CTRG_03974 (Candida tropicalis)
CBF/NF-Y

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02045 (CBFB_NFYA) IPR001289 CTRG_03974 T159877_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HAP2
M08452_2.00 		Saccharomyces cerevisiae
TTGGH
DCCAA		 COMPILED
Mathelier et al.(2014)
MA0313.1 		0.875 0.875
NFYA
M08104_2.00 		Homo sapiens
NSTGATTGGYB
VRCCAATCASN		 ChIP-seq
Mathelier et al.(2014)
MA0060.3 		0.732 0.732
NFYA
M09018_2.00 		Homo sapiens
YKBYSATTGGYYRV
BYRRCCAATSRVMR		 Misc
Kulakovskiy et al.(2013)
NFYA_HUMAN.H11MO.0.A 		0.732 0.732
Nfya
M09019_2.00 		Mus musculus
YKBYSATTGGYYRV
BYRRCCAATSRVMR		 Misc
Kulakovskiy et al.(2013)
NFYA_MOUSE.H11MO.0.A 		0.732 0.732
NFYA
M10403_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFYA_02 		0.732 0.732
NFYA
M10404_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFYA_Q5 		0.732 0.732
NFYA
M10405_2.00 		Homo sapiens
NYTGATTGGYTAVH
DBTARCCAATCARN		 Transfac
Matys et al.(2006)
V$NFY_C 		0.732 0.732
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EER32303 CBF/NF-Y 80 135

Links

Other CBF/NF-Y family TFs
Other Candida tropicalis TFs

439 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28629.m000575 Ricinus communis 28629.m000575 N
30032.m000479 Ricinus communis 30032.m000479 N
30055.m001588 Ricinus communis 30055.m001588 N
AMTR_s00040p00117430 Amborella trichopoda AMTR_s00040p00117430 N
anac090 Arabidopsis lyrata fgenesh2_kg.6__2228__AT5G22380.1 N
Aquca_005_00168 Aquilegia coerulea Aquca_005_00168 N
BGIOSGA004848 Oryza indica BGIOSGA004848 N
BGIOSGA034823 Oryza indica BGIOSGA034823 N
BGIOSGA037019 Oryza indica BGIOSGA037019 N
BRADI2G55780 Brachypodium distachyon BRADI2G55780 N
cassava13394.valid.m1 Manihot esculenta cassava13394.valid.m1 N
cassava14235.m1 Manihot esculenta cassava14235.m1 N
cassava15680.m1 Manihot esculenta cassava15680.m1 N
cassava15688.m1 Manihot esculenta cassava15688.m1 N
cassava32867.m1 Manihot esculenta cassava32867.m1 N
cassava3989.m1 Manihot esculenta cassava3989.m1 N
Ca_00818 Cicer arietinum Ca_00818 N
Ca_15160 Cicer arietinum Ca_15160 N
Ciclev10012468m.g Citrus clementina Ciclev10012468m.g N
Ciclev10029032m.g Citrus clementina Ciclev10029032m.g N
Cla003087 Citrullus lanatus Cla003087 I
Cla008777 Citrullus lanatus Cla008777 N
Cla018691 Citrullus lanatus Cla018691 N
Cucsa.083530 Cucumis sativus Cucsa.083530 N
Cucsa.185760 Cucumis sativus Cucsa.185760 N
Cucsa.319840 Cucumis sativus Cucsa.319840 I
Eucgr.A02635 Eucalyptus grandis Eucgr.A02635 N
Eucgr.A02636 Eucalyptus grandis Eucgr.A02636 N
Eucgr.A02637 Eucalyptus grandis Eucgr.A02637 N
Eucgr.A02638 Eucalyptus grandis Eucgr.A02638 N
