CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPFOG00000007738
(
Poecilia formosa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPFOG00000007738
T106200_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
scrt
M03673_2.00
Drosophila melanogaster
RHGCAACAGGTGK
MCACCTGTTGCDY
SELEX
Nitta et al.(2015)
scrt_1
0.792
0.841
scrt
M06085_2.00
Drosophila melanogaster
MCCACCTGTTG
CAACAGGTGGK
B1H
Zhu et al.(2011)
scrt_SANGER_2.5_FBgn0004880
0.792
0.841
scrt
M06086_2.00
Drosophila melanogaster
DNKCAACAGGTGK
MCACCTGTTGMNH
B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_1_FBgn0004880
0.792
0.841
scrt
M06087_2.00
Drosophila melanogaster
VMCACCTGTTGMN
NKCAACAGGTGKB
B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_2_FBgn0004880
0.792
0.841
CG12605
M03691_2.00
Drosophila melanogaster
RHGCAACAGGTGN
NCACCTGTTGCDY
SELEX
Nitta et al.(2015)
CG12605_1
0.788
0.832
CG12605
M06139_2.00
Drosophila melanogaster
CACCTGTKG
CMACAGGTG
B1H
Zhu et al.(2011)
CG12605_SANGER_10_FBgn0035481
0.788
0.832
CG12605
M06140_2.00
Drosophila melanogaster
MCACCTGTKGVNN
NNBCMACAGGTGK
B1H
Zhu et al.(2011)
CG12605_SOLEXA_5_FBgn0035481
0.788
0.832
SCRT1
M02929_2.00
Homo sapiens
RHKCAACAGGTGKNH
DNMCACCTGTTGMDY
SELEX
Jolma et al.(2013)
SCRT1_1
0.785
0.885
SCRT1
M04655_2.00
Homo sapiens
NKCAACAGGTD
HACCTGTTGMN
SELEX
Yin et al.(2017)
SCRT1_eDBD_HT-SELEX
0.785
0.885
SCRT1
M08397_2.00
Homo sapiens
RWKCAACAGGTG
CACCTGTTGMWY
ChIP-seq
Schmitges et al.(2016)
Q9BWW7_1-4.RCADE
0.785
0.885
SCRT1
M04656_2.00
Homo sapiens
NGCRACAGGTD
HACCTGTYGCN
SELEX
Yin et al.(2017)
SCRT1_eDBD_Methyl-HT-SELEX
0.785
0.885
SCRT2
M02925_2.00
Homo sapiens
RHGCAACAGGTGB
VCACCTGTTGCDY
SELEX
Jolma et al.(2013)
SCRT2_1
0.784
0.858
SCRT2
M04643_2.00
Homo sapiens
NGCAACAGGTD
HACCTGTTGCN
SELEX
Yin et al.(2017)
SCRT2_eDBD_HT-SELEX
0.784
0.858
SCRT2
M04644_2.00
Homo sapiens
NGCRACAGGTG
CACCTGTYGCN
SELEX
Yin et al.(2017)
SCRT2_eDBD_Methyl-HT-SELEX
0.784
0.858
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPFOP00000007667
C2H2 ZF
169
191
HTCNECGKTYATSSNLSRHKQTH
ENSPFOP00000007667
C2H2 ZF
201
222
KCPTCSKVYVSMPALAMHILTH
ENSPFOP00000007667
C2H2 ZF
226
248
HKCDVCSKAFSRPWLLQGHMRSH
ENSPFOP00000007667
C2H2 ZF
254
276
FACAHCGKAFADRSNLRAHMQTH
ENSPFOP00000007667
C2H2 ZF
282
303
YRCKRCNKTFALKSYLNKHYES
Links
Other
C2H2 ZF
family TFs
Other
Poecilia formosa
TFs
193 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL005176
Aedes aegypti
AAEL005176
I
0.790
AAEL009230
Aedes aegypti
AAEL009230
I
0.779
AAEL014359
Aedes aegypti
AAEL014359
I
0.779
AATE010651
Anopheles atroparvus
AATE010651
I
0.779
AATE020159
