LCUP017774 (Lucilia cuprina)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00250 (Forkhead) IPR001766 LCUP017774 T189551_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
croc
M03744_2.00 		Drosophila melanogaster
WRYGTMAACAH
DTGTTKACRYW		 SELEX
Nitta et al.(2015)
croc_1 		0.834 0.977
croc
M10571_2.00 		Drosophila melanogaster
HWNARTAAATAKNNNV
BNNNMTATTTAYYNWD		 Transfac
Matys et al.(2006)
I$CROC_01 		0.834 0.977
FOXC1
M00257_2.00 		Homo sapiens
NNNVHHAAYA
TRTTDDBNNN		 PBM
Barrera et al.(2016)
FOXC1_REF 		0.796 0.895
Foxc1
M01982_2.00 		Mus musculus
HNNRHMAAYA
TRTTKDYNND		 PBM
Weirauch et al.(2014)
pTH2673 		0.796 0.895
FOXC1
M03013_2.00 		Homo sapiens
AWRTAAAYAAAYA
TRTTTRTTTAYWT		 SELEX
Jolma et al.(2013)
FOXC1_1 		0.796 0.895
FOXC1
M03014_2.00 		Homo sapiens
NRWMAATATTKWYN
NRWMAATATTKWYN		 SELEX
Jolma et al.(2013)
FOXC1_2 		0.796 0.895
FOXC1
M03015_2.00 		Homo sapiens
WRWRTMAAYAW
WTRTTKAYWYW		 SELEX
Jolma et al.(2013)
FOXC1_3 		0.796 0.895
Foxc1
M03059_2.00 		Mus musculus
RTAAAYAAACA
TGTTTRTTTAY		 SELEX
Jolma et al.(2013)
Foxc1_1 		0.796 0.895
Foxc1
M03060_2.00 		Mus musculus
RTAAACA
TGTTTAY		 SELEX
Jolma et al.(2013)
Foxc1_2 		0.796 0.895
FOXC1
M09083_2.00 		Homo sapiens
SBWAWRTAAACADHN
NDHTGTTTAYWTWVS		 Misc
Kulakovskiy et al.(2013)
FOXC1_HUMAN.H11MO.0.C 		0.796 0.895
Foxc1
M09111_2.00 		Mus musculus
SBWAWRTAAACADHN
NDHTGTTTAYWTWVS		 Misc
Kulakovskiy et al.(2013)
FOXC1_MOUSE.H11MO.0.C 		0.796 0.895
FOXC1
M10525_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOXC1_Q4 		0.796 0.895
FOXC1
M10526_2.00 		Homo sapiens
TSTTTATTTACDBNVN
NBNVHGTAAATAAASA		 Transfac
Matys et al.(2006)
V$FREAC3_01 		0.796 0.895
FOXC1
M00253_2.00 		Homo sapiens
NNHATAAWHAN
NTDWTTATDNN		 PBM
Barrera et al.(2016)
FOXC1_F112S 		0.796 0.884
FOXC1
M00255_2.00 		Homo sapiens
NRTATATWHNNN
NNNDWATATAYN		 PBM
Barrera et al.(2016)
FOXC1_L130F 		0.796 0.884
FOXC1
M00256_2.00 		Homo sapiens
NNNNWWTYAMAWN
NWTKTRAWWNNNN		 PBM
Barrera et al.(2016)
FOXC1_P79L 		0.796 0.884
FOXC1
M00258_2.00 		Homo sapiens
NNNAMAAYANN
NNTRTTKTNNN		 PBM
Barrera et al.(2016)
FOXC1_S131L 		0.796 0.884
FOXC1
M00259_2.00 		Homo sapiens
RTAAACAW
WTGTTTAY		 PBM
Barrera et al.(2016)
FOXC1_S82T 		0.796 0.884
FOXC1
M00254_2.00 		Homo sapiens
RRTAAACANN
NNTGTTTAYY		 PBM
Barrera et al.(2016)
FOXC1_I126M 		0.772 0.884
Foxc2
M00796_2.00 		Mus musculus
HNNRHMAAYA
TRTTKDYNND		 PBM
Weirauch et al.(2013)
pTH3796 		0.764 0.872
FOXC2
M03036_2.00 		Homo sapiens
NRTMAATATTDWYN
NRWHAATATTKAYN		 SELEX
Jolma et al.(2013)
FOXC2_1 		0.764 0.872
FOXC2
M03037_2.00 		Homo sapiens
RTAAAYAAACA
TGTTTRTTTAY		 SELEX
Jolma et al.(2013)
FOXC2_2 		0.764 0.872
FOXC2
M03038_2.00 		Homo sapiens
WAHRTMAAYAWW
WWTRTTKAYDTW		 SELEX
Jolma et al.(2013)