Eucgr.A02639 Eucalyptus grandis Eucgr.A02639 N
Eucgr.C02446 Eucalyptus grandis Eucgr.C02446 N
Eucgr.I00587 Eucalyptus grandis Eucgr.I00587 N
Eucgr.J00505 Eucalyptus grandis Eucgr.J00505 N
Eucgr.J00508 Eucalyptus grandis Eucgr.J00508 N
Eucgr.J00511 Eucalyptus grandis Eucgr.J00511 N
Eucgr.J00512 Eucalyptus grandis Eucgr.J00512 N
Eucgr.J00513 Eucalyptus grandis Eucgr.J00513 N
Eucgr.J00514 Eucalyptus grandis Eucgr.J00514 N
Eucgr.J00517 Eucalyptus grandis Eucgr.J00517 N
Eucgr.J00518 Eucalyptus grandis Eucgr.J00518 N
Eucgr.J00519 Eucalyptus grandis Eucgr.J00519 N
Eucgr.J00520 Eucalyptus grandis Eucgr.J00520 N
evm.TU.supercontig_104.98 Carica papaya evm.TU.supercontig_104.98 N
evm.TU.supercontig_195.14 Carica papaya evm.TU.supercontig_195.14 N
F775_19761 Aegilops tauschii F775_19761 N
gene15644-v1.0-hybrid Fragaria vesca gene15644-v1.0-hybrid N
gene21734-v1.0-hybrid Fragaria vesca gene21734-v1.0-hybrid N
GLYMA03G35570 Glycine max GLYMA03G35570 N
GLYMA12G09670 Glycine max GLYMA12G09670 N
GLYMA12G31150 Glycine max GLYMA12G31150 N
GLYMA13G39160 Glycine max GLYMA13G39160 N
GLYMA19G38211 Glycine max GLYMA19G38211 N
Gorai.001G122800 Gossypium raimondii Gorai.001G122800 N
Gorai.002G238300 Gossypium raimondii Gorai.002G238300 N
Gorai.006G113000 Gossypium raimondii Gorai.006G113000 N
Gorai.009G399900 Gossypium raimondii Gorai.009G399900 N
GRMZM2G439903 Zea mays GRMZM2G439903 N
GRMZM5G832473 Zea mays GRMZM5G832473 N
GSMUA_Achr10G04720_001 Musa acuminata GSMUA_Achr10G04720_001 N
GSMUA_Achr6G19400_001 Musa acuminata GSMUA_Achr6G19400_001 N
GSMUA_Achr8G01410_001 Musa acuminata GSMUA_Achr8G01410_001 N
GSMUA_Achr9G29750_001 Musa acuminata GSMUA_Achr9G29750_001 N
LjSGA_014778.2 Lotus japonicus LjSGA_014778.2 N
LPERR01G32790 Leersia perrieri LPERR01G32790 N
Lus10004846.g Linum usitatissimum Lus10004846.g N
Lus10020643.g Linum usitatissimum Lus10020643.g N
Lus10029410.g Linum usitatissimum Lus10029410.g N
MDP0000130797 Malus domestica MDP0000130797 N
MDP0000205938 Malus domestica MDP0000205938 N
MDP0000252435 Malus domestica MDP0000252435 N
MDP0000759504 Malus domestica MDP0000759504 N
mgf020234m Mimulus guttatus mgf020234m N
mgf024293m Mimulus guttatus mgf024293m N
MTR_2g086690 Medicago truncatula MTR_2g086690 N
MTR_4g052620 Medicago truncatula MTR_4g052620 N
MTR_7g105170 Medicago truncatula MTR_7g105170 N
OB11G12830 Oryza brachyantha OB11G12830 N
OB12G13350 Oryza brachyantha OB12G13350 N
OBART01G38190 Oryza barthii OBART01G38190 N
OBART11G03530 Oryza barthii OBART11G03530 N
OBART12G03440 Oryza barthii OBART12G03440 N
OGLUM01G42380 Oryza glumaepatula OGLUM01G42380 N
OGLUM11G03170 Oryza glumaepatula OGLUM11G03170 N
