CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AAEL006114
(
Aedes aegypti
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
AAEL006114
T191599_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GATAe
M03761_2.00
Drosophila melanogaster
VHGATAAS
STTATCDB
SELEX
Nitta et al.(2015)
GATAe_1
0.851
0.800
GATAe
M03762_2.00
Drosophila melanogaster
HGATAACNNNGTTATCD
HGATAACNNNGTTATCD
SELEX
Nitta et al.(2015)
GATAe_2
0.851
0.800
GATAe
M03763_2.00
Drosophila melanogaster
HGATAAGNNNCTTATCD
HGATAAGNNNCTTATCD
SELEX
Nitta et al.(2015)
GATAe_3
0.851
0.800
GATAe
M06208_2.00
Drosophila melanogaster
WGATAAG
CTTATCW
B1H
Zhu et al.(2011)
GATAe_SANGER_5_FBgn0038391
0.851
0.800
nit-2
M02017_2.00
Neurospora crassa
NNGATHNN
NNDATCNN
PBM
Weirauch et al.(2014)
pTH8624
0.822
0.657
nit-2
M10601_2.00
Neurospora crassa
DHGATA
TATCDH
Transfac
Matys et al.(2006)
F$NIT2_01
0.822
0.657
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAEL006114-PA
GATA
13
47
CANCKTTTTTLWRRNQGGEPVCNACGLYYKLHNVN
Links
Other
GATA
family TFs
Other
Aedes aegypti
TFs
438 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AC234185.1_FG006
Zea mays
AC234185.1_FG006
I
0.000
BGIOSGA022830
Oryza indica
BGIOSGA022830
N
0.000
F775_04223
Aegilops tauschii
F775_04223
I
0.000
F775_43210
Aegilops tauschii
F775_43210
I
0.000
GRMZM2G459864
Zea mays
GRMZM2G459864
N
0.000
GRMZM5G891280
Zea mays
GRMZM5G891280
I
0.000
GSMUA_Achr5G26530_001
Musa acuminata
GSMUA_Achr5G26530_001
I
0.000
LPERR06G13350
Leersia perrieri
LPERR06G13350
N
0.000
LPERR11G15320
Leersia perrieri
LPERR11G15320
N
0.000
OB06G21580
Oryza brachyantha
OB06G21580
N
0.000
OBART02G04930
Oryza barthii
OBART02G04930
N
0.000
OBART06G13310
Oryza barthii
OBART06G13310
N
0.000
OGLUM06G14250
Oryza glumaepatula
OGLUM06G14250
N
0.000
OLONG_015132
Oryza longistaminata
OLONG_015132
N
0.000
ONIVA06G15960
Oryza nivara
ONIVA06G15960
N
0.000
OPUNC09G00580
Oryza punctata
OPUNC09G00580
N
0.000
ORGLA06G0273400
Oryza glaberrima
ORGLA06G0273400
N
0.000
ORUFI06G14240
Oryza rufipogon
ORUFI06G14240
N
0.000
Pavir.Ba03370
Panicum virgatum
Pavir.Ba03370
N
0.000
Pavir.Bb00804
Panicum virgatum
Pavir.Bb00804
N
0.000
Pavir.J00788
Panicum virgatum
Pavir.J00788
I
0.000
Pavir.J11717
Panicum virgatum
Pavir.J11717
I
0.000
Sb06g015640
Sorghum bicolor
Sb06g015640
N
0.000
Sb07g007306
Sorghum bicolor
Sb07g007306
N
0.000
Sb07g007373
Sorghum bicolor
Sb07g007373
N
0.000
Sb0836s002010
Sorghum bicolor
Sb0836s002010
N
0.000
Sb09g029120
Sorghum bicolor
Sb09g029120
I
0.000
Si019951m.g
Setaria italica
Si019951m.g
I
0.000
TRAES3BF106100060CFD_g
Triticum aestivum
TRAES3BF106100060CFD_g
I
0.000
Traes_6DL_609A01BD5
Triticum aestivum
Traes_6DL_609A01BD5
I
0.000