CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

CTCF *(Vicugna pacos)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	ENSVPAG00000004409	T113512_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
CTCF M02878_2.00	Homo sapiens	WGCGCCMYCTAGYGGYV	BRCCRCTAGRKGGCGCW	SELEX Jolma et al.(2013) CTCF_1	0.827	1.000
CTCF M05846_2.00	Homo sapiens	NNNNHBNVCKCCCCCHD	HDGGGGGMGBNVDNNNN	SMiLE-seq Isakova et al.(2017) CTCF	0.827	1.000
CTCF M08289_2.00	Homo sapiens	VGCGCCMCCTVSHGG	CCDSBAGGKGGCGCB	ChIP-seq Schmitges et al.(2016) P49711_3-7.RCADE	0.827	1.000
CTCF M07550_2.00	Homo sapiens	SYGCCMYCTDSTGGH	DCCASHAGRKGGCRS	ChIP-exo Rhee et al.(2011) CTCF_1	0.827	1.000
CTCF M07551_2.00	Homo sapiens	YTTTTDTTTTT	AAAAAHAAAAR	ChIP-exo Rhee et al.(2011) CTCF_2	0.827	1.000
CTCF M07552_2.00	Homo sapiens	AVACAGARDTCCHYTSTGT	ACASARDGGAHYTCTGTBT	ChIP-exo Rhee et al.(2011) CTCF_3	0.827	1.000
CTCF M08087_2.00	Homo sapiens	BRSYGCCMYCTRSTGGYNR	YNRCCASYAGRKGGCRSYV	ChIP-seq Mathelier et al.(2014) MA0139.1	0.827	1.000
CTCF M07862_2.00	Homo sapiens	VBRSYGCCMYCTRSYGGHNVN	NBNDCCRSYAGRKGGCRSYVB	ChIP-seq Gerstein et al.(2012) A549_CTCF_HudsonAlpha	0.827	1.000
CTCF M07863_2.00	Homo sapiens	BRSYGCCMYCTRSYGG	CCRSYAGRKGGCRSYV	ChIP-seq Gerstein et al.(2012) AG04449_CTCF_UW	0.827	1.000
CTCF M07864_2.00	Homo sapiens	RSYGCCMYCTRSTGG	CCASYAGRKGGCRSY	ChIP-seq Gerstein et al.(2012) AG04450_CTCF_UW	0.827	1.000
CTCF M07865_2.00	Homo sapiens	VBRSYGCCMYCTRSTG	CASYAGRKGGCRSYVB	ChIP-seq Gerstein et al.(2012) AG09309_CTCF_UW	0.827	1.000
CTCF M07866_2.00	Homo sapiens	SYGCCMYCTRSTGGY	RCCASYAGRKGGCRS	ChIP-seq Gerstein et al.(2012) AG09319_CTCF_UW	0.827	1.000
CTCF M07867_2.00	Homo sapiens	GCCMYCTDSTGGH	DCCASHAGRKGGC	ChIP-seq Gerstein et al.(2012) AG10803_CTCF_UW	0.827	1.000
CTCF M07868_2.00	Homo sapiens	SYGCCMYCTRSTGGY	RCCASYAGRKGGCRS	ChIP-seq Gerstein et al.(2012) AoAF_CTCF_UW	0.827	1.000
CTCF M07869_2.00	Homo sapiens	SYGCCMYCTRSYGGY	RCCRSYAGRKGGCRS	ChIP-seq Gerstein et al.(2012) BJ_CTCF_UW	0.827	1.000
CTCF M07870_2.00	Homo sapiens	SYGCCMYCTRSTGGY	RCCASYAGRKGGCRS	ChIP-seq Gerstein et al.(2012) Caco-2_CTCF_UW	0.827	1.000
CTCF M07871_2.00	Homo sapiens	GCCMYCTRSTGGYVR	YBRCCASYAGRKGGC	ChIP-seq Gerstein et al.(2012) Fibrobl_CTCF_UT-A	0.827	1.000
CTCF M07872_2.00	Homo sapiens	RSYGCCMYCTRSTGG	CCASYAGRKGGCRSY	ChIP-seq Gerstein et al.(2012) Gliobla_CTCF_UT-A	0.827	1.000
CTCF M07873_2.00	Homo sapiens	BNNBRSYGCCMYCTRSYGGYN	NRCCRSYAGRKGGCRSYVNNV	ChIP-seq Gerstein et al.(2012) GM06990_CTCF_UW	0.827	1.000