FOXC2_3 		0.764 0.872
FOXC2
M04841_2.00 		Homo sapiens
NHVNRYMAACAH
DTGTTKRYNBDN		 SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_1 		0.764 0.872
FOXC2
M04842_2.00 		Homo sapiens
RHAMAYAAACAH
DTGTTTRTKTDY		 SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_2 		0.764 0.872
FOXC2
M10559_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FKHL14_Q2 		0.764 0.872
FOXC2
M04843_2.00 		Homo sapiens
NHNNRYMAACAN
NTGTTKRYNNDN		 SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_1 		0.764 0.872
FOXC2
M04844_2.00 		Homo sapiens
VHMMAYAAACAN
NTGTTTRTKKDB		 SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_2 		0.764 0.872
foxe3
M01228_2.00 		Xenopus tropicalis
WNNVHHMAYW
WRTKDDBNNW		 PBM
Lambert et al.(2019)
pTH9824 		0.712 0.698
Foxl1
M00164_2.00 		Mus musculus
NNNRTMAAYA
TRTTKAYNNN		 PBM
Badis et al.(2009)
Foxl1_2809 		0.706 0.756
FOXL1
M03034_2.00 		Homo sapiens
RTAAACA
TGTTTAY		 SELEX
Jolma et al.(2013)
FOXL1_1 		0.706 0.744
FOXL1
M03035_2.00 		Homo sapiens
NRTAAAYAAAYAN
NTRTTTRTTTAYN		 SELEX
Jolma et al.(2013)
FOXL1_2 		0.706 0.744
FOXL1
M10558_2.00 		Homo sapiens
DHNVHATAAAYAHNNN
NNNDTRTTTATDBNDH		 Transfac
Matys et al.(2006)
V$FREAC7_01 		0.706 0.744
fd64A
M06197_2.00 		Drosophila melanogaster
KVWAAACA
TGTTTWBM		 B1H
Zhu et al.(2011)
fd64A_SANGER_5_FBgn0004895 		0.701 0.663
FOXE1
M04845_2.00 		Homo sapiens
BVYTAWRYAAACADN
NHTGTTTRYWTARBV		 SELEX
Yin et al.(2017)
FOXE1_eDBD_HT-SELEX 		0.694 0.628
FOXE1
M04846_2.00 		Homo sapiens
BVYTAARYAAACAWH
DWTGTTTRYTTARBV		 SELEX
Yin et al.(2017)
FOXE1_eDBD_Methyl-HT-SELEX 		0.694 0.628
FOXL2
M04847_2.00 		Homo sapiens
NVBGHMAACAH
DTGTTKDCVBN		 SELEX
Yin et al.(2017)
FOXL2_FL_HT-SELEX 		0.679 0.663
Foxl2
M09112_2.00 		Mus musculus
DWDWRTAAACA
TGTTTAYWHWH		 Misc
Kulakovskiy et al.(2013)
FOXL2_MOUSE.H11MO.0.C 		0.679 0.663
FOXL2
M10560_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOXL2_Q2 		0.679 0.663
FOXL2
M10561_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOXL2_Q5 		0.679 0.663
FOXL2
M04848_2.00 		Homo sapiens
HVCGWMAACAH
DTGTTKWCGBD		 SELEX
Yin et al.(2017)
FOXL2_FL_Methyl-HT-SELEX 		0.679 0.663
FOXD3
M03044_2.00 		Homo sapiens
NRTMAAYRTTWDYN
NRHWAAYRTTKAYN		 SELEX
Jolma et al.(2013)
FOXD3_1 		0.678 0.674
FOXD3
M03045_2.00 		Homo sapiens
RTAAAYA
TRTTTAY		 SELEX
Jolma et al.(2013)
FOXD3_2 		0.678 0.674
FOXD3
M04855_2.00 		Homo sapiens
VHWRHRTAMACW
WGTKTAYDYWDB		 SELEX
Yin et al.(2017)
FOXD3_eDBD_HT-SELEX 		0.678 0.674
Foxd3
M09114_2.00 		Mus musculus
DVNWRDRNAAACAVN
NBTGTTTNYHYWNBH		 Misc
Kulakovskiy et al.(2013)
FOXD3_MOUSE.H11MO.0.C 		0.678 0.674
FOXD3
M10565_2.00 		Homo sapiens
RADHAAAYAWWH
DWWTRTTTDHTY		 Transfac
Matys et al.(2006)
V$FOXD3_01 		0.678 0.674
FOXD3
