CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_3AL_86949050D
(
Triticum aestivum
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
Traes_3AL_86949050D
T180597_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_3AL_86949050D.1
FAR1
25
45
EFYNKYALEKGFSVRKSYVEW
Links
Other
FAR1
family TFs
Other
Triticum aestivum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29693.m002035
Ricinus communis
29693.m002035
N
0.000
AMTR_s00014p00061870
Amborella trichopoda
AMTR_s00014p00061870
N
0.000
Aquca_007_00897
Aquilegia coerulea
Aquca_007_00897
I
0.000
Aquca_022_00160
Aquilegia coerulea
Aquca_022_00160
N
0.000
AT2G34450
Arabidopsis thaliana
AT2G34450
N
0.000
BGIOSGA004165
Oryza indica
BGIOSGA004165
N
0.000
BGIOSGA004167
Oryza indica
BGIOSGA004167
N
0.000
Bo4g182600
Brassica oleracea
Bo4g182600
N
0.000
Bostr.18351s0219
Boechera stricta
Bostr.18351s0219
I
0.000
Bostr.23794s0665
Boechera stricta
Bostr.23794s0665
N
0.000
Bostr.7128s0663
Boechera stricta
Bostr.7128s0663
I
0.000
Bostr.7867s1415
Boechera stricta
Bostr.7867s1415
I
0.000
Bra021911
Brassica rapa
Bra021911
N
0.000
BRADI2G45927
Brachypodium distachyon
BRADI2G45927
I
0.000
Cagra.1891s0017
Capsella grandiflora
Cagra.1891s0017
I
0.000
Cagra.2350s0098
Capsella grandiflora
Cagra.2350s0098
I
0.000
Cagra.6160s0028
Capsella grandiflora
Cagra.6160s0028
I
0.000
Cagra.7352s0006
Capsella grandiflora
Cagra.7352s0006
N
0.000
Carubv10005973m.g
Capsella rubella
Carubv10005973m.g
I
0.000
Carubv10010586m.g
Capsella rubella
Carubv10010586m.g
I
0.000
Carubv10014808m.g
Capsella rubella
Carubv10014808m.g
I
0.000
Carubv10024236m.g
Capsella rubella
Carubv10024236m.g
N
0.000
cassava6449.valid.m1
Manihot esculenta
cassava6449.valid.m1
N
0.000
cassava7606.valid.m1
Manihot esculenta
cassava7606.valid.m1
N
0.000
Ca_05162
Cicer arietinum
Ca_05162
N
0.000
Ca_05164
Cicer arietinum
Ca_05164
N
0.000
Ciclev10017037m.g
Citrus clementina
Ciclev10017037m.g
N
0.000
Cucsa.047620
Cucumis sativus
Cucsa.047620
N
0.000
Eucgr.D00306
Eucalyptus grandis
Eucgr.D00306
N
0.000
F775_05073
Aegilops tauschii
F775_05073
I
0.000
fgenesh2_kg.4__1466__AT2G34450.2
Arabidopsis lyrata
fgenesh2_kg.4__1466__AT2G34450.2
N
0.000
gene20961-v1.0-hybrid
Fragaria vesca
gene20961-v1.0-hybrid
I
0.000
gene30574-v1.0-hybrid
Fragaria vesca
gene30574-v1.0-hybrid
N
0.000
GLYMA05G25900
Glycine max
GLYMA05G25900
N
0.000
GLYMA08G08840
Glycine max
GLYMA08G08840
N
0.000
Gorai.011G042300
Gossypium raimondii
Gorai.011G042300
N
0.000
GRMZM2G024247
Zea mays
GRMZM2G024247
N
0.000
GSMUA_Achr4G07950_001
Musa acuminata
GSMUA_Achr4G07950_001
N
0.000
GSMUA_Achr4G15000_001
Musa acuminata
GSMUA_Achr4G15000_001
N
0.000
gw1.32.10.1
Bigelowiella natans
gw1.32.10.1
N
0.000
HMG-1
Pisum sativum
Q41026_PEA
D
0.000
HMGB2
Arabidopsis lyrata
fgenesh2_kg.1__2255__AT1G20693.2
I
0.000
HMGB2
Arabidopsis thaliana
AT1G20693
I
0.000
HMGB4
Arabidopsis lyrata
fgenesh2_kg.3__3350__AT2G17560.1
I
0.000
HMGB4
Arabidopsis thaliana
AT2G17560
I
0.000
HMGB5
Arabidopsis lyrata
Al_scaffold_0007_498
I
0.000
HMGB5
Arabidopsis thaliana
AT4G35570
I
0.000
LjT35D08.150.nd
Lotus japonicus
LjT35D08.150.nd
I
0.000
LPERR01G21970
Leersia perrieri
LPERR01G21970
N
0.000
Lus10015268.g
Linum usitatissimum
Lus10015268.g
N
0.000
Lus10025391.g
Linum usitatissimum
Lus10025391.g
N
0.000
MDP0000143506
Malus domestica
MDP0000143506
N
0.000
MDP0000170945
Malus domestica
MDP0000170945
N
0.000
MDP0000695104
Malus domestica
MDP0000695104
N
0.000
mgf009922m
Mimulus guttatus
mgf009922m
N
0.000
MLOC_7069
Hordeum vulgare
MLOC_7069
N
0.000
MTR_3g115580
Medicago truncatula
MTR_3g115580
I
0.000
MTR_4g094622
Medicago truncatula
MTR_4g094622
N
0.000
MTR_7g068280
Medicago truncatula
MTR_7g068280
I
0.000
NCLIV_043670
Neospora caninum
NCLIV_043670
I
0.000
OB01G34910
Oryza brachyantha
OB01G34910
I
0.000
OBART01G25720
Oryza barthii
OBART01G25720
N
0.000
OGLUM01G29550
Oryza glumaepatula
OGLUM01G29550
N
0.000
OMERI01G23390
Oryza meridionalis
OMERI01G23390
N
0.000
orange1.1g031573m.g
Citrus sinensis
orange1.1g031573m.g
N
0.000
ORGLA01G0210300
Oryza glaberrima
ORGLA01G0210300
N
0.000
ORUFI01G28620
Oryza rufipogon
ORUFI01G28620
N
0.000
OS01G0666200
Oryza sativa
OS01G0666200
N
0.000
Pavir.J05892
Panicum virgatum
Pavir.J05892
N
0.000
PK22924.1
Cannabis sativa
PK22924.1
N
0.000
POPTR_0004s13630
Populus trichocarpa
POPTR_0004s13630
N
0.000
PRUPE_ppa013152mg
Prunus persica
PRUPE_ppa013152mg
N
0.000
SapurV1A.0560s0060
Salix purpurea
SapurV1A.0560s0060
N
0.000
Sb03g030540
Sorghum bicolor
Sb03g030540
N
0.000
Si003021m.g
Setaria italica
Si003021m.g
N
0.000
TCM_029514
Theobroma cacao
TCM_029514
N
0.000
TGME49_010410
Toxoplasma gondii
TGME49_010410
I
0.000
Thhalv10017360m.g
Eutrema salsugineum
Thhalv10017360m.g
N
0.000
TRAES3BF031900060CFD_g
Triticum aestivum
TRAES3BF031900060CFD_g
I
0.000