CTCF M07874_2.00	Homo sapiens	RSYGCCMYCTRSYGG	CCRSYAGRKGGCRSY	ChIP-seq Gerstein et al.(2012) GM12864_CTCF_UW	0.827	1.000
CTCF M07875_2.00	Homo sapiens	SYGCCMYCTRSYGGY	RCCRSYAGRKGGCRS	ChIP-seq Gerstein et al.(2012) GM12865_CTCF_UW	0.827	1.000
CTCF M07876_2.00	Homo sapiens	SYGCCMYCTRSYGGY	RCCRSYAGRKGGCRS	ChIP-seq Gerstein et al.(2012) GM12872_CTCF_UW	0.827	1.000
CTCF M07877_2.00	Homo sapiens	RSYGCCMYCTRSYGG	CCRSYAGRKGGCRSY	ChIP-seq Gerstein et al.(2012) GM12873_CTCF_UW	0.827	1.000
CTCF M07878_2.00	Homo sapiens	SYGCCMYCTRSYGGY	RCCRSYAGRKGGCRS	ChIP-seq Gerstein et al.(2012) GM12874_CTCF_UW	0.827	1.000
CTCF M07879_2.00	Homo sapiens	SYGCCMYCTRSYGGY	RCCRSYAGRKGGCRS	ChIP-seq Gerstein et al.(2012) GM12875_CTCF_UW	0.827	1.000
CTCF M07880_2.00	Homo sapiens	GCCMYCTRSTGGYNR	YNRCCASYAGRKGGC	ChIP-seq Gerstein et al.(2012) GM12878_CTCF_Broad	0.827	1.000
CTCF M07881_2.00	Homo sapiens	YGCCMYCTRSTGGHN	NDCCASYAGRKGGCR	ChIP-seq Gerstein et al.(2012) GM12878_CTCF_Stanford	0.827	1.000
CTCF M07882_2.00	Homo sapiens	YGCCMYCTRSTG	CASYAGRKGGCR	ChIP-seq Gerstein et al.(2012) GM12878_CTCF_UT-A	0.827	1.000
CTCF M07883_2.00	Homo sapiens	BRSYGCCMYCTRSTGGY	RCCASYAGRKGGCRSYV	ChIP-seq Gerstein et al.(2012) GM12878_CTCF_UW	0.827	1.000
CTCF M07884_2.00	Homo sapiens	SYGCCMYCTRSTGGH	DCCASYAGRKGGCRS	ChIP-seq Gerstein et al.(2012) H1-hESC_CTCF_Broad	0.827	1.000
CTCF M07885_2.00	Homo sapiens	SYGCCMYCTRSYGGH	DCCRSYAGRKGGCRS	ChIP-seq Gerstein et al.(2012) H1-hESC_CTCF_HudsonAlpha	0.827	1.000
CTCF M07886_2.00	Homo sapiens	SYGCCMYCTRSTGGY	RCCASYAGRKGGCRS	ChIP-seq Gerstein et al.(2012) HA-sp_CTCF_UW	0.827	1.000
CTCF M07887_2.00	Homo sapiens	RSYGCCMYCTDSTGGYNR	YNRCCASHAGRKGGCRSY	ChIP-seq Gerstein et al.(2012) HBMEC_CTCF_UW	0.827	1.000
CTCF M07888_2.00	Homo sapiens	YGCCMYCTRSTGGYN	NRCCASYAGRKGGCR	ChIP-seq Gerstein et al.(2012) HCFaa_CTCF_UW	0.827	1.000
CTCF M07889_2.00	Homo sapiens	YGCCMYCTDSTGGY	RCCASHAGRKGGCR	ChIP-seq Gerstein et al.(2012) HCPEpiC_CTCF_UW	0.827	1.000
CTCF M07890_2.00	Homo sapiens	YGCCMYCTRSTGG	CCASYAGRKGGCR	ChIP-seq Gerstein et al.(2012) HEEpiC_CTCF_UW	0.827	1.000
CTCF M07891_2.00	Homo sapiens	RSYGCCMYCTRSTGGYNR	YNRCCASYAGRKGGCRSY	ChIP-seq Gerstein et al.(2012) HEK293_CTCF_UW	0.827	1.000
CTCF M07892_2.00	Homo sapiens	DSYGCCMYCTRSTGG	CCASYAGRKGGCRSH	ChIP-seq Gerstein et al.(2012) HeLa-S3_CTCF_Broad	0.827	1.000
CTCF M07893_2.00	Homo sapiens	SYGCCMYCTRSTGGY	RCCASYAGRKGGCRS	ChIP-seq Gerstein et al.(2012) HeLa-S3_CTCF_UT-A	0.827	1.000
CTCF M07894_2.00	Homo sapiens	VBRSYGCCMYCTRSYGG	CCRSYAGRKGGCRSYVB	ChIP-seq Gerstein et al.(2012) HeLa-S3_CTCF_UW	0.827	1.000
