GRMZM2G123909 (Zea mays)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 GRMZM2G123909 T193563_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.853 0.972
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.853 0.972
GATA20
M06884_2.00 		Arabidopsis thaliana
GATCBGAT
ATCVGATC		 Dap-seq
OMalley et al.(2016)
GATA20_col_a 		0.812 0.917
GATA20
M06885_2.00 		Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND		 Dap-seq
OMalley et al.(2016)
GATA20_colamp_a 		0.812 0.917
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G123909_P01 GATA 110 145

Links

Other GATA family TFs
Other Zea mays TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29983.m003255 Ricinus communis 29983.m003255 N 0.000
Aquca_008_00040 Aquilegia coerulea Aquca_008_00040 N 0.000
Aquca_102_00032 Aquilegia coerulea Aquca_102_00032 N 0.000
BGIOSGA000702 Oryza indica BGIOSGA000702 N 0.000
BRADI2G51790 Brachypodium distachyon BRADI2G51790 N 0.000
Cla007849 Citrullus lanatus Cla007849 N 0.000
Cucsa.147930 Cucumis sativus Cucsa.147930 N 0.000
Eucgr.K00939 Eucalyptus grandis Eucgr.K00939 N 0.000
Gorai.005G204800 Gossypium raimondii Gorai.005G204800 N 0.000
GRMZM2G004690 Zea mays GRMZM2G004690 N 0.000
GRMZM2G082745 Zea mays GRMZM2G082745 N 0.000
GSMUA_Achr1G08820_001 Musa acuminata GSMUA_Achr1G08820_001 N 0.000
GSMUA_Achr2G02900_001 Musa acuminata GSMUA_Achr2G02900_001 N 0.000
GSMUA_AchrUn_randomG13850_001 Musa acuminata GSMUA_AchrUn_randomG13850_001 N 0.000
LPERR01G28620 Leersia perrieri LPERR01G28620 N 0.000
LPERR05G17860 Leersia perrieri LPERR05G17860 N 0.000
Lus10018560.g Linum usitatissimum Lus10018560.g N 0.000
Lus10039791.g Linum usitatissimum Lus10039791.g N 0.000
MDP0000089136 Malus domestica MDP0000089136 N 0.000
MLOC_64866 Hordeum vulgare MLOC_64866 N 0.000
OB01G42000 Oryza brachyantha OB01G42000 N 0.000
OB05G29560 Oryza brachyantha OB05G29560 N 0.000
OGLUM01G37340 Oryza glumaepatula OGLUM01G37340 N 0.000
OLONG_014986 Oryza longistaminata OLONG_014986 N 0.000
OMERI01G30050 Oryza meridionalis OMERI01G30050 N 0.000
ONIVA01G37460 Oryza nivara ONIVA01G37460 N 0.000
OPUNC01G32160 Oryza punctata OPUNC01G32160 N 0.000
ORGLA01G0271200 Oryza glaberrima ORGLA01G0271200 N 0.000
ORUFI01G36290 Oryza rufipogon ORUFI01G36290 N 0.000
OS01G0780800 Oryza sativa OS01G0780800 N 0.000
Pavir.Eb03405 Panicum virgatum Pavir.Eb03405 N 0.000
SapurV1A.0492s0170 Salix purpurea SapurV1A.0492s0170 N 0.000
Sb03g036430 Sorghum bicolor Sb03g036430 N 0.000
Si002762m.g Setaria italica Si002762m.g N 0.000