Anopheles atroparvus
AATE020159
I
0.790
ACHR010032
Anopheles christyi
ACHR010032
I
0.790
ACOM031677
Anopheles coluzzii
ACOM031677
I
0.779
ACOM031685
Anopheles coluzzii
ACOM031685
I
0.790
ACUA003488
Anopheles culicifacies
ACUA003488
I
0.779
ACUA020861
Anopheles culicifacies
ACUA020861
I
0.779
ACUA022497
Anopheles culicifacies
ACUA022497
I
0.790
ACYPI004643
Acyrthosiphon pisum
ACYPI004643
I
0.780
ACYPI34938
Acyrthosiphon pisum
ACYPI34938
I
0.763
AFAF007486
Anopheles farauti
AFAF007486
I
0.790
AFAF017001
Anopheles farauti
AFAF017001
I
0.779
AFUN001835
Anopheles funestus
AFUN001835
I
0.779
AFUN002786
Anopheles funestus
AFUN002786
I
0.790
AGAP006791
Anopheles gambiae
AGAP006791
I
0.790
AGAP006794
Anopheles gambiae
AGAP006794
I
0.779
ALUE_0002049001
Ascaris lumbricoides
ALUE_0002049001
I
0.763
AMEC013076
Anopheles melas
AMEC013076
I
0.790
AMEC015586
Anopheles melas
AMEC015586
I
0.779
AMEM013788
Anopheles merus
AMEM013788
I
0.790
AMEM017035
Anopheles merus
AMEM017035
I
0.779
AQUA003879
Anopheles quadriannulatus
AQUA003879
I
0.790
ASIS012063
Anopheles sinensis
ASIS012063
I
0.779
ASIS022059
Anopheles sinensis
ASIS022059
I
0.790
ASTEI08595
Anopheles stephensi
ASTEI08595
I
0.779
A_07725
Schistosoma haematobium
A_07725
I
0.765
BGIBMGA000604
Bombyx mori
BGIBMGA000604
I
0.759
BGIBMGA000607
Bombyx mori
BGIBMGA000607
I
0.778
CapteG149623
Capitella teleta
CapteG149623
I
0.774
CapteG176021
Capitella teleta
CapteG176021
I
0.767
CapteG223614
Capitella teleta
CapteG223614
I
0.782
CapteG76620
Capitella teleta
CapteG76620
I
0.767
Cflo_09305--XP_001121064.1_APIME
Camponotus floridanus
Cflo_09305--XP_001121064.1_APIME
I
0.788
CG12605
Drosophila melanogaster
FBgn0035481
D
0.788
CGI_10023711
Crassostrea gigas
CGI_10023711
I
0.795
CLEC001353
Cimex lectularius
CLEC001353
I
0.790
Cmyd_10009565
Chelonia mydas
Cmyd_10009565
I
0.792
CPIJ004535
Culex quinquefasciatus
CPIJ004535
I
0.779
CPIJ017517
Culex quinquefasciatus
CPIJ017517
I
0.790
CpipJ_CPIJ004535
Culex pipiens
CpipJ_CPIJ004535
I
0.779
CpipJ_CPIJ017517
Culex pipiens
CpipJ_CPIJ017517
I
0.790
csin111588
Clonorchis sinensis
csin111588
I
0.765
D915_06717
Fasciola hepatica
D915_06717
I
0.767
D917_06340
Trichinella nativa
D917_06340
I
0.765
D918_03987
Trichuris suis
D918_03987
I
0.771
DAPPUDRAFT_14328
Daphnia pulex
DAPPUDRAFT_14328
I
0.763
ECPE_0000958201
Echinostoma caproni
ECPE_0000958201
I
0.767
EFV52761
Trichinella spiralis
EFV52761
I
0.765
ENSAMEG00000005557
Ailuropoda melanoleuca
ENSAMEG00000005557
I
0.785
ENSAMXG00000004776
Astyanax mexicanus
ENSAMXG00000004776
I
0.808
ENSAMXG00000018604
