CGI_10016653 (Crassostrea gigas)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 CGI_10016653 T205850_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HESX1
M03187_2.00 		Homo sapiens
NHTAATTRVH
DBYAATTADN		 SELEX
Jolma et al.(2013)
HESX1_1 		0.680 0.230
HESX1
M03188_2.00 		Homo sapiens
NTAATTRGYAATTAD
HTAATTRCYAATTAN		 SELEX
Jolma et al.(2013)
HESX1_2 		0.680 0.230
HESX1
M05227_2.00 		Homo sapiens
DYAATTRV
BYAATTRH		 SELEX
Yin et al.(2017)
HESX1_FL_HT-SELEX 		0.680 0.230
HESX1
M05228_2.00 		Homo sapiens
NYAATTRD
HYAATTRN		 SELEX
Yin et al.(2017)
HESX1_FL_Methyl-HT-SELEX 		0.680 0.230
NOBOX
M09135_2.00 		Homo sapiens
HTAATTRVB
VBYAATTAD		 Misc
Kulakovskiy et al.(2013)
NOBOX_HUMAN.H11MO.0.C 		0.671 0.410
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKC24109 Homeodomain 119 161
EKC24109 Homeodomain 195 212

Links

Other Homeodomain family TFs
Other Crassostrea gigas TFs

135 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R011917 Calypte anna Aan_R011917 I 0.701
ACUA004306 Anopheles culicifacies ACUA004306 I 0.700
ACUA026833 Anopheles culicifacies ACUA026833 I 0.656
ADAC001468 Anopheles darlingi ADAC001468 I 0.679
ADAC008104 Anopheles darlingi ADAC008104 I 0.705
AFAF008499 Anopheles farauti AFAF008499 I 0.700
Alligator_sinensis_CCG014496.1 Alligator sinensis Alligator_sinensis_CCG014496.1 I 0.743
ALUE_0000848601 Ascaris lumbricoides ALUE_0000848601 I 0.691
ALUE_0001497801 Ascaris lumbricoides ALUE_0001497801 I 0.772
AMAM000848 Anopheles maculatus AMAM000848 I 0.656
ANCCAN_10593 Ancylostoma caninum ANCCAN_10593 I 0.659
ASIM_0001230001 Anisakis simplex ASIM_0001230001 I 0.728
ASTEI06918 Anopheles stephensi ASTEI06918 N 0.663
BGIBMGA003233 Bombyx mori BGIBMGA003233 I 0.642
BGLB004491 Biomphalaria glabrata BGLB004491 I 0.711
BGLB009341 Biomphalaria glabrata BGLB009341 I 0.612
BGLB013824 Biomphalaria glabrata BGLB013824 I 0.732
Cflo_02794--XP_001120105.1_APIME Camponotus floridanus Cflo_02794--XP_001120105.1_APIME I 0.668
Cflo_04174--XP_001120833.1_APIME Camponotus floridanus Cflo_04174--XP_001120833.1_APIME I 0.676
CGI_10009720 Crassostrea gigas CGI_10009720 I 0.652
CLEC007171 Cimex lectularius CLEC007171 I 0.761
Cmyd_10001740 Chelonia mydas Cmyd_10001740 I 0.724
Cmyd_10012400 Chelonia mydas Cmyd_10012400 I 0.641
D917_01051 Trichinella nativa D917_01051 I 0.833
DBX1 Callithrix jacchus ENSCJAG00000006734 I 0.611
Dbx1 Dipodomys ordii ENSDORG00000009286 N 0.647
DBX1 Echinops telfairi ENSETEG00000017576 N 0.616
DBX1 Gorilla gorilla ENSGGOG00000014848 N 0.637
DBX1 Ochotona princeps ENSOPRG00000012954 N 0.626
DBX1 Procavia capensis ENSPCAG00000004905 N 0.613
DBX1 Pan troglodytes ENSPTRG00000003437 N 0.637
DBX1 Tursiops truncatus ENSTTRG00000000318 N 0.637
DICVIV_02647 Dictyocaulus viviparus DICVIV_02647 I 0.689
DICVIV_04104 Dictyocaulus viviparus DICVIV_04104 N 0.625
DLX3 Bos taurus ENSBTAG00000017409 I 0.803
