CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AGABI2DRAFT_206880
(
Agaricus bisporus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
AGABI2DRAFT_206880
T080325_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
cre-1
M01198_2.00
Neurospora crassa
CCCCRNNN
NNNYGGGG
PBM
Lambert et al.(2019)
pTH8711
0.797
0.826
RO3G_16591
M01442_2.00
Rhizopus oryzae
NCCCCRCDNN
NNHGYGGGGN
PBM
Najafabadi et al.(2015a)
pTH10231
0.791
0.783
MIG1
M00026_2.00
Saccharomyces cerevisiae
HCCCCRCN
NGYGGGGD
PBM
Badis et al.(2008)
MIG1_2106
0.758
0.739
MIG1
M01532_2.00
Saccharomyces cerevisiae
NCYCCRBNNN
NNNVYGGRGN
PBM
Zhu et al.(2009)
Mig1
0.758
0.739
MIG1
M07456_2.00
Saccharomyces cerevisiae
NCCCCRS
SYGGGGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0337.1
0.758
0.739
MIG1
M08523_2.00
Saccharomyces cerevisiae
NCCCCRS
SYGGGGN
Misc
DeBoer et al.(2011)
YGL035C_555
0.758
0.739
MIG1
M08524_2.00
Saccharomyces cerevisiae
CCCCRSWWWW
WWWWSYGGGG
Misc
DeBoer et al.(2011)
YGL035C_654
0.758
0.739
MIG1
M10391_2.00
Saccharomyces cerevisiae
NHCCCCRSDTWWWWDDM
KHHWWWWAHSYGGGGDN
Transfac
Matys et al.(2006)
F$MIG1_01
0.758
0.739
MIG1
M10392_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MIG1_03
0.758
0.739
MIG1
M10393_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MIG1_Q6
0.758
0.739
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EKV45690
C2H2 ZF
15
39
YKCPYVLCGRAFSRLEHQTRHIRTH
EKV45690
C2H2 ZF
45
69
FVCAFPGCEKRFSRSDELTRHSRIH
Links
Other
C2H2 ZF
family TFs
Other
Agaricus bisporus
TFs
279 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACAC_0000239001
Angiostrongylus cantonensis
ACAC_0000239001
I
ACAC_0000409401
Angiostrongylus cantonensis
ACAC_0000409401
I
ACAC_0001180201
Angiostrongylus cantonensis
ACAC_0001180201
I
ACOC_0001326501
Angiostrongylus costaricensis
ACOC_0001326501
I
ANCCAN_03474
Ancylostoma caninum
ANCCAN_03474
I
ANCCAN_09370
Ancylostoma caninum
ANCCAN_09370
N
ANCCAN_12539
Ancylostoma caninum
ANCCAN_12539
I
ANCCEY_03357
Ancylostoma ceylanicum
ANCCEY_03357
I
ANCCEY_05105
Ancylostoma ceylanicum
ANCCEY_05105
I
ANCDUO_09404
Ancylostoma duodenale
ANCDUO_09404
N
ASIM_0001301101
Anisakis simplex
ASIM_0001301101
I
ASIM_0001309901
Anisakis simplex
ASIM_0001309901
I
ASU_01199
Ascaris suum
ASU_01199
I
ASU_04305
Ascaris suum
ASU_04305
I
Bm12053
Brugia malayi
Bm12053
I
Bm2389
Brugia malayi
Bm2389
I
Bm4894
Brugia malayi
Bm4894
I
BTMF_0000225801
Brugia timori
BTMF_0000225801
N
BTMF_0001198801
Brugia timori
BTMF_0001198801
I
BXY_0008800
Bursaphelenchus xylophilus
BXY_0008800
I
BXY_0740100
Bursaphelenchus xylophilus
BXY_0740100
I
BXY_1595900
Bursaphelenchus xylophilus
BXY_1595900
I
BXY_1600300
Bursaphelenchus xylophilus
BXY_1600300
I
CBG06052
Caenorhabditis briggsae
CBG06052
I
CBG17744
Caenorhabditis briggsae
CBG17744
I
CBG19594
Caenorhabditis briggsae
CBG19594
I
CBG19604
Caenorhabditis briggsae
CBG19604
I
CBN07936