Astyanax mexicanus
ENSAMXG00000018604
I
0.816
ENSAMXG00000018733
Astyanax mexicanus
ENSAMXG00000018733
I
0.827
ENSAPLG00000011730
Anas platyrhynchos
ENSAPLG00000011730
I
0.799
ENSCPOG00000024058
Cavia porcellus
ENSCPOG00000024058
I
0.785
ENSCSAG00000008549
Chlorocebus sabaeus
ENSCSAG00000008549
I
0.785
ENSCSAG00000010473
Chlorocebus sabaeus
ENSCSAG00000010473
I
0.784
ENSFALG00000005718
Ficedula albicollis
ENSFALG00000005718
I
0.794
ENSGGOG00000015228
Gorilla gorilla
ENSGGOG00000015228
I
0.784
ENSGMOG00000000629
Gadus morhua
ENSGMOG00000000629
I
0.808
ENSGMOG00000019519
Gadus morhua
ENSGMOG00000019519
I
0.818
ENSLACG00000003588
Latimeria chalumnae
ENSLACG00000003588
I
0.806
ENSLOCG00000002246
Lepisosteus oculatus
ENSLOCG00000002246
I
0.802
ENSLOCG00000007573
Lepisosteus oculatus
ENSLOCG00000007573
I
0.806
ENSMEUG00000009675
Macropus eugenii
ENSMEUG00000009675
I
0.780
ENSMMUG00000017354
Macaca mulatta
ENSMMUG00000017354
I
0.784
ENSNLEG00000009420
Nomascus leucogenys
ENSNLEG00000009420
I
0.784
ENSOARG00000014008
Ovis aries
ENSOARG00000014008
I
0.785
ENSONIG00000003152
Oreochromis niloticus
ENSONIG00000003152
I
0.794
ENSONIG00000006007
Oreochromis niloticus
ENSONIG00000006007
I
0.806
ENSONIG00000016758
Oreochromis niloticus
ENSONIG00000016758
I
0.825
ENSONIG00000019809
Oreochromis niloticus
ENSONIG00000019809
I
0.806
ENSPANG00000017232
Papio anubis
ENSPANG00000017232
I
0.785
ENSPFOG00000005616
Poecilia formosa
ENSPFOG00000005616
I
0.806
ENSPFOG00000017719
Poecilia formosa
ENSPFOG00000017719
I
0.808
ENSSHAG00000001992
Sarcophilus harrisii
ENSSHAG00000001992
I
0.782
ENSSTOG00000023184
Ictidomys tridecemlineatus
ENSSTOG00000023184
I
0.785
ENSXMAG00000011590
Xiphophorus maculatus
ENSXMAG00000011590
I
0.827
ENSXMAG00000014491
Xiphophorus maculatus
ENSXMAG00000014491
I
0.808
ENSXMAG00000015353
Xiphophorus maculatus
ENSXMAG00000015353
I
0.806
estExt_fgenesh2_pm.C_2290002
Branchiostoma floridae
estExt_fgenesh2_pm.C_2290002
I
0.788
EVEC_0000710001
Enterobius vermicularis
EVEC_0000710001
I
0.765
GA11715
Drosophila pseudoobscura
FBgn0071765
I
0.788
GD13304
Drosophila simulans
FBgn0185023
I
0.788
GD13305
Drosophila simulans
FBgn0185024
I
0.788
GD13794
Drosophila simulans
FBgn0185494
I
0.792
GE20660
Drosophila yakuba
FBgn0237965
I
0.788
GE21392
Drosophila yakuba
FBgn0238652
I
0.792
GF24781
Drosophila ananassae
FBgn0101774
I
0.788
GF25020
Drosophila ananassae
FBgn0102012
I
0.792
GG14232
Drosophila erecta
FBgn0106493
I
0.788
GG15174
Drosophila erecta
FBgn0107427
I
0.792
GH15771
Drosophila grimshawi
FBgn0123242
I
0.792
GI12551
Drosophila mojavensis