M10566_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HFH2_Q5 		0.678 0.674
FOXD3
M04856_2.00 		Homo sapiens
VYWRHRTAAACW
WGTTTAYDYWRB		 SELEX
Yin et al.(2017)
FOXD3_eDBD_Methyl-HT-SELEX 		0.678 0.674
let-381
M00664_2.00 		Caenorhabditis elegans
RTAAACAW
WTGTTTAY		 PBM
Narasimhan et al.(2015)
pTH9057 		0.672 0.547
fd59A
M03739_2.00 		Drosophila melanogaster
HWAWRTAAACAWW
WWTGTTTAYWTWD		 SELEX
Nitta et al.(2015)
fd59A_1 		0.670 0.663
fd59A
M03740_2.00 		Drosophila melanogaster
WWAVAATAACAHN
NDTGTTATTBTWW		 SELEX
Nitta et al.(2015)
fd59A_2 		0.670 0.663
fd59A
M03741_2.00 		Drosophila melanogaster
YWRWRTAAAYAHH
DDTRTTTAYWYWR		 SELEX
Nitta et al.(2015)
fd59A_3 		0.670 0.663
fd59A
M03742_2.00 		Drosophila melanogaster
MWACAAYAAYAHW
WDTRTTRTTGTWK		 SELEX
Nitta et al.(2015)
fd59A_4 		0.670 0.663
FOXI1
M03026_2.00 		Homo sapiens
GTAAACA
TGTTTAC		 SELEX
Jolma et al.(2013)
FOXI1_1 		0.668 0.651
FOXI1
M03027_2.00 		Homo sapiens
RTGTKTACGGTAAACAA
TTGTTTACCGTAMACAY		 SELEX
Jolma et al.(2013)
FOXI1_2 		0.668 0.651
FOXI1
M04827_2.00 		Homo sapiens
NNNNNRTMAACAN
NTGTTKAYNNNNN		 SELEX
Yin et al.(2017)
FOXI1_eDBD_HT-SELEX 		0.668 0.651
FOXI1
M04829_2.00 		Homo sapiens
AAYGTAAACAMW
WKTGTTTACRTT		 SELEX
Yin et al.(2017)
FOXI1_FL_HT-SELEX 		0.668 0.651
FOXI1
M09095_2.00 		Homo sapiens
RRCCAATCAVAD
HTBTGATTGGYY		 Misc
Kulakovskiy et al.(2013)
FOXI1_HUMAN.H11MO.0.B 		0.668 0.651
FOXI1
M10556_2.00 		Homo sapiens
HAWAYAAAYAHVH
DBDTRTTTRTWTD		 Transfac
Matys et al.(2006)
V$HFH3_01 		0.668 0.651
FOXI1
M04828_2.00 		Homo sapiens
NWWVHRTAAACAH
DTGTTTAYDBWWN		 SELEX
Yin et al.(2017)
FOXI1_eDBD_Methyl-HT-SELEX 		0.668 0.651
FOXI1
M04830_2.00 		Homo sapiens
AAYRTAAACAAW
WTTGTTTAYRTT		 SELEX
Yin et al.(2017)
FOXI1_FL_Methyl-HT-SELEX 		0.668 0.651
Foxi1
M09109_2.00 		Mus musculus
RRCCAATCAVAD
HTBTGATTGGYY		 Misc
Kulakovskiy et al.(2013)
FOXI1_MOUSE.H11MO.0.B 		0.668 0.640
slp2
M03738_2.00 		Drosophila melanogaster
NNTRTTTACAACAHN
NDTGTTGTAAAYANN		 SELEX
Nitta et al.(2015)
slp2_1 		0.664 0.698
slp2
M06196_2.00 		Drosophila melanogaster
RTAAACAV
BTGTTTAY		 B1H
Zhu et al.(2011)
slp2_SANGER_5_FBgn0004567 		0.664 0.698
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LCUP017774-PA Forkhead 71 160

Links

Other Forkhead family TFs
Other Lucilia cuprina TFs

827 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27805.m000021 Ricinus communis 27805.m000021 I
28118.m000034 Ricinus communis 28118.m000034 I
AC198403.3_FG001 Zea mays AC198403.3_FG001 I
AMTR_s00021p00223240 Amborella trichopoda AMTR_s00021p00223240 I
AMTR_s00099p00039760 Amborella trichopoda AMTR_s00099p00039760 I
BGIOSGA034227 Oryza indica BGIOSGA034227 I
Bo2g072910 Brassica oleracea Bo2g072910 I
Bo5g086680 Brassica oleracea Bo5g086680 I