Caenorhabditis brenneri
CBN07936
I
CBN13729
Caenorhabditis brenneri
CBN13729
I
CBN18797
Caenorhabditis brenneri
CBN18797
I
CBN20828
Caenorhabditis brenneri
CBN20828
I
CBN25890
Caenorhabditis brenneri
CBN25890
N
CBN26258
Caenorhabditis brenneri
CBN26258
I
CBN31048
Caenorhabditis brenneri
CBN31048
I
CJA04720
Caenorhabditis japonica
CJA04720
I
CJA08328
Caenorhabditis japonica
CJA08328
I
CRE06661
Caenorhabditis remanei
CRE06661
I
CRE06667
Caenorhabditis remanei
CRE06667
I
CRE10161
Caenorhabditis remanei
CRE10161
I
CRE12779
Caenorhabditis remanei
CRE12779
I
DICVIV_02348
Dictyocaulus viviparus
DICVIV_02348
I
DICVIV_10822
Dictyocaulus viviparus
DICVIV_10822
I
DME_0000188101
Dracunculus medinensis
DME_0000188101
I
DME_0000742401
Dracunculus medinensis
DME_0000742401
I
DME_0000960901
Dracunculus medinensis
DME_0000960901
I
EVEC_0001115901
Enterobius vermicularis
EVEC_0001115901
I
genemark-nMf.1.1.scaf00140-processed-gene-0.6
Meloidogyne floridensis
genemark-nMf.1.1.scaf00140-processed-gene-0.6
I
GPLIN_000268400
Globodera pallida
GPLIN_000268400
I
GPLIN_001106000
Globodera pallida
GPLIN_001106000
I
GPUH_0000393501
Gongylonema pulchrum
GPUH_0000393501
I
Hba_06510
Heterorhabditis bacteriophora
Hba_06510
I
Hba_14163
Heterorhabditis bacteriophora
Hba_14163
I
Hba_14958
Heterorhabditis bacteriophora
Hba_14958
I
HCOI00435200
Haemonchus contortus
HCOI00435200
I
HCOI00769300
Haemonchus contortus
HCOI00769300
I
HCOI01268300
Haemonchus contortus
HCOI01268300
I
HCOI01406200
Haemonchus contortus
HCOI01406200
I
HCOI01716000
Haemonchus contortus
HCOI01716000
I
HPBE_0001043101
Heligmosomoides bakeri
HPBE_0001043101
I
HPLM_0001092501
Haemonchus placei
HPLM_0001092501
I
HPLM_0001680701
Haemonchus placei
HPLM_0001680701
I
L596_g20569
Steinernema carpocapsae
L596_g20569
I
L596_g25297
Steinernema carpocapsae
L596_g25297
I
L596_g27086
Steinernema carpocapsae
L596_g27086
I
L596_g3809
Steinernema carpocapsae
L596_g3809
I
L889_g29204
Steinernema feltiae
L889_g29204
I
L889_g5777
Steinernema feltiae
L889_g5777
I
L889_g8361
Steinernema feltiae
L889_g8361
I
L889_g8621
Steinernema feltiae
L889_g8621
I
L893_g27201
Steinernema glaseri
L893_g27201
I
L893_g29388
Steinernema glaseri
L893_g29388
I
L893_g32432
Steinernema glaseri
L893_g32432
I
L893_g6878
Steinernema glaseri
L893_g6878
I
L898_g10316
Steinernema monticolum
L898_g10316
I
L898_g24498
Steinernema monticolum
L898_g24498
I
L898_g2799
Steinernema monticolum
L898_g2799
I
L898_g4801
Steinernema monticolum
L898_g4801
I
LOAG_01074
Loa loa
LOAG_01074
I
LOAG_05485
Loa loa
LOAG_05485
I
maker-nMf.1.1.scaf03124-snap-gene-0.5
Meloidogyne floridensis
maker-nMf.1.1.scaf03124-snap-gene-0.5
N
MhA1_Contig984.frz3.gene20
Meloidogyne hapla
MhA1_Contig984.frz3.gene20
I
Minc15420
Meloidogyne incognita
Minc15420
I
nAv.1.0.1.g01698
Acanthocheilonema viteae
nAv.1.0.1.g01698
I
nAv.1.0.1.g09235
Acanthocheilonema viteae