CTCF M07895_2.00	Homo sapiens	VBRSYGCCMYCTRSTGGY	RCCASYAGRKGGCRSYVB	ChIP-seq Gerstein et al.(2012) HepG2_CTCF_Broad	0.827	1.000
CTCF M07896_2.00	Homo sapiens	RSYGCCMYCTRSTGG	CCASYAGRKGGCRSY	ChIP-seq Gerstein et al.(2012) HepG2_CTCF_HudsonAlpha	0.827	1.000
CTCF M07897_2.00	Homo sapiens	RSYGCCMYCTDSTGG	CCASHAGRKGGCRSY	ChIP-seq Gerstein et al.(2012) HepG2_CTCF_UT-A	0.827	1.000
CTCF M07898_2.00	Homo sapiens	YGCCMYCTRSTGGY	RCCASYAGRKGGCR	ChIP-seq Gerstein et al.(2012) HepG2_CTCF_UW	0.827	1.000
CTCF M07899_2.00	Homo sapiens	VBRSYGCCMYCTRSTGGYNR	YNRCCASYAGRKGGCRSYVB	ChIP-seq Gerstein et al.(2012) HMEC_CTCF_Broad	0.827	1.000
CTCF M07900_2.00	Homo sapiens	VBRSYGCCMYCTRSTGG	CCASYAGRKGGCRSYVB	ChIP-seq Gerstein et al.(2012) HMEC_CTCF_UW	0.827	1.000
CTCF M07901_2.00	Homo sapiens	CCMYCTRSTGG	CCASYAGRKGG	ChIP-seq Gerstein et al.(2012) HMF_CTCF_UW	0.827	1.000
CTCF M07902_2.00	Homo sapiens	RSYGCCMYCTRSTGG	CCASYAGRKGGCRSY	ChIP-seq Gerstein et al.(2012) HPAF_CTCF_UW	0.827	1.000
CTCF M07903_2.00	Homo sapiens	YGCCMYCTDSTGG	CCASHAGRKGGCR	ChIP-seq Gerstein et al.(2012) HPF_CTCF_UW	0.827	1.000
CTCF M07904_2.00	Homo sapiens	SYGCCMYCTRSTGGY	RCCASYAGRKGGCRS	ChIP-seq Gerstein et al.(2012) HRE_CTCF_UW	0.827	1.000
CTCF M07905_2.00	Homo sapiens	YGCCMYCTRSTG	CASYAGRKGGCR	ChIP-seq Gerstein et al.(2012) HRPEpiC_CTCF_UW	0.827	1.000
CTCF M07906_2.00	Homo sapiens	NNBRSYGCCMYCTDSTGG	CCASHAGRKGGCRSYVNN	ChIP-seq Gerstein et al.(2012) HSMM_CTCF_Broad	0.827	1.000
CTCF M07907_2.00	Homo sapiens	BRSYGCCMYCTDSTGGYN	NRCCASHAGRKGGCRSYV	ChIP-seq Gerstein et al.(2012) HSMMtube_CTCF_Broad	0.827	1.000
CTCF M07908_2.00	Homo sapiens	NVBRSYGCCMYCTRSYGGYNV	BNRCCRSYAGRKGGCRSYVBN	ChIP-seq Gerstein et al.(2012) HUVEC_CTCF_Broad	0.827	1.000
CTCF M07909_2.00	Homo sapiens	RSYRCCMYCTRSTGG	CCASYAGRKGGYRSY	ChIP-seq Gerstein et al.(2012) HUVEC_CTCF_UT-A	0.827	1.000
CTCF M07910_2.00	Homo sapiens	BNVBRSYGCCMYCTRSYGGH	DCCRSYAGRKGGCRSYVBNV	ChIP-seq Gerstein et al.(2012) HUVEC_CTCF_UW	0.827	1.000
CTCF M07911_2.00	Homo sapiens	RSYGCCMYCTRSYGGYNR	YNRCCRSYAGRKGGCRSY	ChIP-seq Gerstein et al.(2012) K562_CTCF_Broad	0.827	1.000
CTCF M07912_2.00	Homo sapiens	SYGCCMYCTDSTGGY	RCCASHAGRKGGCRS	ChIP-seq Gerstein et al.(2012) K562_CTCF_UT-A	0.827	1.000
CTCF M07913_2.00	Homo sapiens	SYGCCMYCTRSYGGY	RCCRSYAGRKGGCRS	ChIP-seq Gerstein et al.(2012) K562_CTCF_UW	0.827	1.000
CTCF M07914_2.00	Homo sapiens	SYGCCMYCTRSTGGH	DCCASYAGRKGGCRS	ChIP-seq Gerstein et al.(2012) MCF-7_CTCF_UT-A	0.827	1.000
