PRUPE_ppa013152mg (Prunus persica)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 PRUPE_ppa013152mg T332205_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EMJ15170 Sox 47 116

Links

Other Sox family TFs
Other Prunus persica TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000143506 Malus domestica MDP0000143506 N 0.698
29693.m002035 Ricinus communis 29693.m002035 N 0.688
Eucgr.D00306 Eucalyptus grandis Eucgr.D00306 N 0.683
MDP0000695104 Malus domestica MDP0000695104 N 0.683
TCM_029514 Theobroma cacao TCM_029514 N 0.680
Ciclev10017037m.g Citrus clementina Ciclev10017037m.g N 0.680
Gorai.011G042300 Gossypium raimondii Gorai.011G042300 N 0.680
orange1.1g031573m.g Citrus sinensis orange1.1g031573m.g N 0.680
AMTR_s00014p00061870 Amborella trichopoda AMTR_s00014p00061870 N 0.677
Bostr.23794s0665 Boechera stricta Bostr.23794s0665 N 0.675
Cagra.7352s0006 Capsella grandiflora Cagra.7352s0006 N 0.675
Carubv10024236m.g Capsella rubella Carubv10024236m.g N 0.675
GLYMA05G25900 Glycine max GLYMA05G25900 N 0.655
GLYMA08G08840 Glycine max GLYMA08G08840 N 0.655
cassava6449.valid.m1 Manihot esculenta cassava6449.valid.m1 N 0.649
Cucsa.047620 Cucumis sativus Cucsa.047620 N 0.648
F775_05073 Aegilops tauschii F775_05073 I 0.646
TRAES3BF031900060CFD_g Triticum aestivum TRAES3BF031900060CFD_g I 0.646
AT2G34450 Arabidopsis thaliana AT2G34450 N 0.641
Bo4g182600 Brassica oleracea Bo4g182600 N 0.641
Bra021911 Brassica rapa Bra021911 N 0.641
gene30574-v1.0-hybrid Fragaria vesca gene30574-v1.0-hybrid N 0.641
Pavir.J05892 Panicum virgatum Pavir.J05892 N 0.639
Ca_05162 Cicer arietinum Ca_05162 N 0.638
Ca_05164 Cicer arietinum Ca_05164 N 0.638
GSMUA_Achr4G07950_001 Musa acuminata GSMUA_Achr4G07950_001 N 0.637
cassava7606.valid.m1 Manihot esculenta cassava7606.valid.m1 N 0.637
MLOC_7069 Hordeum vulgare MLOC_7069 N 0.636
BRADI2G45927 Brachypodium distachyon BRADI2G45927 I 0.634
SapurV1A.0560s0060 Salix purpurea SapurV1A.0560s0060 N 0.634
PK22924.1 Cannabis sativa PK22924.1 N 0.629
GSMUA_Achr4G15000_001 Musa acuminata GSMUA_Achr4G15000_001 N 0.627
POPTR_0004s13630 Populus trichocarpa POPTR_0004s13630 N 0.624
MTR_4g094622 Medicago truncatula MTR_4g094622 N 0.623
Si003021m.g Setaria italica Si003021m.g N 0.614
Thhalv10017360m.g Eutrema salsugineum Thhalv10017360m.g N 0.614
mgf009922m Mimulus guttatus mgf009922m N 0.592
Aquca_022_00160 Aquilegia coerulea Aquca_022_00160 N 0.588
Lus10025391.g Linum usitatissimum Lus10025391.g N 0.583
Sb03g030540 Sorghum bicolor Sb03g030540 N 0.582
fgenesh2_kg.4__1466__AT2G34450.2 Arabidopsis lyrata fgenesh2_kg.4__1466__AT2G34450.2 N 0.579
GRMZM2G024247 Zea mays GRMZM2G024247 N 0.575
Lus10015268.g Linum usitatissimum Lus10015268.g N 0.571
MDP0000170945 Malus domestica MDP0000170945 N 0.543
OB01G34910 Oryza brachyantha OB01G34910 I 0.539
Pavir.Eb02691 Panicum virgatum Pavir.Eb02691 I 0.538
BGIOSGA004165 Oryza indica BGIOSGA004165 N 0.500
OBART01G25720 Oryza barthii OBART01G25720 N 0.500
OGLUM01G29550 Oryza glumaepatula OGLUM01G29550 N 0.500
OMERI01G23390 Oryza meridionalis OMERI01G23390 N 0.500
ORGLA01G0210300 Oryza glaberrima ORGLA01G0210300 N 0.500
ORUFI01G28620 Oryza rufipogon ORUFI01G28620 N 0.500
OS01G0666200 Oryza sativa OS01G0666200 N 0.500
MDP0000392251 Malus domestica MDP0000392251 N 0.499
BGIOSGA004167 Oryza indica BGIOSGA004167 N 0.498
LPERR01G21970 Leersia perrieri LPERR01G21970 N 0.479
cassava6450.valid.m1 Manihot esculenta cassava6450.valid.m1 N 0.443
chr5.CM0180.220.nd Lotus japonicus chr5.CM0180.220.nd I 0.434
GLYMA05G25892 Glycine max GLYMA05G25892 N 0.417