FBgn0135308
I
0.792
GI12763
Drosophila mojavensis
FBgn0135520
I
0.776
GJ16103
Drosophila virilis
FBgn0203288
I
0.792
GJ16104
Drosophila virilis
FBgn0203289
I
0.776
GK16692
Drosophila willistoni
FBgn0218694
I
0.788
GK17507
Drosophila willistoni
FBgn0219506
I
0.792
GM11368
Drosophila sechellia
FBgn0166311
I
0.792
GM14024
Drosophila sechellia
FBgn0168953
I
0.788
GM14603
Drosophila sechellia
FBgn0169524
I
0.792
HHAL001092-PA
Halyomorpha halys
HHAL001092-PA
I
0.790
HHAL001095-PA
Halyomorpha halys
HHAL001095-PA
I
0.781
HMEL014701
Heliconius melpomene
HMEL014701
I
0.778
ISCW021315
Ixodes scapularis
ISCW021315
I
0.802
KGM_21493
Danaus plexippus
KGM_21493
I
0.778
L596_g15116
Steinernema carpocapsae
L596_g15116
I
0.763
L798_11766
Zootermopsis nevadensis
L798_11766
I
0.790
L889_g21793
Steinernema feltiae
L889_g21793
I
0.763
L892_g9690
Steinernema scapterisci
L892_g9690
I
0.763
L893_g27175
Steinernema glaseri
L893_g27175
I
0.761
L898_g5709
Steinernema monticolum
L898_g5709
I
0.763
LCUP005777
Lucilia cuprina
LCUP005777
I
0.786
LCUP005780
Lucilia cuprina
LCUP005780
I
0.792
LLOJ003272
Lutzomyia longipalpis
LLOJ003272
I
0.790
MCINX009925
Melitaea cinxia
MCINX009925
I
0.778
MDOA001622
Musca domestica
MDOA001622
I
0.784
MDOA005810
Musca domestica
MDOA005810
I
0.792
MESCA005876
Megaselia scalaris
MESCA005876
I
0.783
NEMVEDRAFT_v1g108258
Nematostella vectensis
NEMVEDRAFT_v1g108258
I
0.771
nRc.2.0.1.g22231
Romanomermis culicivorax
nRc.2.0.1.g22231
I
0.769
Ocbimv22039583m.g
Octopus bimaculoides
Ocbimv22039583m.g
I
0.788
Ogr05737
Ophisaurus gracilis
Ogr05737
I
0.804
PHUM474050
Pediculus humanus
PHUM474050
I
0.763
PHUM474180
Pediculus humanus
PHUM474180
I
0.790
PPAI000594
Phlebotomus papatasi
PPAI000594
I
0.781
PTRK_0000719800
Parastrongyloides trichosuri
PTRK_0000719800
I
0.770
Pvit_17685
Pogona vitticeps
Pvit_17685
I
0.782
PXEA_0002510801
Protopolystoma xenopodis
PXEA_0002510801
I
0.758
Sakowv30035375m.g
Saccoglossus kowalevskii
Sakowv30035375m.g
I
0.784
scrt
Drosophila melanogaster
FBgn0004880
D
0.792
SCRT1
Bos taurus
ENSBTAG00000046208
I
0.785
SCRT1
Callithrix jacchus
ENSCJAG00000021406
I
0.785
SCRT1
Dasypus novemcinctus
ENSDNOG00000043826
I
0.785
SCRT1
Homo sapiens
ENSG00000261678
D
0.785
SCRT1
Gasterosteus aculeatus
ENSGACG00000004072
I
0.806
SCRT1
Gorilla gorilla
ENSGGOG00000013612
I
0.785
SCRT1
Loxodonta africana
ENSLAFG00000031587
I
0.785
SCRT1
Macaca mulatta
ENSMMUG00000028886
I
0.784
Scrt1
Mus musculus
ENSMUSG00000048385
I
0.785
SCRT1
Otolemur garnettii
ENSOGAG00000026538
I
0.785
Scrt1
Rattus norvegicus
ENSRNOG00000025594
I
0.785