CTCF M07915_2.00	Homo sapiens	BRSYGCCMYCTDSTGGYNRNN	NNYNRCCASHAGRKGGCRSYV	ChIP-seq Gerstein et al.(2012) NH-A_CTCF_Broad	0.827	1.000
CTCF M07916_2.00	Homo sapiens	BRSYGCCMYCTDSTGGY	RCCASHAGRKGGCRSYV	ChIP-seq Gerstein et al.(2012) NHDF-Ad_CTCF_Broad	0.827	1.000
CTCF M07917_2.00	Homo sapiens	SYGCCMYCTRSTGGH	DCCASYAGRKGGCRS	ChIP-seq Gerstein et al.(2012) NHEK_CTCF_Broad	0.827	1.000
CTCF M07918_2.00	Homo sapiens	SYGCCMYCTRSYGG	CCRSYAGRKGGCRS	ChIP-seq Gerstein et al.(2012) NHEK_CTCF_UW	0.827	1.000
CTCF M07919_2.00	Homo sapiens	RSYGCCMYCTRSTGG	CCASYAGRKGGCRSY	ChIP-seq Gerstein et al.(2012) NHLF_CTCF_Broad	0.827	1.000
CTCF M07920_2.00	Homo sapiens	DSYGCCMYCTDSTGGYNR	YNRCCASHAGRKGGCRSH	ChIP-seq Gerstein et al.(2012) Osteobl_CTCF_Broad	0.827	1.000
CTCF M07921_2.00	Homo sapiens	YGCCMYCTRSTGGYV	BRCCASYAGRKGGCR	ChIP-seq Gerstein et al.(2012) ProgFib_CTCF_UT-A	0.827	1.000
CTCF M07922_2.00	Homo sapiens	YGCCMYCTRSYGG	CCRSYAGRKGGCR	ChIP-seq Gerstein et al.(2012) SAEC_CTCF_UW	0.827	1.000
CTCF M07923_2.00	Homo sapiens	YGCCMYCTRSTGGYN	NRCCASYAGRKGGCR	ChIP-seq Gerstein et al.(2012) SK-N-SH_RA_UW	0.827	1.000
CTCF M07924_2.00	Homo sapiens	RSYGCCMYCTRSTGG	CCASYAGRKGGCRSY	ChIP-seq Gerstein et al.(2012) T-47D_CTCF_HudsonAlpha	0.827	1.000
CTCF M07925_2.00	Homo sapiens	RSYGCCMYCTRSTGG	CCASYAGRKGGCRSY	ChIP-seq Gerstein et al.(2012) WERI-Rb-1_CTCF_UW	0.827	1.000
Ctcf M08022_2.00	Mus musculus	RSYGCCMYCTDSTGG	CCASHAGRKGGCRSY	ChIP-seq Chen et al.(2011) SRP000217_Ctcf	0.827	1.000
CTCF M08238_2.00	Homo sapiens	GCGCCCYCTGSYGGY	RCCRSCAGRGGGCGC	ChIP-seq Najafabadi et al.(2015b) CTCF	0.827	1.000
CTCF M08869_2.00	Homo sapiens	BRSYGCCMYCTRSYGGYNR	YNRCCRSYAGRKGGCRSYV	Misc Kulakovskiy et al.(2013) CTCF_HUMAN.H11MO.0.A	0.827	1.000
Ctcf M08966_2.00	Mus musculus	VBRSYGCCMYCTRSYGGYNR	YNRCCRSYAGRKGGCRSYVB	Misc Kulakovskiy et al.(2013) CTCF_MOUSE.H11MO.0.A	0.827	1.000
CTCF M09503_2.00	Homo sapiens	NBRSYGCCMYCTRSTGGHHR	YDDCCASYAGRKGGCRSYVN	Misc Heinz et al.(2010) CD4+-CTCF_Barski_et_al._1	0.827	1.000
CTCF M09504_2.00	Homo sapiens	TGCAGTDCCNVNNNYDRCCA	TGGYHRNNNBNGGHACTGCA	Misc Heinz et al.(2010) CD4+-CTCF_Barski_et_al._2	0.827	1.000
CTCF M10152_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$CTCF_01	0.827	1.000
CTCF M10153_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$CTCF_02	0.827	1.000
CTCF M10154_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$CTCF_05	0.827	1.000
CTCF M10155_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$CTCF_06	0.827	1.000
CTCF M10156_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$CTCF_07	0.827	1.000
