mgf009922m (Mimulus guttatus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 mgf009922m T334290_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mgf009922m Sox 57 126

Links

Other Sox family TFs
Other Mimulus guttatus TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g031573m.g Citrus sinensis orange1.1g031573m.g N 0.639
Ciclev10017037m.g Citrus clementina Ciclev10017037m.g N 0.639
TCM_029514 Theobroma cacao TCM_029514 N 0.639
29693.m002035 Ricinus communis 29693.m002035 N 0.639
Gorai.011G042300 Gossypium raimondii Gorai.011G042300 N 0.639
GLYMA08G08840 Glycine max GLYMA08G08840 N 0.637
GLYMA05G25900 Glycine max GLYMA05G25900 N 0.637
SapurV1A.0560s0060 Salix purpurea SapurV1A.0560s0060 N 0.631
POPTR_0004s13630 Populus trichocarpa POPTR_0004s13630 N 0.621
cassava7606.valid.m1 Manihot esculenta cassava7606.valid.m1 N 0.619
gene30574-v1.0-hybrid Fragaria vesca gene30574-v1.0-hybrid N 0.617
Eucgr.D00306 Eucalyptus grandis Eucgr.D00306 N 0.617
PK22924.1 Cannabis sativa PK22924.1 N 0.610
AMTR_s00014p00061870 Amborella trichopoda AMTR_s00014p00061870 N 0.610
MDP0000695104 Malus domestica MDP0000695104 N 0.606
cassava6449.valid.m1 Manihot esculenta cassava6449.valid.m1 N 0.600
MLOC_7069 Hordeum vulgare MLOC_7069 N 0.599
MDP0000143506 Malus domestica MDP0000143506 N 0.597
Cucsa.047620 Cucumis sativus Cucsa.047620 N 0.597
Lus10025391.g Linum usitatissimum Lus10025391.g N 0.595
GSMUA_Achr4G15000_001 Musa acuminata GSMUA_Achr4G15000_001 N 0.593
PRUPE_ppa013152mg Prunus persica PRUPE_ppa013152mg N 0.592
F775_05073 Aegilops tauschii F775_05073 I 0.588
TRAES3BF031900060CFD_g Triticum aestivum TRAES3BF031900060CFD_g I 0.588
Cagra.7352s0006 Capsella grandiflora Cagra.7352s0006 N 0.583
Carubv10024236m.g Capsella rubella Carubv10024236m.g N 0.583
Bostr.23794s0665 Boechera stricta Bostr.23794s0665 N 0.583
Lus10015268.g Linum usitatissimum Lus10015268.g N 0.582
GSMUA_Achr4G07950_001 Musa acuminata GSMUA_Achr4G07950_001 N 0.582
Ca_05162 Cicer arietinum Ca_05162 N 0.580
Ca_05164 Cicer arietinum Ca_05164 N 0.580
Pavir.J05892 Panicum virgatum Pavir.J05892 N 0.565
Aquca_022_00160 Aquilegia coerulea Aquca_022_00160 N 0.557
AT2G34450 Arabidopsis thaliana AT2G34450 N 0.555
Bo4g182600 Brassica oleracea Bo4g182600 N 0.555
Bra021911 Brassica rapa Bra021911 N 0.555
MTR_4g094622 Medicago truncatula MTR_4g094622 N 0.543
Si003021m.g Setaria italica Si003021m.g N 0.540
OBART01G25720 Oryza barthii OBART01G25720 N 0.539
BGIOSGA004165 Oryza indica BGIOSGA004165 N 0.539
OMERI01G23390 Oryza meridionalis OMERI01G23390 N 0.539
OGLUM01G29550 Oryza glumaepatula OGLUM01G29550 N 0.539
OS01G0666200 Oryza sativa OS01G0666200 N 0.539
ORGLA01G0210300 Oryza glaberrima ORGLA01G0210300 N 0.539
ORUFI01G28620 Oryza rufipogon ORUFI01G28620 N 0.539
BRADI2G45927 Brachypodium distachyon BRADI2G45927 I 0.538
BGIOSGA004167 Oryza indica BGIOSGA004167 N 0.536
Thhalv10017360m.g Eutrema salsugineum Thhalv10017360m.g N 0.528
GRMZM2G024247 Zea mays GRMZM2G024247 N 0.514
Sb03g030540 Sorghum bicolor Sb03g030540 N 0.508
MDP0000170945 Malus domestica MDP0000170945 N 0.500
fgenesh2_kg.4__1466__AT2G34450.2 Arabidopsis lyrata fgenesh2_kg.4__1466__AT2G34450.2 N 0.494
OB01G34910 Oryza brachyantha OB01G34910 I 0.487
Pavir.Eb02691 Panicum virgatum Pavir.Eb02691 I 0.464
MDP0000392251 Malus domestica MDP0000392251 N 0.463
LPERR01G21970 Leersia perrieri LPERR01G21970 N 0.443