ENSAMXG00000006043 (Astyanax mexicanus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSAMXG00000006043 T087130_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF148
M10238_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CACCCBINDINGFACTOR_Q6 		0.813 0.957
ZNF148
M10239_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZBP89_Q4_01 		0.813 0.957
ZNF148
M10240_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZBP89_Q4 		0.813 0.957
Zfp281
M00139_2.00 		Mus musculus
NHDCCCCCHH
DDGGGGGHDN		 PBM
Badis et al.(2009)
Zfp281_0973 		0.759 0.804
ZNF281
M04509_2.00 		Homo sapiens
SCCCCTCCCCCM
KGGGGGAGGGGS		 SELEX
Yin et al.(2017)
ZNF281_eDBD_HT-SELEX 		0.759 0.804
ZNF281
M08321_2.00 		Homo sapiens
BNCCCCTCCCCC
GGGGGAGGGGNV		 ChIP-seq
Schmitges et al.(2016)
Q9Y2X9_1-4.RCADE 		0.759 0.804
Zfp281
M08025_2.00 		Mus musculus
CCCCWCCCCCMVCHB
VDGBKGGGGGWGGGG		 ChIP-seq
Chen et al.(2011)
GSE11329_zfp281 		0.759 0.804
ZNF281
M08906_2.00 		Homo sapiens
BCCCCTCCCCCHNYN
NRNDGGGGGAGGGGV		 Misc
Kulakovskiy et al.(2013)
ZN281_HUMAN.H11MO.0.A 		0.759 0.804
Zfp281
M08999_2.00 		Mus musculus
CCCCTCCCCCMMCBB
VVGKKGGGGGAGGGG		 Misc
Kulakovskiy et al.(2013)
ZN281_MOUSE.H11MO.0.A 		0.759 0.804
ZNF281
M10237_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZFP281_01 		0.759 0.804
ZNF281
M04510_2.00 		Homo sapiens
RCCCMTCCCCCR
YGGGGGAKGGGY		 SELEX
Yin et al.(2017)
ZNF281_eDBD_Methyl-HT-SELEX 		0.759 0.804
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMXP00000006197 C2H2 ZF 180 202
ENSAMXP00000006197 C2H2 ZF 208 230
ENSAMXP00000006197 C2H2 ZF 236 258
ENSAMXP00000006197 C2H2 ZF 264 287

Links

Other C2H2 ZF family TFs
Other Astyanax mexicanus TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00133p00071910 Amborella trichopoda AMTR_s00133p00071910 I
Aquca_025_00152 Aquilegia coerulea Aquca_025_00152 N
ATMYB35 Vitis vinifera VIT_14s0066g02180 N
ATMYB35 Populus trichocarpa POPTR_0017s11140 N
ATMYB35 Arabidopsis lyrata fgenesh2_kg.5__614__AT3G28470.1 N
BGIOSGA010923 Oryza indica BGIOSGA010923 I
BGIOSGA017601 Oryza indica BGIOSGA017601 I
Bo7g091360 Brassica oleracea Bo7g091360 N
Bostr.0556s0504 Boechera stricta Bostr.0556s0504 N
Bra002448 Brassica rapa Bra002448 I
Bra025337 Brassica rapa Bra025337 N
Cagra.2310s0015 Capsella grandiflora Cagra.2310s0015 N
Carubv10017650m.g Capsella rubella Carubv10017650m.g N
cassava26191.m1 Manihot esculenta cassava26191.m1 N
cassava27944.m1 Manihot esculenta cassava27944.m1 N
Ca_10555 Cicer arietinum Ca_10555 N
Ciclev10013340m.g Citrus clementina Ciclev10013340m.g I
Ciclev10023930m.g Citrus clementina Ciclev10023930m.g N
Cla019436 Citrullus lanatus Cla019436 N
Cucsa.197410 Cucumis sativus Cucsa.197410 N
Cucsa.339230 Cucumis sativus Cucsa.339230 N
estExt_Genewise1.C_360117 Physcomitrella patens estExt_Genewise1.C_360117 N
Eucgr.C02280 Eucalyptus grandis Eucgr.C02280 I
Eucgr.C02391 Eucalyptus grandis Eucgr.C02391 I
Eucgr.I02017 Eucalyptus grandis Eucgr.I02017 I
evm.TU.contig_28309.2 Carica papaya evm.TU.contig_28309.2 I
e_gw1.284.46.1 Physcomitrella patens e_gw1.284.46.1 N
e_gw1.46.242.1 Physcomitrella patens e_gw1.46.242.1 N
