4
M09911_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF4_Q2 		0.786 0.729
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10006489 bZIP 329 387

Links

Other bZIP family TFs
Other Linum usitatissimum TFs

174 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29625.m000702 Ricinus communis 29625.m000702 I 0.811
29801.m003176 Ricinus communis 29801.m003176 I 0.783
30055.m001548 Ricinus communis 30055.m001548 I 0.786
30170.m013868 Ricinus communis 30170.m013868 I 0.817
ABF2 Arabidopsis thaliana AT1G45249 D 0.789
ABF2 Arabidopsis lyrata fgenesh2_kg.1__3804__AT1G45249.1 I 0.789
ABF2 Vitis vinifera VIT_18s0001g10450 I 0.805
ABF4 Arabidopsis thaliana AT3G19290 D 0.786
ABF4 Arabidopsis lyrata fgenesh2_kg.3__2145__AT3G19290.1 I 0.786
ABI5 Arabidopsis thaliana AT2G36270 D 0.806
ABI5 Populus trichocarpa POPTR_0006s08300 I 0.801
AMTR_s00114p00031980 Amborella trichopoda AMTR_s00114p00031980 I 0.801
AMTR_s00132p00065700 Amborella trichopoda AMTR_s00132p00065700 I 0.819
Aquca_072_00142 Aquilegia coerulea Aquca_072_00142 I 0.791
BGIOSGA004837 Oryza indica BGIOSGA004837 I 0.795
BGIOSGA028831 Oryza indica BGIOSGA028831 I 0.789
BGIOSGA030899 Oryza indica BGIOSGA030899 I 0.800
Bo1g007700 Brassica oleracea Bo1g007700 I 0.793
Bo5g115300 Brassica oleracea Bo5g115300 I 0.783
Bo6g006970 Brassica oleracea Bo6g006970 I 0.789
Bo7g116570 Brassica oleracea Bo7g116570 I 0.783
Bostr.12302s0127 Boechera stricta Bostr.12302s0127 I 0.785
Bostr.19424s0732 Boechera stricta Bostr.19424s0732 I 0.783
Bra022409 Brassica rapa Bra022409 I 0.783
Bra037533 Brassica rapa Bra037533 I 0.783
Bra040260 Brassica rapa Bra040260 I 0.789
BRADI3G38200 Brachypodium distachyon BRADI3G38200 I 0.793
Cagra.10917s0002 Capsella grandiflora Cagra.10917s0002 I 0.789
Cagra.4978s0002 Capsella grandiflora Cagra.4978s0002 I 0.786
Carubv10009177m.g Capsella rubella Carubv10009177m.g I 0.789
Carubv10013729m.g Capsella rubella Carubv10013729m.g I 0.786
cassava11518.m1 Manihot esculenta cassava11518.m1 I 0.806
cassava12275.valid.m1 Manihot esculenta cassava12275.valid.m1 I 0.817
cassava16074.m1 Manihot esculenta cassava16074.m1 I 0.787
cassava32856.m1 Manihot esculenta cassava32856.m1 I 0.801
cassava42669.valid.m1 Manihot esculenta cassava42669.valid.m1 I 0.817
Ca_00791 Cicer arietinum Ca_00791 I 0.791
Ca_01548 Cicer arietinum Ca_01548 I 0.815
chr1.CM0010.310.nd Lotus japonicus chr1.CM0010.310.nd I 0.796
Ciclev10001159m.g Citrus clementina Ciclev10001159m.g I 0.818
Ciclev10028435m.g Citrus clementina Ciclev10028435m.g I 0.790
Cla016272 Citrullus lanatus Cla016272 I 0.800
Cla022926 Citrullus lanatus Cla022926 I 0.798
Cucsa.219780 Cucumis sativus Cucsa.219780 I 0.800
Cucsa.241090 Cucumis sativus Cucsa.241090 I 0.782
Cucsa.396070 Cucumis sativus Cucsa.396070 I 0.798
DPBF2 Vitis vinifera VIT_06s0080g00340 I 0.789
Eucgr.F02337 Eucalyptus grandis Eucgr.F02337 I 0.817
evm.TU.supercontig_49.26 Carica papaya evm.TU.supercontig_49.26 I 0.820
evm.TU.supercontig_62.4 Carica papaya evm.TU.supercontig_62.4 I 0.783
F775_32479 Aegilops tauschii F775_32479 I 0.792
gene09110-v1.0-hybrid Fragaria vesca gene09110-v1.0-hybrid I 0.804
gene28250-v1.0-hybrid Fragaria vesca gene28250-v1.0-hybrid I 0.795
GLYMA04G04170 Glycine max GLYMA04G04170 I 0.815
GLYMA06G04353 Glycine max GLYMA06G04353 I 0.815
GLYMA10G08370 Glycine max GLYMA10G08370 I 0.792
