fgeneshPB_pg.11__286 (Phycomyces blakesleeanus)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 fgeneshPB_pg.11__286 T196267_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
wc-2
M02016_2.00 		Neurospora crassa
NNHGATNNN
NNNATCDNN		 PBM
Weirauch et al.(2014)
pTH8611 		0.850 0.861
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgeneshPB_pg.11__286 GATA 335 370

Links

Other GATA family TFs
Other Phycomyces blakesleeanus TFs

148 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA004179 Oryza indica BGIOSGA004179 I 0.000
BGIOSGA019617 Oryza indica BGIOSGA019617 N 0.000
Bo9g006410 Brassica oleracea Bo9g006410 N 0.000
cassava31027.valid.m1 Manihot esculenta cassava31027.valid.m1 N 0.000
gene14635-v1.0-hybrid Fragaria vesca gene14635-v1.0-hybrid N 0.000
GLYMA08G38930 Glycine max GLYMA08G38930 N 0.000
Gorai.004G014700 Gossypium raimondii Gorai.004G014700 I 0.000
Gorai.013G254100 Gossypium raimondii Gorai.013G254100 I 0.000
GSMUA_Achr8G27210_001 Musa acuminata GSMUA_Achr8G27210_001 N 0.000
GSMUA_Achr9G06610_001 Musa acuminata GSMUA_Achr9G06610_001 N 0.000
LjSGA_012738.1 Lotus japonicus LjSGA_012738.1 N 0.000
LPERR01G22320 Leersia perrieri LPERR01G22320 I 0.000
OBART01G26120 Oryza barthii OBART01G26120 N 0.000
OBART05G11630 Oryza barthii OBART05G11630 N 0.000
OGLUM01G29920 Oryza glumaepatula OGLUM01G29920 I 0.000
OLONG_014924 Oryza longistaminata OLONG_014924 N 0.000
OMERI01G23740 Oryza meridionalis OMERI01G23740 I 0.000
ONIVA01G29520 Oryza nivara ONIVA01G29520 I 0.000
ONIVA05G12010 Oryza nivara ONIVA05G12010 N 0.000
OPUNC01G25990 Oryza punctata OPUNC01G25990 I 0.000
ORUFI01G29060 Oryza rufipogon ORUFI01G29060 I 0.000
ORUFI05G12600 Oryza rufipogon ORUFI05G12600 N 0.000
OS01G0672201 Oryza sativa OS01G0672201 I 0.000
PGSC0003DMG400004714 Solanum tuberosum PGSC0003DMG400004714 I 0.000
Pm012761 Prunus mume Pm012761 N 0.000
POPTR_0004s04840 Populus trichocarpa POPTR_0004s04840 N 0.000
SapurV1A.0042s0570 Salix purpurea SapurV1A.0042s0570 I 0.000
scaffold_603934.1 Arabidopsis lyrata scaffold_603934.1 N 0.000
TCM_008214 Theobroma cacao TCM_008214 I 0.000