Alligator_sinensis_CCG000426.1 (Alligator sinensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Alligator_sinensis_CCG000426.1 T225146_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG000426.1 Homeodomain 1 28

Links

Other Homeodomain family TFs
Other Alligator sinensis TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGL105 Arabidopsis thaliana AT5G37415 I 0.000
AGL53 Arabidopsis thaliana AT5G27070 N 0.000
AGL54 Arabidopsis thaliana AT5G27090 N 0.000
AGL75 Arabidopsis thaliana AT5G41200 I 0.000
AGL76 Arabidopsis thaliana AT5G40120 I 0.000
AGL77 Arabidopsis thaliana AT5G38740 I 0.000
AGL81 Arabidopsis thaliana AT5G39750 I 0.000
AGL89 Arabidopsis thaliana AT5G27580 N 0.000
AGL93 Arabidopsis thaliana AT5G26950 N 0.000
AGL98 Arabidopsis thaliana AT5G39810 I 0.000
Al_scaffold_0007_3741 Arabidopsis lyrata Al_scaffold_0007_3741 I 0.000
AT5G26865 Arabidopsis thaliana AT5G26865 N 0.000
AT5G27944 Arabidopsis thaliana AT5G27944 N 0.000
Bostr.10058s0014 Boechera stricta Bostr.10058s0014 I 0.000
Bostr.29827s0112 Boechera stricta Bostr.29827s0112 N 0.000
Cagra.29077s0001 Capsella grandiflora Cagra.29077s0001 N 0.000
Carubv10003642m.g Capsella rubella Carubv10003642m.g N 0.000
Carubv10003716m.g Capsella rubella Carubv10003716m.g N 0.000
fgenesh2_kg.6__2751__AT5G27070.1 Arabidopsis lyrata fgenesh2_kg.6__2751__AT5G27070.1 N 0.000
scaffold_602835.1 Arabidopsis lyrata scaffold_602835.1 N 0.000
scaffold_704060.1 Arabidopsis lyrata scaffold_704060.1 I 0.000
Thhalv10002808m.g Eutrema salsugineum Thhalv10002808m.g N 0.000
Thhalv10005435m.g Eutrema salsugineum Thhalv10005435m.g N 0.000
Thhalv10005452m.g Eutrema salsugineum Thhalv10005452m.g N 0.000