GLYMA13G22061 Glycine max GLYMA13G22061 I 0.806
GLYMA19G37910 Glycine max GLYMA19G37910 I 0.796
Gorai.002G240500 Gossypium raimondii Gorai.002G240500 I 0.786
Gorai.005G102300 Gossypium raimondii Gorai.005G102300 I 0.809
Gorai.005G237400 Gossypium raimondii Gorai.005G237400 I 0.788
Gorai.006G155600 Gossypium raimondii Gorai.006G155600 I 0.782
Gorai.009G212600 Gossypium raimondii Gorai.009G212600 I 0.809
Gorai.009G275700 Gossypium raimondii Gorai.009G275700 I 0.808
Gorai.013G044500 Gossypium raimondii Gorai.013G044500 I 0.788
GRMZM2G002075 Zea mays GRMZM2G002075 I 0.799
GRMZM2G157722 Zea mays GRMZM2G157722 I 0.812
GRMZM2G168079 Zea mays GRMZM2G168079 I 0.794
GRMZM2G478417 Zea mays GRMZM2G478417 I 0.812
GSMUA_Achr3G22710_001 Musa acuminata GSMUA_Achr3G22710_001 I 0.795
GSMUA_Achr5G24570_001 Musa acuminata GSMUA_Achr5G24570_001 I 0.791
GSMUA_Achr6G30550_001 Musa acuminata GSMUA_Achr6G30550_001 I 0.810
GSMUA_Achr8G07740_001 Musa acuminata GSMUA_Achr8G07740_001 I 0.787
GSMUA_Achr9G27130_001 Musa acuminata GSMUA_Achr9G27130_001 I 0.796
LjT07K13.110.nd Lotus japonicus LjT07K13.110.nd I 0.799
LPERR01G32620 Leersia perrieri LPERR01G32620 I 0.795
LPERR08G14740 Leersia perrieri LPERR08G14740 I 0.789
LPERR09G09170 Leersia perrieri LPERR09G09170 I 0.797
Lus10002399.g Linum usitatissimum Lus10002399.g I 0.795
Lus10009755.g Linum usitatissimum Lus10009755.g I 0.806
Lus10014194.g Linum usitatissimum Lus10014194.g I 0.811
Lus10017049.g Linum usitatissimum Lus10017049.g I 0.825
Lus10021369.g Linum usitatissimum Lus10021369.g I 0.792
Lus10022720.g Linum usitatissimum Lus10022720.g I 0.811
MDP0000248567 Malus domestica MDP0000248567 I 0.788
MDP0000296303 Malus domestica MDP0000296303 I 0.798
MDP0000701734 Malus domestica MDP0000701734 I 0.789
mgf002047m Mimulus guttatus mgf002047m I 0.797
mgf002176m Mimulus guttatus mgf002176m I 0.783
mgf007524m Mimulus guttatus mgf007524m I 0.797
mgf014602m Mimulus guttatus mgf014602m I 0.797
mgf020824m Mimulus guttatus mgf020824m I 0.793
MLOC_34679 Hordeum vulgare MLOC_34679 I 0.792
MLOC_61490 Hordeum vulgare MLOC_61490 I 0.793
MTR_3g101780 Medicago truncatula MTR_3g101780 I 0.818
MTR_7g104480 Medicago truncatula MTR_7g104480 I 0.791
OB01G46760 Oryza brachyantha OB01G46760 I 0.795
OB08G24950 Oryza brachyantha OB08G24950 I 0.789
OBART01G37980 Oryza barthii OBART01G37980 I 0.795
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I 0.795
OGLUM08G18640 Oryza glumaepatula OGLUM08G18640 I 0.788
OGLUM09G13130 Oryza glumaepatula OGLUM09G13130 I 0.800
OLONG_014546 Oryza longistaminata OLONG_014546 I 0.795
OMERI01G34950 Oryza meridionalis OMERI01G34950 I 0.795
OMERI09G10130 Oryza meridionalis OMERI09G10130 I 0.800
ONIVA04G25730 Oryza nivara ONIVA04G25730 I 0.795
OPUNC05G18710 Oryza punctata OPUNC05G18710 I 0.792
OPUNC08G15700 Oryza punctata OPUNC08G15700 I 0.789
OPUNC09G11090 Oryza punctata OPUNC09G11090 I 0.800
orange1.1g013197m.g Citrus sinensis orange1.1g013197m.g I 0.790
orange1.1g021624m.g Citrus sinensis orange1.1g021624m.g I 0.820
orange1.1g025340m.g Citrus sinensis orange1.1g025340m.g I 0.818
orange1.1g037676m.g Citrus sinensis orange1.1g037676m.g I 0.783
ORGLA01G0317900 Oryza glaberrima ORGLA01G0317900 I 0.795
ORGLA08G0211300 Oryza glaberrima ORGLA08G0211300 I 0.789
ORGLA09G0097200 Oryza glaberrima ORGLA09G0097200 I 0.800
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I 0.795
