GSMUA_Achr3G05620_001 (Musa acuminata)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 GSMUA_Achr3G05620_001 T193599_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS06G0698900
M02015_2.00 		Oryza sativa
NNNNAHBNN
NNVDTNNNN		 PBM
Weirauch et al.(2014)
pTH8641 		0.867 0.944
GATA24
M01941_2.00 		Arabidopsis thaliana
HGATBNN
NNVATCD		 PBM
Weirauch et al.(2014)
pTH7661 		0.857 0.889
GATA28
M01996_2.00 		Arabidopsis thaliana
NNGATNN
NNATCNN		 PBM
Weirauch et al.(2014)
pTH7505 		0.851 0.833
GATA28
M06883_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATG
CATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
ZML2_col_a 		0.851 0.833
ZIM
M06892_2.00 		Arabidopsis thaliana
AWYSRACGGYYVWGA
TCWBRRCCGTYSRWT		 Dap-seq
OMalley et al.(2016)
ZIM_col_a 		0.810 0.861
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr3P05620_001 GATA 166 203

Links

Other GATA family TFs
Other Musa acuminata TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT5G01200 Arabidopsis thaliana AT5G01200 N
AT5G58900 Arabidopsis thaliana AT5G58900 D
Bo3g018460 Brassica oleracea Bo3g018460 I
Bostr.26833s0356 Boechera stricta Bostr.26833s0356 I
Bostr.6251s0088 Boechera stricta Bostr.6251s0088 I
Bra002610 Brassica rapa Bra002610 I
Bra006741 Brassica rapa Bra006741 I
Bra028892 Brassica rapa Bra028892 I
Cagra.0891s0087 Capsella grandiflora Cagra.0891s0087 I
Cagra.7888s0001 Capsella grandiflora Cagra.7888s0001 N
Carubv10001741m.g Capsella rubella Carubv10001741m.g N
Carubv10026903m.g Capsella rubella Carubv10026903m.g I
fgenesh1_pg.C_scaffold_6000079 Arabidopsis lyrata fgenesh1_pg.C_scaffold_6000079 N
fgenesh2_kg.8__1829__AT5G58900.1 Arabidopsis lyrata fgenesh2_kg.8__1829__AT5G58900.1 I
Lus10009884.g Linum usitatissimum Lus10009884.g I
Lus10028264.g Linum usitatissimum Lus10028264.g I
SapurV1A.0041s0720 Salix purpurea SapurV1A.0041s0720 I
SapurV1A.0164s0380 Salix purpurea SapurV1A.0164s0380 I
Thhalv10014270m.g Eutrema salsugineum Thhalv10014270m.g I
Thhalv10014410m.g Eutrema salsugineum Thhalv10014410m.g I