CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.19424s0023
(
Boechera stricta
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Bostr.19424s0023
T202277_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.19424s0023.1.p
GRAS
60
423
LKWVLVACAKAVSENNLLMARWCMGELRGMVSISGVPIQRLGAYMLEGLVARLAASGSSIYKSLQSREPESYEFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGSQWIALIQAFAARPGGAPNIRITGIGDGSVLGTVKKRLEKLAKKFDVPFKFNAVSRPSCEVEAENLDVQEGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSPKVVTLVEQECNTNTSPFLPRFLETLSYYTAMFESIDVMLPRDHKERINIEQHCLARDVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYGIEERDGALYLGWMDRILVSSCAWK
Links
Other
GRAS
family TFs
Other
Boechera stricta
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29780.m001393
Ricinus communis
29780.m001393
N
cassava18077.valid.m1
Manihot esculenta
cassava18077.valid.m1
N
cassava18078.valid.m1
Manihot esculenta
cassava18078.valid.m1
N
cassava39873.m1
Manihot esculenta
cassava39873.m1
N
chr4.CM0387.290.nc
Lotus japonicus
chr4.CM0387.290.nc
N
Ciclev10015354m.g
Citrus clementina
Ciclev10015354m.g
N
Cucsa.026600
Cucumis sativus
Cucsa.026600
N
Eucgr.G02067
Eucalyptus grandis
Eucgr.G02067
N
evm.TU.supercontig_2.121
Carica papaya
evm.TU.supercontig_2.121
N
gene00620-v1.0-hybrid
Fragaria vesca
gene00620-v1.0-hybrid
N
GLYMA05G26790
Glycine max
GLYMA05G26790
N
GLYMA08G09780
Glycine max
GLYMA08G09780
N
Gorai.002G171200
Gossypium raimondii
Gorai.002G171200
N
Gorai.012G183100
Gossypium raimondii
Gorai.012G183100
N
MDP0000320521
Malus domestica
MDP0000320521
N
MDP0000826219
Malus domestica
MDP0000826219
N
orange1.1g022806m.g
Citrus sinensis
orange1.1g022806m.g
N
PK28293.1
Cannabis sativa
PK28293.1
N
Pm005924
Prunus mume
Pm005924
N
POPTR_0008s13960
Populus trichocarpa
POPTR_0008s13960
N
POPTR_0010s11180
Populus trichocarpa
POPTR_0010s11180
N
PRUPE_ppa009765mg
Prunus persica
PRUPE_ppa009765mg
N
SapurV1A.0015s0840
Salix purpurea
SapurV1A.0015s0840
N
SapurV1A.0055s0040
Salix purpurea
SapurV1A.0055s0040
N
TCM_011212
Theobroma cacao
TCM_011212
N