Bo6g046850 Brassica oleracea Bo6g046850 I
Bo6g094210 Brassica oleracea Bo6g094210 I
Bo6g113020 Brassica oleracea Bo6g113020 I
Bo8g027240 Brassica oleracea Bo8g027240 I
Bostr.10273s0203 Boechera stricta Bostr.10273s0203 I
Bostr.3359s0006 Boechera stricta Bostr.3359s0006 I
Bra003924 Brassica rapa Bra003924 I
Bra007975 Brassica rapa Bra007975 I
Bra010210 Brassica rapa Bra010210 I
Bra016136 Brassica rapa Bra016136 I
Bra028009 Brassica rapa Bra028009 I
BRADI4G21265 Brachypodium distachyon BRADI4G21265 I
Cagra.2418s0001 Capsella grandiflora Cagra.2418s0001 I
Carubv10011715m.g Capsella rubella Carubv10011715m.g I
Carubv10012215m.g Capsella rubella Carubv10012215m.g I
Carubv10022349m.g Capsella rubella Carubv10022349m.g I
cassava43172.valid.m1 Manihot esculenta cassava43172.valid.m1 I
cassava45911.m1 Manihot esculenta cassava45911.m1 I
cassava8552.m1 Manihot esculenta cassava8552.m1 I
Ca_15064 Cicer arietinum Ca_15064 I
chr2.CM0018.470.nd Lotus japonicus chr2.CM0018.470.nd I
chr2.CM0018.610.nd Lotus japonicus chr2.CM0018.610.nd I
Ciclev10023857m.g Citrus clementina Ciclev10023857m.g I
Ciclev10024063m.g Citrus clementina Ciclev10024063m.g I
Cla012661 Citrullus lanatus Cla012661 I
Cla012665 Citrullus lanatus Cla012665 I
Cucsa.237150 Cucumis sativus Cucsa.237150 I
Cucsa.237170 Cucumis sativus Cucsa.237170 I
ERF021 Arabidopsis thaliana AT1G71450 D
ERF022 Arabidopsis thaliana AT1G33760 I
Eucgr.F02974 Eucalyptus grandis Eucgr.F02974 I
Eucgr.F02976 Eucalyptus grandis Eucgr.F02976 I
evm.TU.supercontig_21.69 Carica papaya evm.TU.supercontig_21.69 I
evm.TU.supercontig_21.70 Carica papaya evm.TU.supercontig_21.70 I
F775_17299 Aegilops tauschii F775_17299 I
fgenesh2_kg.2__1406__AT1G71450.1 Arabidopsis lyrata fgenesh2_kg.2__1406__AT1G71450.1 I
gene27017-v1.0-hybrid Fragaria vesca gene27017-v1.0-hybrid I
gene27021-v1.0-hybrid Fragaria vesca gene27021-v1.0-hybrid I
GLYMA01G44130 Glycine max GLYMA01G44130 I
GLYMA01G44140 Glycine max GLYMA01G44140 I
GLYMA11G01640 Glycine max GLYMA11G01640 I
Gorai.005G116500 Gossypium raimondii Gorai.005G116500 I
Gorai.009G266600 Gossypium raimondii Gorai.009G266600 I
Gorai.009G266700 Gossypium raimondii Gorai.009G266700 I
GSMUA_Achr11G12650_001 Musa acuminata GSMUA_Achr11G12650_001 N
GSMUA_Achr2G20760_001 Musa acuminata GSMUA_Achr2G20760_001 I
GSMUA_Achr8G16250_001 Musa acuminata GSMUA_Achr8G16250_001 I
LPERR11G07100 Leersia perrieri LPERR11G07100 I
Lus10002953.g Linum usitatissimum Lus10002953.g I
Lus10006173.g Linum usitatissimum Lus10006173.g I
Lus10041050.g Linum usitatissimum Lus10041050.g I
Lus10041052.g Linum usitatissimum Lus10041052.g N
MDP0000122739 Malus domestica MDP0000122739 I
MDP0000122740 Malus domestica MDP0000122740 I