ORUFI08G19970 Oryza rufipogon ORUFI08G19970 I 0.789
OS01G0859300 Oryza sativa OS01G0859300 I 0.795
OS08G0471950 Oryza sativa OS08G0471950 D 0.786
OS09G0456200 Oryza sativa OS09G0456200 I 0.800
Pavir.Fa00674 Panicum virgatum Pavir.Fa00674 I 0.800
Pavir.J35078 Panicum virgatum Pavir.J35078 I 0.794
PGSC0003DMG400002660 Solanum tuberosum PGSC0003DMG400002660 I 0.787
PGSC0003DMG400008011 Solanum tuberosum PGSC0003DMG400008011 I 0.820
PGSC0003DMG400025889 Solanum tuberosum PGSC0003DMG400025889 I 0.783
PK02169.1 Cannabis sativa PK02169.1 I 0.809
PK18009.1 Cannabis sativa PK18009.1 D 0.786
Pm001315 Prunus mume Pm001315 I 0.786
Pm005288 Prunus mume Pm005288 I 0.784
Pm021430 Prunus mume Pm021430 I 0.795
POPTR_0002s12710 Populus trichocarpa POPTR_0002s12710 I 0.817
POPTR_0009s16610 Populus trichocarpa POPTR_0009s16610 I 0.788
POPTR_0014s02810 Populus trichocarpa POPTR_0014s02810 I 0.817
PRUPE_ppa006503mg Prunus persica PRUPE_ppa006503mg I 0.796
PRUPE_ppa006752mg Prunus persica PRUPE_ppa006752mg I 0.795
SapurV1A.0001s2050 Salix purpurea SapurV1A.0001s2050 I 0.793
SapurV1A.0167s0060 Salix purpurea SapurV1A.0167s0060 I 0.817
SapurV1A.0374s0070 Salix purpurea SapurV1A.0374s0070 I 0.788
SapurV1A.0643s0160 Salix purpurea SapurV1A.0643s0160 I 0.783
SapurV1A.0878s0160 Salix purpurea SapurV1A.0878s0160 I 0.817
SapurV1A.3185s0030 Salix purpurea SapurV1A.3185s0030 I 0.783
Sb06g026410 Sorghum bicolor Sb06g026410 I 0.787
Sb07g022965 Sorghum bicolor Sb07g022965 I 0.812
SELMODRAFT_227594 Selaginella moellendorffii SELMODRAFT_227594 I 0.786
SELMODRAFT_266892 Selaginella moellendorffii SELMODRAFT_266892 I 0.782
SELMODRAFT_428822 Selaginella moellendorffii SELMODRAFT_428822 I 0.782
SELMODRAFT_443424 Selaginella moellendorffii SELMODRAFT_443424 I 0.786
SELMODRAFT_451399 Selaginella moellendorffii SELMODRAFT_451399 I 0.786
SELMODRAFT_91900 Selaginella moellendorffii SELMODRAFT_91900 I 0.790
SELMODRAFT_94516 Selaginella moellendorffii SELMODRAFT_94516 I 0.790
Si013904m.g Setaria italica Si013904m.g I 0.798
Si030114m.g Setaria italica Si030114m.g I 0.783
Solyc01g108080.2 Solanum lycopersicum Solyc01g108080.2 I 0.783
Solyc04g078840.2 Solanum lycopersicum Solyc04g078840.2 I 0.820
Solyc09g009490.2 Solanum lycopersicum Solyc09g009490.2 I 0.782
TCM_007074 Theobroma cacao TCM_007074 I 0.788
TCM_022574 Theobroma cacao TCM_022574 I 0.789
TCM_033824 Theobroma cacao TCM_033824 I 0.820
Thhalv10011493m.g Eutrema salsugineum Thhalv10011493m.g I 0.793
Thhalv10020772m.g Eutrema salsugineum Thhalv10020772m.g I 0.783
Thhalv10025203m.g Eutrema salsugineum Thhalv10025203m.g I 0.783
TRAES3BF099600130CFD_g Triticum aestivum TRAES3BF099600130CFD_g I 0.792
TRAES3BF111600130CFD_g Triticum aestivum TRAES3BF111600130CFD_g I 0.792
TRAES3BF111600160CFD_g Triticum aestivum TRAES3BF111600160CFD_g I 0.792
Traes_3AL_FC5523394 Triticum aestivum Traes_3AL_FC5523394 I 0.792
Traes_4AS_F9C171219 Triticum aestivum Traes_4AS_F9C171219 I 0.793
Traes_4BL_4C9A415F3 Triticum aestivum Traes_4BL_4C9A415F3 I 0.793
Traes_4DL_F38ED7FB6 Triticum aestivum Traes_4DL_F38ED7FB6 I 0.793
TRIUR3_15490 Triticum urartu TRIUR3_15490 I 0.793
TRIUR3_29638 Triticum urartu TRIUR3_29638 I 0.782
TRIUR3_31111 Triticum urartu TRIUR3_31111 I 0.792
VIT_03s0063g00310 Vitis vinifera VIT_03s0063g00310 I 0.783
VIT_18s0001g04500 Vitis vinifera VIT_18s0001g04500 I 0.784