DLX4 Bos taurus ENSBTAG00000007353 I 0.798
DLX4 Myotis lucifugus ENSMLUG00000007268 I 0.783
DLX4 Oryctolagus cuniculus ENSOCUG00000022067 I 0.818
drgx Takifugu rubripes ENSTRUG00000013446 I 0.676
ECANG7_01330 Echinococcus canadensis ECANG7_01330 I 0.769
EEL_0000220001 Elaeophora elaphi EEL_0000220001 I 0.642
EFV55592 Trichinella spiralis EFV55592 I 0.686
EFV57629 Trichinella spiralis EFV57629 I 0.833
ENSACAG00000002147 Anolis carolinensis ENSACAG00000002147 I 0.688
ENSAMEG00000004942 Ailuropoda melanoleuca ENSAMEG00000004942 I 0.720
ENSBTAP00000009672-D1 Bos grunniens ENSBTAP00000009672-D1 I 0.798
ENSCSAG00000007090 Chlorocebus sabaeus ENSCSAG00000007090 I 0.691
ENSCSAVG00000000940 Ciona savignyi ENSCSAVG00000000940 I 0.640
ENSFCAG00000029037 Felis catus ENSFCAG00000029037 I 0.668
ENSLACG00000001487 Latimeria chalumnae ENSLACG00000001487 I 0.676
ENSMGAG00000013900 Meleagris gallopavo ENSMGAG00000013900 I 0.665
ENSMMUP00000027138 Macaca fascicularis ENSMMUP00000027138 I 0.691
ENSMODG00000001675 Monodelphis domestica ENSMODG00000001675 I 0.654
ENSMPUG00000007079 Mustela putorius furo ENSMPUG00000007079 I 0.691
ENSNLEG00000003406 Nomascus leucogenys ENSNLEG00000003406 I 0.691
ENSNLEG00000017811 Nomascus leucogenys ENSNLEG00000017811 N 0.637
ENSOARG00000005572 Ovis aries ENSOARG00000005572 I 0.798
ENSP00000360811-D1 Bos grunniens ENSP00000360811-D1 I 0.680
ENSP00000419457-D1 Bos grunniens ENSP00000419457-D1 I 0.691
ENSPANG00000018829 Papio anubis ENSPANG00000018829 I 0.691
ENSPPYG00000003422 Pongo abelii ENSPPYG00000003422 N 0.630
ENSPSIG00000014030 Pelodiscus sinensis ENSPSIG00000014030 I 0.705
ENSSTOG00000026570 Ictidomys tridecemlineatus ENSSTOG00000026570 I 0.675
ENSTSYG00000000516 Tarsius syrichta ENSTSYG00000000516 I 0.615
ENSTSYG00000014450 Tarsius syrichta ENSTSYG00000014450 I 0.708
EVEC_0000357701 Enterobius vermicularis EVEC_0000357701 I 0.705
fgenesh2_pg.scaffold_23000163 Branchiostoma floridae fgenesh2_pg.scaffold_23000163 I 0.641
GF12207 Drosophila ananassae FBgn0089246 I 0.694
GF13343 Drosophila ananassae FBgn0090375 I 0.823
Gfo_R002825 Geospiza fortis Gfo_R002825 I 0.774
GK22877 Drosophila willistoni FBgn0224839 I 0.682
HDID_0000333701 Hymenolepis diminuta HDID_0000333701 N 0.629
HelroG173001 Helobdella robusta HelroG173001 I 0.725
HESX1 Homo sapiens ENSG00000163666 D 0.680
HMEL006244 Heliconius melpomene HMEL006244 I 0.705
HPBE_0000873701 Heligmosomoides bakeri HPBE_0000873701 I 0.672
HPLM_0000971301 Haemonchus placei HPLM_0000971301 I 0.701
HPLM_0001894101 Haemonchus placei HPLM_0001894101 I 0.704
L596_g8967 Steinernema carpocapsae L596_g8967 I 0.649
L798_06393 Zootermopsis nevadensis L798_06393 I 0.729
L798_11440 Zootermopsis nevadensis L798_11440 I 0.647
L892_g24303 Steinernema scapterisci L892_g24303 I 0.700
LDEC008146 Leptinotarsa decemlineata LDEC008146 I 0.720
LHX6 Gorilla gorilla ENSGGOG00000008310 I 0.625