OGLUM12G04110 Oryza glumaepatula OGLUM12G04110 N
OMERI01G35090 Oryza meridionalis OMERI01G35090 N
OMERI11G03230 Oryza meridionalis OMERI11G03230 N
ONIVA01G42870 Oryza nivara ONIVA01G42870 N
ONIVA11G03690 Oryza nivara ONIVA11G03690 N
ONIVA12G03060 Oryza nivara ONIVA12G03060 N
OPUNC01G36980 Oryza punctata OPUNC01G36980 N
OPUNC11G03220 Oryza punctata OPUNC11G03220 N
OPUNC12G03240 Oryza punctata OPUNC12G03240 N
orange1.1g023996m.g Citrus sinensis orange1.1g023996m.g N
orange1.1g039532m.g Citrus sinensis orange1.1g039532m.g N
ORGLA01G0320200 Oryza glaberrima ORGLA01G0320200 N
ORGLA11G0032800 Oryza glaberrima ORGLA11G0032800 N
ORGLA12G0033100 Oryza glaberrima ORGLA12G0033100 N
ORGLA12G0180300 Oryza glaberrima ORGLA12G0180300 N
ORUFI01G41540 Oryza rufipogon ORUFI01G41540 N
ORUFI11G03420 Oryza rufipogon ORUFI11G03420 N
OS01G0862800 Oryza sativa OS01G0862800 N
OS11G0154500 Oryza sativa OS11G0154500 N
OS12G0156100 Oryza sativa OS12G0156100 N
Pavir.Bb01366 Panicum virgatum Pavir.Bb01366 N
Pavir.Ea03745 Panicum virgatum Pavir.Ea03745 N
Pavir.Ha01768 Panicum virgatum Pavir.Ha01768 N
Pavir.Hb01808 Panicum virgatum Pavir.Hb01808 N
Pavir.J02276 Panicum virgatum Pavir.J02276 N
Pavir.J13106 Panicum virgatum Pavir.J13106 N
Pavir.J38855 Panicum virgatum Pavir.J38855 I
PGSC0003DMG400026332 Solanum tuberosum PGSC0003DMG400026332 N
PK27925.1 Cannabis sativa PK27925.1 N
Pm001403 Prunus mume Pm001403 N
Pm001404 Prunus mume Pm001404 N
POPTR_0001s22630 Populus trichocarpa POPTR_0001s22630 N
POPTR_0006s22580 Populus trichocarpa POPTR_0006s22580 N
POPTR_0009s02430 Populus trichocarpa POPTR_0009s02430 N
POPTR_0016s07690 Populus trichocarpa POPTR_0016s07690 N
PRUPE_ppa010337mg Prunus persica PRUPE_ppa010337mg N
PRUPE_ppa025103mg Prunus persica PRUPE_ppa025103mg N
SapurV1A.0450s0140 Salix purpurea SapurV1A.0450s0140 N
SapurV1A.0630s0010 Salix purpurea SapurV1A.0630s0010 N
SapurV1A.0974s0010 Salix purpurea SapurV1A.0974s0010 N
SapurV1A.1671s0050 Salix purpurea SapurV1A.1671s0050 N
SapurV1A.3648s0010 Salix purpurea SapurV1A.3648s0010 N
Sb05g003400 Sorghum bicolor Sb05g003400 N
Si002586m.g Setaria italica Si002586m.g N
Si025833m.g Setaria italica Si025833m.g N
Si026707m.g Setaria italica Si026707m.g N
Solyc09g010160.1 Solanum lycopersicum Solyc09g010160.1 N
Solyc11g068620.1 Solanum lycopersicum Solyc11g068620.1 N
TCM_022676 Theobroma cacao TCM_022676 N
TCM_022690 Theobroma cacao TCM_022690 N
TCM_041364 Theobroma cacao TCM_041364 N
TRAES3BF019300010CFD_g Triticum aestivum TRAES3BF019300010CFD_g N
TRIUR3_34272 Triticum urartu TRIUR3_34272 N
VIT_06s0080g00780 Vitis vinifera VIT_06s0080g00780 N
VIT_18s0041g00700 Vitis vinifera VIT_18s0041g00700 N