CTCF M10157_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$CTCF_08	0.827	1.000
CTCF M10158_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$CTCF_10	0.827	1.000
CTCF M10159_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$CTCF_Q3_01	0.827	1.000
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSVPAP00000004096	C2H2 ZF	266	288	FQCELCSYTCPRRSNLDRHMKSH
ENSVPAP00000004096	C2H2 ZF	294	316	HKCHLCGRAFRTVTLLRNHLNTH
ENSVPAP00000004096	C2H2 ZF	322	345	HKCPDCDMAFVTSGELVRHRRYKH
ENSVPAP00000004096	C2H2 ZF	351	373	FKCSMCDYASVEVSKLKRHIRSH
ENSVPAP00000004096	C2H2 ZF	379	401	FQCSLCSYASRDTYKLKRHMRTH
ENSVPAP00000004096	C2H2 ZF	407	430	YECYICHARFTQSGTMKMHILQKH
ENSVPAP00000004096	C2H2 ZF	437	460	FHCPHCDTVIARKSDLGVHLRKQH
ENSVPAP00000004096	C2H2 ZF	467	489	KKCRYCDAVFHERYALIQHQKSH
ENSVPAP00000004096	C2H2 ZF	495	517	FKCDQCDYACRQERHMIMHKRTH
ENSVPAP00000004096	C2H2 ZF	523	546	YACSHCDKTFRQKQLLDMHFKRYH
ENSVPAP00000004096	C2H2 ZF	555	575	FVCSKCGKTFTRRNTMARHAD

Links
Other C2H2 ZF family TFs
Other *Vicugna pacos* TFs

65 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
29917.m001977	Ricinus communis	29917.m001977	I
30147.m013937	Ricinus communis	30147.m013937	I
AMTR_s00096p00076220	Amborella trichopoda	AMTR_s00096p00076220	I
BGIOSGA022369	Oryza indica	BGIOSGA022369	I
BGIOSGA036541	Oryza indica	BGIOSGA036541	I
Bo1g019910	Brassica oleracea	Bo1g019910	I
Bo2g028290	Brassica oleracea	Bo2g028290	I
Bo3g018490	Brassica oleracea	Bo3g018490	I
Bo3g157300	Brassica oleracea	Bo3g157300	I
Bo7g106240	Brassica oleracea	Bo7g106240	I
Bostr.20821s0001	Boechera stricta	Bostr.20821s0001	N
Bostr.30275s0352	Boechera stricta	Bostr.30275s0352	I
Bra006744	Brassica rapa	Bra006744	I
Bra012579	Brassica rapa	Bra012579	I
Bra013346	Brassica rapa	Bra013346	I
Bra020346	Brassica rapa	Bra020346	I
Bra020992	Brassica rapa	Bra020992	I
Bra025299	Brassica rapa	Bra025299	I
Cagra.0891s0081	Capsella grandiflora	Cagra.0891s0081	I
Cagra.1398s0045	Capsella grandiflora	Cagra.1398s0045	N
Cagra.4306s0015	Capsella grandiflora	Cagra.4306s0015	I
Carubv10003695m.g	Capsella rubella	Carubv10003695m.g	N
Carubv10006734m.g	Capsella rubella	Carubv10006734m.g	I
Carubv10028458m.g	Capsella rubella	Carubv10028458m.g	I
cassava19706.m1	Manihot esculenta	cassava19706.m1	I
cassava26507.m1	Manihot esculenta	cassava26507.m1	N
cassava33974.m1	Manihot esculenta	cassava33974.m1	I
cassava9008.m1	Manihot esculenta	cassava9008.m1	I
Ca_07482	Cicer arietinum	Ca_07482	I
Ca_17087	Cicer arietinum	Ca_17087	I
Ca_17294	Cicer arietinum	Ca_17294	I