MCINX007054 Melitaea cinxia MCINX007054 I 0.701
MCINX008871 Melitaea cinxia MCINX008871 I 0.712
MCOS_0000004601 Mesocestoides corti MCOS_0000004601 I 0.701
MCOS_0000655901 Mesocestoides corti MCOS_0000655901 N 0.651
meox1 Takifugu rubripes ENSTRUG00000005193 I 0.748
Myotis_brandtii_NOBOX_10026198 Myotis brandtii Myotis_brandtii_NOBOX_10026198 I 0.691
NBR_0000705501 Nippostrongylus brasiliensis NBR_0000705501 I 0.692
NECAME_16530 Necator americanus NECAME_16530 I 0.669
NEMVEDRAFT_v1g198584 Nematostella vectensis NEMVEDRAFT_v1g198584 I 0.599
nLs.2.1.2.g05836 Litomosoides sigmodontis nLs.2.1.2.g05836 I 0.732
NOBOX Canis familiaris ENSCAFG00000003500 I 0.663
NOBOX Callithrix jacchus ENSCJAG00000009917 I 0.691
NOBOX Equus caballus ENSECAG00000003123 I 0.691
NOBOX Felis catus ENSFCAG00000004352 I 0.691
NOBOX Homo sapiens ENSG00000106410 D 0.671
NOBOX Gorilla gorilla ENSGGOG00000022185 I 0.691
NOBOX Myotis lucifugus ENSMLUG00000004209 I 0.691
NOBOX Macaca mulatta ENSMMUG00000020609 I 0.691
NOBOX Oryctolagus cuniculus ENSOCUG00000001027 I 0.707
NOBOX Otolemur garnettii ENSOGAG00000010413 I 0.701
NOBOX Pan troglodytes ENSPTRG00000019828 I 0.671
nRc.2.0.1.g34428 Romanomermis culicivorax nRc.2.0.1.g34428 I 0.700
nRc.2.0.1.g35501 Romanomermis culicivorax nRc.2.0.1.g35501 I 0.679
OESDEN_01216 Oesophagostomum dentatum OESDEN_01216 I 0.640
Ogr03859 Ophisaurus gracilis Ogr03859 I 0.702
Ogr09065 Ophisaurus gracilis Ogr09065 I 0.725
PEQ_0001388201 Parascaris equorum PEQ_0001388201 I 0.659
PPAI007004 Phlebotomus papatasi PPAI007004 I 0.667
PRRX2 Cavia porcellus ENSCPOG00000021821 I 0.692
Pvit_13361 Pogona vitticeps Pvit_13361 I 0.689
SBAD_0000602401 Soboliphyme baturini SBAD_0000602401 I 0.625
scaffold251-EXSNAP2012.22 Pristionchus exspectatus scaffold251-EXSNAP2012.22 I 0.624
SINV13346 Solenopsis invicta SINV13346 I 0.670
SNAPOd2T00016706001 Oikopleura dioica SNAPOd2T00016706001 I 0.699
SPU_004366 Strongylocentrotus purpuratus SPU_004366 I 0.696
SROB_0001564301 Schistosoma rodhaini SROB_0001564301 I 0.603
SSLN_0001460801 Schistocephalus solidus SSLN_0001460801 I 0.698
SVUK_0001056001 Strongylus vulgaris SVUK_0001056001 I 0.613
T265_00628 Opisthorchis viverrini T265_00628 I 0.636
T265_02852 Opisthorchis viverrini T265_02852 I 0.652
T265_14002 Opisthorchis viverrini T265_14002 I 0.661
TC000483 Tribolium castaneum TC000483 I 0.723
TCNE_0000653501 Toxocara canis TCNE_0000653501 I 0.608
TCNE_0001081001 Toxocara canis TCNE_0001081001 I 0.673
TELCIR_07728 Teladorsagia circumcincta TELCIR_07728 I 0.726
tetur02g13510 Tetranychus urticae tetur02g13510 I 0.689
tetur14g02510 Tetranychus urticae tetur14g02510 I 0.712
TTAC_0000027101 Hydatigera taeniaeformis TTAC_0000027101 I 0.728
TTAC_0000701101 Hydatigera taeniaeformis TTAC_0000701101 N 0.641
TTRE_0000072001 Trichuris trichiura TTRE_0000072001 I 0.705
YQE_10100 Dendroctonus ponderosae YQE_10100 I 0.760