CBG26065 (Caenorhabditis briggsae)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 CBG26065 T205604_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Pbx1
M09213_2.00 		Mus musculus
TGABTGRCRGV
BCYGYCAVTCA		 Misc
Kulakovskiy et al.(2013)
PBX1_MOUSE.H11MO.0.A 		0.613 0.319
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG26065 Homeodomain 92 138

Links

Other Homeodomain family TFs
Other Caenorhabditis briggsae TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N
chr2.CM0250.170.nc Lotus japonicus chr2.CM0250.170.nc N
evm.TU.contig_26687.1 Carica papaya evm.TU.contig_26687.1 N
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N
evm.TU.contig_27553.5 Carica papaya evm.TU.contig_27553.5 N
evm.TU.contig_30005.1 Carica papaya evm.TU.contig_30005.1 N
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N
evm.TU.contig_31285.2 Carica papaya evm.TU.contig_31285.2 N
evm.TU.contig_31965.2 Carica papaya evm.TU.contig_31965.2 N
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N
evm.TU.contig_34259 Carica papaya evm.TU.contig_34259 N
evm.TU.contig_34792.1 Carica papaya evm.TU.contig_34792.1 N
evm.TU.contig_35176.1 Carica papaya evm.TU.contig_35176.1 N
evm.TU.contig_37047 Carica papaya evm.TU.contig_37047 N
evm.TU.contig_38122.1 Carica papaya evm.TU.contig_38122.1 N
evm.TU.contig_38329 Carica papaya evm.TU.contig_38329 N
evm.TU.contig_41894.2 Carica papaya evm.TU.contig_41894.2 N
evm.TU.contig_43014 Carica papaya evm.TU.contig_43014 N
evm.TU.contig_47064.2 Carica papaya evm.TU.contig_47064.2 N
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N
evm.TU.supercontig_2423.2 Carica papaya evm.TU.supercontig_2423.2 N
evm.TU.supercontig_347.13 Carica papaya evm.TU.supercontig_347.13 N
evm.TU.supercontig_347.4 Carica papaya evm.TU.supercontig_347.4 N
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N
evm.TU.supercontig_439.3 Carica papaya evm.TU.supercontig_439.3 N
evm.TU.supercontig_625.2 Carica papaya evm.TU.supercontig_625.2 N
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N
POPTR_0007s03410 Populus trichocarpa POPTR_0007s03410 N
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N