ACHR006794 (Anopheles christyi)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 ACHR006794 T259475_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bs
M03915_2.00 		Drosophila melanogaster
NCCWTATAWGGN
NCCWTATAWGGN		 SELEX
Nitta et al.(2015)
bs_1 		0.733 0.733
bs
M03916_2.00 		Drosophila melanogaster
NCCWTAHAWGGH
DCCWTDTAWGGN		 SELEX
Nitta et al.(2015)
bs_2 		0.733 0.733
Srf
M00178_2.00 		Mus musculus
NNDDWWHHNN
NNDDWWHHNN		 PBM
Badis et al.(2009)
Srf_3509 		0.700 0.700
unc-120
M00684_2.00 		Caenorhabditis elegans
CHWAWWDGG
CCHWWTWDG		 PBM
Narasimhan et al.(2015)
pTH10822 		0.700 0.700
SRF
M03341_2.00 		Homo sapiens
DCCWTATATGGT
ACCATATAWGGH		 SELEX
Jolma et al.(2013)
SRF_1 		0.700 0.700
SRF
M03342_2.00 		Homo sapiens
TKHCCWTATATGGKMA
TKMCCATATAWGGDMA		 SELEX
Jolma et al.(2013)
SRF_2 		0.700 0.700
SRF
M05553_2.00 		Homo sapiens
CCNTANAWGG
CCWTNTANGG		 SELEX
Yin et al.(2017)
SRF_eDBD_HT-SELEX 		0.700 0.700
SRF
M07981_2.00 		Homo sapiens
NNNWDNCCAWAWAWGGNVD
HBNCCWTWTWTGGNHWNNN		 ChIP-seq
Gerstein et al.(2012)
GM12878_SRF_HudsonAlpha 		0.700 0.700
SRF
M07982_2.00 		Homo sapiens
CCAWATAAGGNMAD
HTKNCCTTATWTGG		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_SRF_HudsonAlpha 		0.700 0.700
SRF
M07983_2.00 		Homo sapiens
NNWNNCCAWAWAWGGNVD
HBNCCWTWTWTGGNNWNN		 ChIP-seq
Gerstein et al.(2012)
HepG2_SRF_HudsonAlpha 		0.700 0.700
SRF
M07984_2.00 		Homo sapiens
GNCCAWATADGGHMANN
NNTKDCCHTATWTGGNC		 ChIP-seq
Gerstein et al.(2012)
K562_SRF_HudsonAlpha 		0.700 0.700
SRF
M09249_2.00 		Homo sapiens
HNWBVCCAWAWAWGGNRR
YYNCCWTWTWTGGBVWND		 Misc
Kulakovskiy et al.(2013)
SRF_HUMAN.H11MO.0.A 		0.700 0.700
Srf
M09254_2.00 		Mus musculus
NWDVCCAWAWAWGGVMR
YKBCCWTWTWTGGBHWN		 Misc
Kulakovskiy et al.(2013)
SRF_MOUSE.H11MO.0.A 		0.700 0.700
Srf
M09598_2.00 		Mus musculus
CCWWATWWGGNH
DNCCWWATWWGG		 Misc
Heinz et al.(2010)
PUER-Srf_Sullivan_et_al. 		0.700 0.700
SRF
M10947_2.00 		Homo sapiens
MNBWCCWTATAWGGGCAT
ATGCCCWTATAWGGWVNK		 Transfac
Matys et al.(2006)
V$SRF_01 		0.700 0.700
SRF
M10948_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_02 		0.700 0.700
SRF
M10949_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_03 		0.700 0.700
SRF
M10950_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_09 		0.700 0.700
SRF
M10951_2.00 		Homo sapiens
DCCWTATAWGGVSHB
VDSBCCWTATAWGGH		 Transfac
Matys et al.(2006)
V$SRF_C 		0.700 0.700
SRF
M10952_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q3 		0.700 0.700
SRF
M10953_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q4 		0.700 0.700
SRF
M10954_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q5_01 		0.700 0.700
SRF
M10955_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q5_02 		0.700 0.700
SRF
M10956_2.00 		Homo sapiens
BNCCAWATAWGGVN
NBCCWTATWTGGNV		 Transfac
Matys et al.(2006)
V$SRF_Q6 		0.700 0.700
SRF
M05554_2.00 		Homo sapiens
CCNTAYAWGG
CCWTRTANGG		 SELEX
Yin et al.(2017)
SRF_eDBD_Methyl-HT-SELEX 		0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACHR006794-PA MADS box 155 184

Links

Other MADS box family TFs
Other Anopheles christyi TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29889.m003248 Ricinus communis 29889.m003248 I
AT4G16141 Arabidopsis thaliana AT4G16141 I
BGIOSGA000005 Oryza indica BGIOSGA000005 I
BGIOSGA013867 Oryza indica BGIOSGA013867 I
