Ca_02992 (Cicer arietinum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Ca_02992 T195841_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA16
M06897_2.00 		Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT		 Dap-seq
OMalley et al.(2016)
GATA16_col_a 		0.841 0.889
GATA15
M01997_2.00 		Arabidopsis thaliana
NNHGATCNN
NNGATCDNN		 PBM
Weirauch et al.(2014)
pTH7662 		0.821 0.889
GATA15
M06886_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATS
SATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
GATA15_col_b 		0.821 0.889
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_02992 GATA 36 71

Links

Other GATA family TFs
Other Cicer arietinum TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28405.m000015 Ricinus communis 28405.m000015 N
30170.m014085 Ricinus communis 30170.m014085 N
Al_scaffold_0006_3588 Arabidopsis lyrata Al_scaffold_0006_3588 N
Aquca_010_00556 Aquilegia coerulea Aquca_010_00556 N
AT4G05170 Arabidopsis thaliana AT4G05170 N
BHLH110 Arabidopsis thaliana AT1G27660 N
BHLH154 Arabidopsis thaliana AT2G31730 N
Bo3g026410 Brassica oleracea Bo3g026410 N
Bo4g049510 Brassica oleracea Bo4g049510 N
Bo9g076250 Brassica oleracea Bo9g076250 N
Bostr.26675s0184 Boechera stricta Bostr.26675s0184 N
Bostr.2983s0058 Boechera stricta Bostr.2983s0058 N
Bra029562 Brassica rapa Bra029562 N
Cagra.1981s0012 Capsella grandiflora Cagra.1981s0012 N
Carubv10003683m.g Capsella rubella Carubv10003683m.g N
cassava21180.m1 Manihot esculenta cassava21180.m1 N
cassava36740.valid.m1 Manihot esculenta cassava36740.valid.m1 N
cassava37772.valid.m1 Manihot esculenta cassava37772.valid.m1 N
cassava37773.valid.m1 Manihot esculenta cassava37773.valid.m1 N
cassava42530.valid.m1 Manihot esculenta cassava42530.valid.m1 N
Ca_04928 Cicer arietinum Ca_04928 N
chr5.CM0200.1030.nc Lotus japonicus chr5.CM0200.1030.nc N
Ciclev10001291m.g Citrus clementina Ciclev10001291m.g N
Cla011068 Citrullus lanatus Cla011068 N
Cla021101 Citrullus lanatus Cla021101 N
Cucsa.095280 Cucumis sativus Cucsa.095280 N
Cucsa.342640 Cucumis sativus Cucsa.342640 N
Cucsa.359290 Cucumis sativus Cucsa.359290 N
Eucgr.D00881 Eucalyptus grandis Eucgr.D00881 N
evm.TU.supercontig_99.32 Carica papaya evm.TU.supercontig_99.32 N
fgenesh2_kg.1__2924__AT1G27660.1 Arabidopsis lyrata fgenesh2_kg.1__2924__AT1G27660.1 N
gene11847-v1.0-hybrid Fragaria vesca gene11847-v1.0-hybrid N
Gorai.009G199600 Gossypium raimondii Gorai.009G199600 N
Gorai.011G135700 Gossypium raimondii Gorai.011G135700 N
GSMUA_Achr6G24280_001 Musa acuminata GSMUA_Achr6G24280_001 N
LjSGA_021413.2 Lotus japonicus LjSGA_021413.2 N
MDP0000168695 Malus domestica MDP0000168695 N
MDP0000262020 Malus domestica MDP0000262020 N
MDP0000687814 Malus domestica MDP0000687814 N
mgf013138m Mimulus guttatus mgf013138m N
MLOC_57076 Hordeum vulgare MLOC_57076 N
MTR_3g112170 Medicago truncatula MTR_3g112170 N
OLONG_021979 Oryza longistaminata OLONG_021979 N
OPUNC01G00360 Oryza punctata OPUNC01G00360 N
orange1.1g035657m.g Citrus sinensis orange1.1g035657m.g N
PDK_20s1709901g001 Phoenix dactylifera PDK_20s1709901g001 N
PGSC0003DMG400003746 Solanum tuberosum PGSC0003DMG400003746 N
Pm005865 Prunus mume Pm005865 N
Pm007388 Prunus mume Pm007388 N
POPTR_0002s03380 Populus trichocarpa POPTR_0002s03380 N
POPTR_0005s25240 Populus trichocarpa POPTR_0005s25240 N
POPTR_0013s13050 Populus trichocarpa POPTR_0013s13050 N
POPTR_0019s12530 Populus trichocarpa POPTR_0019s12530 N
PRUPE_ppa005486mg Prunus persica PRUPE_ppa005486mg N
PRUPE_ppa012528mg Prunus persica PRUPE_ppa012528mg N
SapurV1A.0006s0290 Salix purpurea SapurV1A.0006s0290 N
SapurV1A.0188s0290 Salix purpurea SapurV1A.0188s0290 N
SapurV1A.0388s0180 Salix purpurea SapurV1A.0388s0180 N
Sb03g008830 Sorghum bicolor Sb03g008830 N
Solyc02g084880.2 Solanum lycopersicum Solyc02g084880.2 N
Solyc04g080710.2 Solanum lycopersicum Solyc04g080710.2 N
TCM_019871 Theobroma cacao TCM_019871 N
TCM_034098 Theobroma cacao TCM_034098 N
Thhalv10017421m.g Eutrema salsugineum Thhalv10017421m.g N
Thhalv10029319m.g Eutrema salsugineum Thhalv10029319m.g N
VIT_05s0094g00480 Vitis vinifera VIT_05s0094g00480 N
VIT_18s0001g12970 Vitis vinifera VIT_18s0001g12970 N