Ca_19427	Cicer arietinum	Ca_19427	I
chr4.CM0042.120.nd	Lotus japonicus	chr4.CM0042.120.nd	N
Ciclev10017526m.g	Citrus clementina	Ciclev10017526m.g	I
Ciclev10024427m.g	Citrus clementina	Ciclev10024427m.g	I
Cla019490	Citrullus lanatus	Cla019490	I
Cucsa.146980	Cucumis sativus	Cucsa.146980	N
Cucsa.196850	Cucumis sativus	Cucsa.196850	I
Eucgr.B00300	Eucalyptus grandis	Eucgr.B00300	I
Eucgr.B00301	Eucalyptus grandis	Eucgr.B00301	I
evm.TU.supercontig_112.44	Carica papaya	evm.TU.supercontig_112.44	N
evm.TU.supercontig_76.38	Carica papaya	evm.TU.supercontig_76.38	I
F775_22212	Aegilops tauschii	F775_22212	I
fgenesh2_kg.277__1__AT5G58850.1	Arabidopsis lyrata	fgenesh2_kg.277__1__AT5G58850.1	I
fgenesh2_kg.3__2684__AT5G58850.1	Arabidopsis lyrata	fgenesh2_kg.3__2684__AT5G58850.1	I
gene08006-v1.0-hybrid	Fragaria vesca	gene08006-v1.0-hybrid	I
gene32198-v1.0-hybrid	Fragaria vesca	gene32198-v1.0-hybrid	I
GLYMA05G02300	Glycine max	GLYMA05G02300	I
GLYMA05G08761	Glycine max	GLYMA05G08761	N
GLYMA06G19280	Glycine max	GLYMA06G19280	I
GLYMA18G07360	Glycine max	GLYMA18G07360	N
Gorai.001G263600	Gossypium raimondii	Gorai.001G263600	I
Gorai.008G295800	Gossypium raimondii	Gorai.008G295800	I
GRMZM2G302549	Zea mays	GRMZM2G302549	I
GRMZM5G870592	Zea mays	GRMZM5G870592	I
GSMUA_Achr3G19490_001	Musa acuminata	GSMUA_Achr3G19490_001	I
GSMUA_Achr6G06490_001	Musa acuminata	GSMUA_Achr6G06490_001	I
LjSGA_147332.1	Lotus japonicus	LjSGA_147332.1	N
LPERR06G03780	Leersia perrieri	LPERR06G03780	I
LPERR12G04190	Leersia perrieri	LPERR12G04190	I
Lus10002384.g	Linum usitatissimum	Lus10002384.g	I
Lus10027695.g	Linum usitatissimum	Lus10027695.g	I
Lus10039966.g	Linum usitatissimum	Lus10039966.g	I
Lus10042111.g	Linum usitatissimum	Lus10042111.g	I
MDP0000215359	Malus domestica	MDP0000215359	I
MDP0000319656	Malus domestica	MDP0000319656	I
mgf023372m	Mimulus guttatus	mgf023372m	I
MTR_3g077650	Medicago truncatula	MTR_3g077650	I
MTR_3g463400	Medicago truncatula	MTR_3g463400	N
MTR_4g105660	Medicago truncatula	MTR_4g105660	N
MTR_5g049190	Medicago truncatula	MTR_5g049190	I
MTR_5g070020	Medicago truncatula	MTR_5g070020	N
MYB118	Arabidopsis lyrata	fgenesh2_kg.5__560__AT3G27785.1	I
MYB118	Populus trichocarpa	POPTR_0001s35140	I
MYB98	Arabidopsis thaliana	AT4G18770	D
MYB98	Arabidopsis lyrata	scaffold_702543.1	I
MYB98	Vitis vinifera	VIT_17s0000g08550	I
OB06G13860	Oryza brachyantha	OB06G13860	I
OB12G14410	Oryza brachyantha	OB12G14410	I
OBART06G04170	Oryza barthii	OBART06G04170	I
OBART12G04480	Oryza barthii	OBART12G04480	I
OBART12G04500	Oryza barthii	OBART12G04500	I