F775_14388 Aegilops tauschii F775_14388 I
gene01311-v1.0-hybrid Fragaria vesca gene01311-v1.0-hybrid N
GLYMA13G04920 Glycine max GLYMA13G04920 I
GLYMA19G02090 Glycine max GLYMA19G02090 I
Gorai.010G139300 Gossypium raimondii Gorai.010G139300 N
GRMZM2G069325 Zea mays GRMZM2G069325 I
GRMZM2G308034 Zea mays GRMZM2G308034 I
GSMUA_Achr3G10060_001 Musa acuminata GSMUA_Achr3G10060_001 I
gw1.65.181.1 Physcomitrella patens gw1.65.181.1 N
LPERR03G12200 Leersia perrieri LPERR03G12200 I
LPERR05G20870 Leersia perrieri LPERR05G20870 I
LPERR12G16630 Leersia perrieri LPERR12G16630 N
Lus10005834.g Linum usitatissimum Lus10005834.g N
Lus10033119.g Linum usitatissimum Lus10033119.g N
Lus10036660.g Linum usitatissimum Lus10036660.g N
Lus10039462.g Linum usitatissimum Lus10039462.g N
MDP0000258046 Malus domestica MDP0000258046 N
mgf012871m Mimulus guttatus mgf012871m I
MLOC_44167 Hordeum vulgare MLOC_44167 I
MTR_3g045430 Medicago truncatula MTR_3g045430 N
MTR_6g009430 Medicago truncatula MTR_6g009430 N
MYB35 Arabidopsis thaliana AT3G28470 N
OB03G23760 Oryza brachyantha OB03G23760 I
OBART03G13840 Oryza barthii OBART03G13840 I
OGLUM03G13980 Oryza glumaepatula OGLUM03G13980 I
OMERI03G12640 Oryza meridionalis OMERI03G12640 I
ONIVA03G15100 Oryza nivara ONIVA03G15100 I
OPUNC03G13320 Oryza punctata OPUNC03G13320 I
OPUNC12G18070 Oryza punctata OPUNC12G18070 I
orange1.1g043557m.g Citrus sinensis orange1.1g043557m.g I
ORGLA03G0133600 Oryza glaberrima ORGLA03G0133600 I
ORGLA05G0216200 Oryza glaberrima ORGLA05G0216200 I
ORUFI03G14500 Oryza rufipogon ORUFI03G14500 I
ORUFI05G26880 Oryza rufipogon ORUFI05G26880 I
OS05G0553400 Oryza sativa OS05G0553400 I
Pavir.Db01456 Panicum virgatum Pavir.Db01456 I
Pavir.J11789 Panicum virgatum Pavir.J11789 I
Pavir.J15551 Panicum virgatum Pavir.J15551 I
PDK_20s1379331g001 Phoenix dactylifera PDK_20s1379331g001 I
PDK_20s1406481g002 Phoenix dactylifera PDK_20s1406481g002 N
PGSC0003DMG400008532 Solanum tuberosum PGSC0003DMG400008532 I
Pm015813 Prunus mume Pm015813 N
Pm024633 Prunus mume Pm024633 N
POPTR_0012s07450 Populus trichocarpa POPTR_0012s07450 N
POPTR_0015s07900 Populus trichocarpa POPTR_0015s07900 N
PRUPE_ppa015976mg Prunus persica PRUPE_ppa015976mg N
PRUPE_ppa017571mg Prunus persica PRUPE_ppa017571mg N
SapurV1A.0138s0120 Salix purpurea SapurV1A.0138s0120 N
SapurV1A.0161s0110 Salix purpurea SapurV1A.0161s0110 N
SapurV1A.1048s0030 Salix purpurea SapurV1A.1048s0030 I
Sb01g038250 Sorghum bicolor Sb01g038250 I
Sb09g027800 Sorghum bicolor Sb09g027800 I
Si022874m.g Setaria italica Si022874m.g I
Solyc03g059200.1 Solanum lycopersicum Solyc03g059200.1 I
TCM_018082 Theobroma cacao TCM_018082 N
TCM_045715 Theobroma cacao TCM_045715 N
Thhalv10005502m.g Eutrema salsugineum Thhalv10005502m.g N
Traes_4AS_4EFBA88E4 Triticum aestivum Traes_4AS_4EFBA88E4 I
Traes_4BL_532725AD5 Triticum aestivum Traes_4BL_532725AD5 I
Traes_4DL_DFCF4A15A Triticum aestivum Traes_4DL_DFCF4A15A I
Traes_7AL_5B57EF9FC Triticum aestivum Traes_7AL_5B57EF9FC I
Traes_7DL_20EC9096A Triticum aestivum Traes_7DL_20EC9096A I
VIT_17s0000g05400 Vitis vinifera VIT_17s0000g05400 I