BGIOSGA013869 Oryza indica BGIOSGA013869 I
Bo00847s050 Brassica oleracea Bo00847s050 I
Bo1g055120 Brassica oleracea Bo1g055120 I
Bo1g122970 Brassica oleracea Bo1g122970 I
Bo1g147740 Brassica oleracea Bo1g147740 I
Bo3g068560 Brassica oleracea Bo3g068560 I
Bo5g123610 Brassica oleracea Bo5g123610 I
Bo7g092660 Brassica oleracea Bo7g092660 I
Bo7g104200 Brassica oleracea Bo7g104200 I
Bostr.15774s0060 Boechera stricta Bostr.15774s0060 I
Bostr.22252s0362 Boechera stricta Bostr.22252s0362 I
Bostr.28625s0006 Boechera stricta Bostr.28625s0006 I
Bostr.30275s0055 Boechera stricta Bostr.30275s0055 I
Bra012742 Brassica rapa Bra012742 I
Bra020650 Brassica rapa Bra020650 I
Bra021209 Brassica rapa Bra021209 I
Bra022184 Brassica rapa Bra022184 I
Bra033533 Brassica rapa Bra033533 I
Bra037421 Brassica rapa Bra037421 I
Bra040288 Brassica rapa Bra040288 I
BRADI1G03020 Brachypodium distachyon BRADI1G03020 I
BRADI2G62660 Brachypodium distachyon BRADI2G62660 I
Cagra.0053s0014 Capsella grandiflora Cagra.0053s0014 I
Cagra.0133s0025 Capsella grandiflora Cagra.0133s0025 I
Cagra.5497s0020 Capsella grandiflora Cagra.5497s0020 I
Carubv10005860m.g Capsella rubella Carubv10005860m.g I
Carubv10014665m.g Capsella rubella Carubv10014665m.g I
Carubv10014841m.g Capsella rubella Carubv10014841m.g I
Carubv10027332m.g Capsella rubella Carubv10027332m.g I
cassava15577.m1 Manihot esculenta cassava15577.m1 I
cassava15588.m1 Manihot esculenta cassava15588.m1 I
cassava37139.valid.m1 Manihot esculenta cassava37139.valid.m1 I
cassava43030.valid.m1 Manihot esculenta cassava43030.valid.m1 I
Ca_02992 Cicer arietinum Ca_02992 I
Ciclev10003698m.g Citrus clementina Ciclev10003698m.g I
Ciclev10006161m.g Citrus clementina Ciclev10006161m.g I
Ciclev10022856m.g Citrus clementina Ciclev10022856m.g I
Cla009422 Citrullus lanatus Cla009422 I
Cla022104 Citrullus lanatus Cla022104 I
Cucsa.069460 Cucumis sativus Cucsa.069460 I
Cucsa.252730 Cucumis sativus Cucsa.252730 I
Eucgr.A00193 Eucalyptus grandis Eucgr.A00193 I
Eucgr.H04023 Eucalyptus grandis Eucgr.H04023 I
evm.TU.supercontig_151.51 Carica papaya evm.TU.supercontig_151.51 I
evm.TU.supercontig_48.133 Carica papaya evm.TU.supercontig_48.133 I
evm.TU.supercontig_9.102 Carica papaya evm.TU.supercontig_9.102 I
F775_43556 Aegilops tauschii F775_43556 I
fgenesh1_pm.C_scaffold_7002128 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7002128 I
GATA15 Arabidopsis thaliana AT3G06740 D
GATA15 Arabidopsis lyrata fgenesh2_kg.3__690__AT3G06740.1 I
GATA16 Arabidopsis lyrata scaffold_801309.1 I
GATA17 Arabidopsis thaliana AT3G16870 I
GATA17 Arabidopsis lyrata fgenesh2_kg.3__1856__AT3G16870.1 I
gene05175-v1.0-hybrid Fragaria vesca gene05175-v1.0-hybrid I
GLYMA07G37190 Glycine max GLYMA07G37190 I
GLYMA17G03410 Glycine max GLYMA17G03410 I
Gorai.005G065300 Gossypium raimondii Gorai.005G065300 I
Gorai.007G125000 Gossypium raimondii Gorai.007G125000 I
Gorai.008G142200 Gossypium raimondii Gorai.008G142200 I
Gorai.013G127900 Gossypium raimondii Gorai.013G127900 I
GRMZM2G114775 Zea mays GRMZM2G114775 I
LjSGA_011217.1 Lotus japonicus LjSGA_011217.1 I
LPERR03G33900 Leersia perrieri LPERR03G33900 I
LPERR04G11580 Leersia perrieri LPERR04G11580 I
Lus10016849.g Linum usitatissimum Lus10016849.g I
Lus10031464.g Linum usitatissimum Lus10031464.g I