nAv.1.0.1.g09235
N
NBR_0000170601
Nippostrongylus brasiliensis
NBR_0000170601
I
NBR_0001013001
Nippostrongylus brasiliensis
NBR_0001013001
I
NBR_0001432001
Nippostrongylus brasiliensis
NBR_0001432001
I
nDi.2.2.2.g02781
Dirofilaria immitis
nDi.2.2.2.g02781
I
nDi.2.2.2.g03563
Dirofilaria immitis
nDi.2.2.2.g03563
I
NECAME_05125
Necator americanus
NECAME_05125
I
NECAME_12696
Necator americanus
NECAME_12696
I
nhr-119
Caenorhabditis elegans
WBGene00003709
I
nhr-31
Caenorhabditis elegans
WBGene00003625
I
nhr-7
Caenorhabditis elegans
WBGene00003606
D
nhr-88
Caenorhabditis elegans
WBGene00003678
I
nLs.2.1.2.g08709
Litomosoides sigmodontis
nLs.2.1.2.g08709
I
nOo.2.0.1.g02048
Onchocerca ochengi
nOo.2.0.1.g02048
N
nOo.2.0.1.g04046
Onchocerca ochengi
nOo.2.0.1.g04046
I
OESDEN_02652
Oesophagostomum dentatum
OESDEN_02652
I
OESDEN_12257
Oesophagostomum dentatum
OESDEN_12257
I
OESDEN_17109
Oesophagostomum dentatum
OESDEN_17109
I
OFLC_0001511801
Onchocerca flexuosa
OFLC_0001511801
I
PEQ_0000633601
Parascaris equorum
PEQ_0000633601
I
Ppa-nhr-31
Pristionchus pacificus
PPA24219
I
PPA21285
Pristionchus pacificus
PPA21285
I
PTRK_0000207700
Parastrongyloides trichosuri
PTRK_0000207700
I
PTRK_0000497300
Parastrongyloides trichosuri
PTRK_0000497300
I
PTRK_0000510500
Parastrongyloides trichosuri
PTRK_0000510500
I
PTRK_0000775900
Parastrongyloides trichosuri
PTRK_0000775900
I
RSKR_0000832300
Rhabditophanes kr3021
RSKR_0000832300
I
RSKR_0000868400
Rhabditophanes kr3021
RSKR_0000868400
N
scaffold51-EXSNAP2012.23
Pristionchus exspectatus
scaffold51-EXSNAP2012.23
I
scaffold601-EXSNAP2012.19
Pristionchus exspectatus
scaffold601-EXSNAP2012.19
I
SMUV_0000212501
Syphacia muris
SMUV_0000212501
I
SMUV_0000859101
Syphacia muris
SMUV_0000859101
I
snap_masked-nMf.1.1.scaf24311-processed-gene-0.3
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf24311-processed-gene-0.3
I
SPAL_0000110800
Strongyloides papillosus
SPAL_0000110800
I
SPAL_0000620000
Strongyloides papillosus
SPAL_0000620000
I
SPAL_0001157400
Strongyloides papillosus
SPAL_0001157400
I
SPAL_0001436300
Strongyloides papillosus
SPAL_0001436300
I
SSTP_0000217700
Strongyloides stercoralis
SSTP_0000217700
I
SSTP_0000662400
Strongyloides stercoralis
SSTP_0000662400
I
SSTP_0000831700
Strongyloides stercoralis
SSTP_0000831700
I
SSTP_0001234400
Strongyloides stercoralis
SSTP_0001234400
I
SVE_0137800
Strongyloides venezuelensis
SVE_0137800
I
SVE_0301400
Strongyloides venezuelensis
SVE_0301400
I
SVE_1633700
Strongyloides venezuelensis
SVE_1633700
I
SVE_1965700
Strongyloides venezuelensis
SVE_1965700
I
TCLT_0000173501
Thelazia callipaeda
TCLT_0000173501
I
TELCIR_05080
Teladorsagia circumcincta
TELCIR_05080
I
TELCIR_07363
Teladorsagia circumcincta
TELCIR_07363
I
WBGene00241236
Onchocerca volvulus
WBGene00241236
I
WBGene00248075
Onchocerca volvulus
WBGene00248075
I
WUBG_10752
Wuchereria bancrofti
WUBG_10752
I