MDP0000151428 Malus domestica MDP0000151428 I
MDP0000283350 Malus domestica MDP0000283350 I
MLOC_55144 Hordeum vulgare MLOC_55144 I
MTR_5g008550 Medicago truncatula MTR_5g008550 I
MTR_5g008590 Medicago truncatula MTR_5g008590 I
OB11G16300 Oryza brachyantha OB11G16300 I
OGLUM11G07800 Oryza glumaepatula OGLUM11G07800 I
OMERI11G06840 Oryza meridionalis OMERI11G06840 I
ONIVA11G08160 Oryza nivara ONIVA11G08160 I
OPUNC11G07750 Oryza punctata OPUNC11G07750 I
orange1.1g035756m.g Citrus sinensis orange1.1g035756m.g I
orange1.1g046901m.g Citrus sinensis orange1.1g046901m.g I
ORGLA11G0070000 Oryza glaberrima ORGLA11G0070000 I
ORUFI11G08240 Oryza rufipogon ORUFI11G08240 I
OS11G0242300 Oryza sativa OS11G0242300 I
Pavir.J22217 Panicum virgatum Pavir.J22217 I
Pavir.J26137 Panicum virgatum Pavir.J26137 I
PGSC0003DMG400017813 Solanum tuberosum PGSC0003DMG400017813 I
PGSC0003DMG400018054 Solanum tuberosum PGSC0003DMG400018054 I
Pm004269 Prunus mume Pm004269 I
Pm004272 Prunus mume Pm004272 I
POPTR_0001s18180 Populus trichocarpa POPTR_0001s18180 I
POPTR_0003s05300 Populus trichocarpa POPTR_0003s05300 I
POPTR_0013s10330 Populus trichocarpa POPTR_0013s10330 I
POPTR_0013s10340 Populus trichocarpa POPTR_0013s10340 I
POPTR_0019s10420 Populus trichocarpa POPTR_0019s10420 I
POPTR_0019s10430 Populus trichocarpa POPTR_0019s10430 I
PRUPE_ppa012354mg Prunus persica PRUPE_ppa012354mg I
PRUPE_ppa018178mg Prunus persica PRUPE_ppa018178mg I
SapurV1A.0551s0030 Salix purpurea SapurV1A.0551s0030 I
SapurV1A.0551s0040 Salix purpurea SapurV1A.0551s0040 I
SapurV1A.0601s0170 Salix purpurea SapurV1A.0601s0170 N
SapurV1A.1130s0090 Salix purpurea SapurV1A.1130s0090 I
SapurV1A.1130s0100 Salix purpurea SapurV1A.1130s0100 I
SapurV1A.1331s0040 Salix purpurea SapurV1A.1331s0040 I
SapurV1A.1331s0050 Salix purpurea SapurV1A.1331s0050 I
SapurV1A.3106s0010 Salix purpurea SapurV1A.3106s0010 I
Sb05g007135 Sorghum bicolor Sb05g007135 I
scaffold_103754.1 Arabidopsis lyrata scaffold_103754.1 I
Si026882m.g Setaria italica Si026882m.g I
Solyc11g042560.1 Solanum lycopersicum Solyc11g042560.1 I
Solyc11g042580.1 Solanum lycopersicum Solyc11g042580.1 I
TCM_036269 Theobroma cacao TCM_036269 I
TCM_036270 Theobroma cacao TCM_036270 I
Thhalv10010002m.g Eutrema salsugineum Thhalv10010002m.g I
Thhalv10019659m.g Eutrema salsugineum Thhalv10019659m.g I
Traes_4AL_D2D7703821 Triticum aestivum Traes_4AL_D2D7703821 I
Traes_4BS_DD5E68382 Triticum aestivum Traes_4BS_DD5E68382 I
Traes_4DS_97AC77E13 Triticum aestivum Traes_4DS_97AC77E13 I
TRIUR3_32331 Triticum urartu TRIUR3_32331 I
VIT_15s0046g00310 Vitis vinifera VIT_15s0046g00310 I
VIT_18s0001g05850 Vitis vinifera VIT_18s0001g05850 I
VIT_18s0001g05890 Vitis vinifera VIT_18s0001g05890 I