Lus10037721.g Linum usitatissimum Lus10037721.g I
MDP0000309902 Malus domestica MDP0000309902 I
mgf003937m Mimulus guttatus mgf003937m I
mgf022078m Mimulus guttatus mgf022078m I
MLOC_54886 Hordeum vulgare MLOC_54886 I
MTR_4g121110 Medicago truncatula MTR_4g121110 I
OB01G55040 Oryza brachyantha OB01G55040 I
OBART01G45830 Oryza barthii OBART01G45830 I
OBART03G39750 Oryza barthii OBART03G39750 I
OGLUM01G50190 Oryza glumaepatula OGLUM01G50190 I
OGLUM03G39650 Oryza glumaepatula OGLUM03G39650 I
OLONG_011157 Oryza longistaminata OLONG_011157 I
OLONG_023900 Oryza longistaminata OLONG_023900 I
OMERI03G36600 Oryza meridionalis OMERI03G36600 I
ONIVA01G52080 Oryza nivara ONIVA01G52080 I
ONIVA03G41600 Oryza nivara ONIVA03G41600 I
OPUNC03G36900 Oryza punctata OPUNC03G36900 I
OPUNC03G36910 Oryza punctata OPUNC03G36910 I
orange1.1g030971m.g Citrus sinensis orange1.1g030971m.g I
orange1.1g032112m.g Citrus sinensis orange1.1g032112m.g I
orange1.1g033001m.g Citrus sinensis orange1.1g033001m.g I
ORGLA01G0395900 Oryza glaberrima ORGLA01G0395900 I
ORUFI01G49320 Oryza rufipogon ORUFI01G49320 I
ORUFI03G41540 Oryza rufipogon ORUFI03G41540 I
OS01G0976800 Oryza sativa OS01G0976800 I
OS03G0831200 Oryza sativa OS03G0831200 I
Pavir.Eb04066 Panicum virgatum Pavir.Eb04066 I
Pavir.J03766 Panicum virgatum Pavir.J03766 I
Pavir.J12379 Panicum virgatum Pavir.J12379 I
PGSC0003DMG400002337 Solanum tuberosum PGSC0003DMG400002337 I
PGSC0003DMG400004624 Solanum tuberosum PGSC0003DMG400004624 I
PGSC0003DMG400023434 Solanum tuberosum PGSC0003DMG400023434 I
PGSC0003DMG400024783 Solanum tuberosum PGSC0003DMG400024783 I
PK18820.1 Cannabis sativa PK18820.1 I
PK21934.1 Cannabis sativa PK21934.1 I
Pm003128 Prunus mume Pm003128 I
Pm008287 Prunus mume Pm008287 I
POPTR_0005s02040 Populus trichocarpa POPTR_0005s02040 I
POPTR_0008s22950 Populus trichocarpa POPTR_0008s22950 I
POPTR_0010s00360 Populus trichocarpa POPTR_0010s00360 I
PRUPE_ppa013171mg Prunus persica PRUPE_ppa013171mg I
PRUPE_ppa015310mg Prunus persica PRUPE_ppa015310mg I
SapurV1A.0107s0060 Salix purpurea SapurV1A.0107s0060 I
SapurV1A.0186s0560 Salix purpurea SapurV1A.0186s0560 I
SapurV1A.0739s0060 Salix purpurea SapurV1A.0739s0060 I
SapurV1A.2413s0010 Salix purpurea SapurV1A.2413s0010 I
Sb01g002270 Sorghum bicolor Sb01g002270 I
Sb03g047520 Sorghum bicolor Sb03g047520 I
Si002983m.g Setaria italica Si002983m.g I
Si037892m.g Setaria italica Si037892m.g I
Solyc01g100220.2 Solanum lycopersicum Solyc01g100220.2 I
Solyc05g054400.2 Solanum lycopersicum Solyc05g054400.2 I
Solyc12g099370.1 Solanum lycopersicum Solyc12g099370.1 I
TCM_004753 Theobroma cacao TCM_004753 I
TCM_021303 Theobroma cacao TCM_021303 I
TCM_026732 Theobroma cacao TCM_026732 I
Thhalv10005103m.g Eutrema salsugineum Thhalv10005103m.g I
Thhalv10021612m.g Eutrema salsugineum Thhalv10021612m.g I
Thhalv10021708m.g Eutrema salsugineum Thhalv10021708m.g I
Thhalv10026300m.g Eutrema salsugineum Thhalv10026300m.g I
TRAES3BF026000060CFD_g Triticum aestivum TRAES3BF026000060CFD_g I
Traes_3AL_6DE434492 Triticum aestivum Traes_3AL_6DE434492 I
Traes_5BL_F258582BB Triticum aestivum Traes_5BL_F258582BB I
TRIUR3_03165 Triticum urartu TRIUR3_03165 I
VIT_05s0077g01450 Vitis vinifera VIT_05s0077g01450 I
VIT_14s0060g01520 Vitis vinifera VIT_14s0060g01520 I