evm.TU.contig_38802 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.contig_38802 T258118_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.TU.contig_38802.1 MADS box 20 67

Links

Other MADS box family TFs
Other Carica papaya TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.708
evm.TU.contig_30005.2 Carica papaya evm.TU.contig_30005.2 N 0.958
evm.TU.contig_31965.1 Carica papaya evm.TU.contig_31965.1 N 0.958
evm.TU.contig_35554.1 Carica papaya evm.TU.contig_35554.1 N 0.958
evm.TU.contig_37718 Carica papaya evm.TU.contig_37718 N 0.979
evm.TU.contig_37906 Carica papaya evm.TU.contig_37906 N 0.979
evm.TU.contig_43437.1 Carica papaya evm.TU.contig_43437.1 N 0.938
evm.TU.supercontig_2423.4 Carica papaya evm.TU.supercontig_2423.4 N 0.938
evm.TU.supercontig_347.14 Carica papaya evm.TU.supercontig_347.14 N 0.958
evm.TU.supercontig_347.5 Carica papaya evm.TU.supercontig_347.5 N 0.938
evm.TU.supercontig_348.10 Carica papaya evm.TU.supercontig_348.10 N 0.979
evm.TU.supercontig_439.5 Carica papaya evm.TU.supercontig_439.5 N 0.938
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.708
MDP0000233925 Malus domestica MDP0000233925 N 0.708
MDP0000278770 Malus domestica MDP0000278770 N 0.708
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.729
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.708
Pm021017 Prunus mume Pm021017 N 0.708
PRUPE_ppa022494mg Prunus persica PRUPE_ppa022494mg N 0.708