SCRT1
Sus scrofa
ENSSSCG00000025879
I
0.785
SCRT1
Takifugu rubripes
ENSTRUG00000012719
I
0.806
scrt1a
Danio rerio
ENSDARG00000100821
I
0.806
scrt1b
Danio rerio
ENSDARG00000040214
I
0.806
scrt1b
Gasterosteus aculeatus
ENSGACG00000008982
I
0.806
scrt1b
Oryzias latipes
ENSORLG00000008641
I
0.808
scrt1b
Tetraodon nigroviridis
ENSTNIG00000018384
I
0.808
scrt1b
Takifugu rubripes
ENSTRUG00000011637
I
0.808
SCRT2
Anolis carolinensis
ENSACAG00000016109
I
0.794
SCRT2
Callithrix jacchus
ENSCJAG00000020870
I
0.784
SCRT2
Cavia porcellus
ENSCPOG00000008447
I
0.784
scrt2
Danio rerio
ENSDARG00000056175
I
0.816
SCRT2
Dasypus novemcinctus
ENSDNOG00000002583
I
0.784
SCRT2
Felis catus
ENSFCAG00000010922
I
0.784
SCRT2
Homo sapiens
ENSG00000215397
D
0.784
scrt2
Gasterosteus aculeatus
ENSGACG00000011802
I
0.816
SCRT2
Gallus gallus
ENSGALG00000028912
I
0.792
SCRT2
Loxodonta africana
ENSLAFG00000030340
I
0.784
SCRT2
Meleagris gallopavo
ENSMGAG00000016579
I
0.792
SCRT2
Monodelphis domestica
ENSMODG00000019528
I
0.780
Scrt2
Mus musculus
ENSMUSG00000060257
I
0.784
SCRT2
Otolemur garnettii
ENSOGAG00000031187
I
0.784
scrt2
Oryzias latipes
ENSORLG00000015072
I
0.827
Scrt2
Rattus norvegicus
ENSRNOG00000005148
I
0.784
SCRT2
Taeniopygia guttata
ENSTGUG00000006801
I
0.792
scrt2
Tetraodon nigroviridis
ENSTNIG00000012473
I
0.827
scrt2
Takifugu rubripes
ENSTRUG00000007620
I
0.827
SCRT2
Tursiops truncatus
ENSTTRG00000007039
I
0.784
scrt2
Xenopus tropicalis
XB-GENE-5995512
I
0.792
SCUD_0000371801
Schistosoma curassoni
SCUD_0000371801
I
0.765
Sjc_0100840
Schistosoma japonicum
Sjc_0100840
I
0.765
SMAR010760
Strigamia maritima
SMAR010760
I
0.806
Smp_054430
Schistosoma mansoni
Smp_054430
I
0.765
SMRZ_0000904801
Schistosoma margrebowiei
SMRZ_0000904801
I
0.765
SMTD_0000188801
Schistosoma mattheei
SMTD_0000188801
I
0.765
SMU15013927
Schmidtea mediterranea
SMU15013927
I
0.765
SMUV_0000843501
Syphacia muris
SMUV_0000843501
I
0.765
SPAL_0000842500
Strongyloides papillosus
SPAL_0000842500
I
0.768
SPU_018393
Strongylocentrotus purpuratus
SPU_018393
I
0.792
SSTP_0000144900
Strongyloides stercoralis
SSTP_0000144900
I
0.770
SVE_1799900
Strongyloides venezuelensis
SVE_1799900
I
0.768
T265_09545
Opisthorchis viverrini
T265_09545
I
0.765
TCNE_0000669301
Toxocara canis
TCNE_0000669301
I
0.763
tetur08g05890
Tetranychus urticae
tetur08g05890
I
0.814
TMUE_s0027002700
Trichuris muris
TMUE_s0027002700
I
0.771
TRE_0000944501
Trichobilharzia regenti
TRE_0000944501
I
0.765
TriadG20314
Trichoplax adhaerens
TriadG20314
I
0.780
TTRE_0000441701
Trichuris trichiura
TTRE_0000441701
I
0.771