GLYMA13G21371 (Glycine max)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 GLYMA13G21371 T249117_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G10030
M01258_2.00 		Arabidopsis thaliana
NRMCGTTAWNN
NNWTAACGKYN		 PBM
Lambert et al.(2019)
pTH11538 		0.951 0.819
AT3G10030
M06971_2.00 		Arabidopsis thaliana
HRHCKCCGTTANND
HNNTAACGGMGDYD		 Dap-seq
OMalley et al.(2016)
AT3G10030_col_a 		0.951 0.819
AT3G10030
M06972_2.00 		Arabidopsis thaliana
HWRHMKCCGTTAAHD
HDTTAACGGMKDYWD		 Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a 		0.951 0.819
PK04914.1
M01262_2.00 		Cannabis sativa
DCCGTYAN
NTRACGGH		 PBM
Lambert et al.(2019)
pTH10098 		0.945 0.778
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA13G21371.1 MADF 116 195

Links

Other MADF family TFs
Other Glycine max TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28077.m000081 Ricinus communis 28077.m000081 I 0.891
29815.m000504 Ricinus communis 29815.m000504 I 0.951
AMTR_s00006p00265300 Amborella trichopoda AMTR_s00006p00265300 I 0.877
Aquca_009_01006 Aquilegia coerulea Aquca_009_01006 I 0.888
Aquca_019_00072 Aquilegia coerulea Aquca_019_00072 I 0.936
AT3G10030 Arabidopsis thaliana AT3G10030 D 0.951
BGIOSGA016339 Oryza indica BGIOSGA016339 I 0.857
Bo5g137800 Brassica oleracea Bo5g137800 I 0.947
Bostr.22252s0062 Boechera stricta Bostr.22252s0062 I 0.951
Bra029812 Brassica rapa Bra029812 I 0.947
BRADI5G08980 Brachypodium distachyon BRADI5G08980 I 0.854
Cagra.4686s0014 Capsella grandiflora Cagra.4686s0014 I 0.944
Carubv10015256m.g Capsella rubella Carubv10015256m.g I 0.944
cassava30771.valid.m1 Manihot esculenta cassava30771.valid.m1 I 0.955
Ca_20148 Cicer arietinum Ca_20148 I 0.964
Ciclev10011433m.g Citrus clementina Ciclev10011433m.g I 0.960
Cla018015 Citrullus lanatus Cla018015 I 0.963
Cucsa.378670 Cucumis sativus Cucsa.378670 I 0.963
Eucgr.A01571 Eucalyptus grandis Eucgr.A01571 I 0.958
evm.TU.supercontig_128.55 Carica papaya evm.TU.supercontig_128.55 I 0.898
F775_31501 Aegilops tauschii F775_31501 I 0.854
fgenesh1_pm.C_scaffold_3000820 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000820 I 0.950
gene30101-v1.0-hybrid Fragaria vesca gene30101-v1.0-hybrid I 0.930
GLYMA10G07490 Glycine max GLYMA10G07490 I 0.971
GLYMA10G34520 Glycine max GLYMA10G34520 I 0.924
GLYMA20G33031 Glycine max GLYMA20G33031 I 0.834
Gorai.007G371500 Gossypium raimondii Gorai.007G371500 I 0.956
GRMZM2G002978 Zea mays GRMZM2G002978 I 0.845
GSMUA_Achr2G20220_001 Musa acuminata GSMUA_Achr2G20220_001 I 0.907
GSMUA_Achr6G13420_001 Musa acuminata GSMUA_Achr6G13420_001 I 0.895
LPERR04G08300 Leersia perrieri LPERR04G08300 I 0.852
MDP0000201016 Malus domestica MDP0000201016 I 0.918
MDP0000399495 Malus domestica MDP0000399495 I 0.918
MDP0000415733 Malus domestica MDP0000415733 I 0.918
mgf008067m Mimulus guttatus mgf008067m I 0.940
MLOC_28975 Hordeum vulgare MLOC_28975 I 0.866
MTR_1g061600 Medicago truncatula MTR_1g061600 I 0.963
OB04G18670 Oryza brachyantha OB04G18670 I 0.855
OGLUM04G11230 Oryza glumaepatula OGLUM04G11230 I 0.857
OMERI04G10080 Oryza meridionalis OMERI04G10080 I 0.857
ONIVA04G09510 Oryza nivara ONIVA04G09510 I 0.857
OPUNC04G09570 Oryza punctata OPUNC04G09570 I 0.857
Pavir.Gb01778 Panicum virgatum Pavir.Gb01778 I 0.843
Pavir.J13370 Panicum virgatum Pavir.J13370 I 0.847
PGSC0003DMG400002727 Solanum tuberosum PGSC0003DMG400002727 I 0.969
PK04914.1 Cannabis sativa PK04914.1 D 0.945
Pm026265 Prunus mume Pm026265 I 0.950
POPTR_0006s11850 Populus trichocarpa POPTR_0006s11850 I 0.922
POPTR_0008s02730 Populus trichocarpa POPTR_0008s02730 I 0.890
POPTR_0010s23970 Populus trichocarpa POPTR_0010s23970 I 0.886
PRUPE_ppa004154mg Prunus persica PRUPE_ppa004154mg I 0.950
PRUPE_ppa022998mg Prunus persica PRUPE_ppa022998mg I 0.926
SapurV1A.0226s0070 Salix purpurea SapurV1A.0226s0070 I 0.923
SapurV1A.0243s0300 Salix purpurea SapurV1A.0243s0300 I 0.885
SapurV1A.0439s0120 Salix purpurea SapurV1A.0439s0120 I 0.885
Sb06g015280 Sorghum bicolor Sb06g015280 I 0.848
SELMODRAFT_130409 Selaginella moellendorffii SELMODRAFT_130409 I 0.847
SELMODRAFT_134056 Selaginella moellendorffii SELMODRAFT_134056 I 0.847
Si009787m.g Setaria italica Si009787m.g I 0.841
Solyc09g008850.2 Solanum lycopersicum Solyc09g008850.2 I 0.966
TCM_022397 Theobroma cacao TCM_022397 I 0.947
TCM_043551 Theobroma cacao TCM_043551 I 0.898
Thhalv10020471m.g Eutrema salsugineum Thhalv10020471m.g I 0.944
Traes_2AL_246006E77 Triticum aestivum Traes_2AL_246006E77 I 0.854
Traes_2BL_83EDE2CBB Triticum aestivum Traes_2BL_83EDE2CBB I 0.854
TRIUR3_22240 Triticum urartu TRIUR3_22240 I 0.854
VIT_08s0007g04160 Vitis vinifera VIT_08s0007g04160 I 0.963
VIT_13s0074g00240 Vitis vinifera VIT_13s0074g00240 I 0.934