OGLUM06G04280	Oryza glumaepatula	OGLUM06G04280	I
OGLUM12G05330	Oryza glumaepatula	OGLUM12G05330	I
OLONG_008158	Oryza longistaminata	OLONG_008158	I
OLONG_010000	Oryza longistaminata	OLONG_010000	I
OMERI06G04840	Oryza meridionalis	OMERI06G04840	I
OMERI12G02760	Oryza meridionalis	OMERI12G02760	I
ONIVA06G05390	Oryza nivara	ONIVA06G05390	I
ONIVA12G04220	Oryza nivara	ONIVA12G04220	I
OPUNC06G03990	Oryza punctata	OPUNC06G03990	I
OPUNC12G04510	Oryza punctata	OPUNC12G04510	I
orange1.1g044021m.g	Citrus sinensis	orange1.1g044021m.g	I
orange1.1g046859m.g	Citrus sinensis	orange1.1g046859m.g	I
ORGLA06G0038500	Oryza glaberrima	ORGLA06G0038500	I
ORGLA12G0042300	Oryza glaberrima	ORGLA12G0042300	I
ORUFI06G04170	Oryza rufipogon	ORUFI06G04170	I
ORUFI12G05180	Oryza rufipogon	ORUFI12G05180	I
OS06G0162700	Oryza sativa	OS06G0162700	I
Pavir.J02497	Panicum virgatum	Pavir.J02497	I
Pavir.J02718	Panicum virgatum	Pavir.J02718	I
Pavir.J25000	Panicum virgatum	Pavir.J25000	I
Pavir.J37434	Panicum virgatum	Pavir.J37434	I
PGSC0003DMG400036895	Solanum tuberosum	PGSC0003DMG400036895	I
PGSC0003DMG400044141	Solanum tuberosum	PGSC0003DMG400044141	N
Pm000541	Prunus mume	Pm000541	I
Pm024743	Prunus mume	Pm024743	I
POPTR_0005s12050	Populus trichocarpa	POPTR_0005s12050	I
POPTR_0015s08880	Populus trichocarpa	POPTR_0015s08880	I
PRUPE_ppa018123mg	Prunus persica	PRUPE_ppa018123mg	I
PRUPE_ppa026791mg	Prunus persica	PRUPE_ppa026791mg	I
SapurV1A.0396s0170	Salix purpurea	SapurV1A.0396s0170	I
SapurV1A.0571s0110	Salix purpurea	SapurV1A.0571s0110	I
SapurV1A.2163s0040	Salix purpurea	SapurV1A.2163s0040	I
Sb01g005100	Sorghum bicolor	Sb01g005100	I
Si039046m.g	Setaria italica	Si039046m.g	I
Solyc06g071520.1	Solanum lycopersicum	Solyc06g071520.1	I
Solyc06g076840.1	Solanum lycopersicum	Solyc06g076840.1	N
TCM_012087	Theobroma cacao	TCM_012087	I
TCM_041651	Theobroma cacao	TCM_041651	N
Thhalv10015404m.g	Eutrema salsugineum	Thhalv10015404m.g	N
Thhalv10016057m.g	Eutrema salsugineum	Thhalv10016057m.g	I
Thhalv10026824m.g	Eutrema salsugineum	Thhalv10026824m.g	I
Thhalv10027294m.g	Eutrema salsugineum	Thhalv10027294m.g	N
Traes_1BL_4D9406708	Triticum aestivum	Traes_1BL_4D9406708	I
Traes_7AS_A337F362A	Triticum aestivum	Traes_7AS_A337F362A	I
Traes_7BS_D28CCE3B8	Triticum aestivum	Traes_7BS_D28CCE3B8	I
Traes_7DS_E27ECBC6E	Triticum aestivum	Traes_7DS_E27ECBC6E	I
TRIUR3_12421	Triticum urartu	TRIUR3_12421	I

CTCF (Vicugna pacos) C2H2 ZF

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

65 Related TFs

CTCF **(Vicugna pacos)
C2H2 ZF**