Bra007723 (Brassica rapa)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 Bra007723 T259949_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra007723.1-P MBD 301 374

Links

Other MBD family TFs
Other Brassica rapa TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27996.m000153 Ricinus communis 27996.m000153 N
Al_scaffold_0004_1965 Arabidopsis lyrata Al_scaffold_0004_1965 N
AMTR_s00011p00235740 Amborella trichopoda AMTR_s00011p00235740 N
Aquca_003_00697 Aquilegia coerulea Aquca_003_00697 N
Aquca_020_00213 Aquilegia coerulea Aquca_020_00213 N
BHLH52 Arabidopsis thaliana AT1G30670 N
BHLH53 Arabidopsis thaliana AT2G34820 N
Bo3g028090 Brassica oleracea Bo3g028090 N
Bo4g039270 Brassica oleracea Bo4g039270 N
Bostr.15697s0367 Boechera stricta Bostr.15697s0367 N
Bostr.23794s0621 Boechera stricta Bostr.23794s0621 N
Bra005389 Brassica rapa Bra005389 N
Bra022993 Brassica rapa Bra022993 N
Cagra.1508s0136 Capsella grandiflora Cagra.1508s0136 N
Carubv10011063m.g Capsella rubella Carubv10011063m.g N
cassava27522.m1 Manihot esculenta cassava27522.m1 N
cassava8426.m1 Manihot esculenta cassava8426.m1 N
Ca_13608 Cicer arietinum Ca_13608 N
Ca_13610 Cicer arietinum Ca_13610 N
Ciclev10017579m.g Citrus clementina Ciclev10017579m.g N
Cla020055 Citrullus lanatus Cla020055 N
Cucsa.167440 Cucumis sativus Cucsa.167440 N
Eucgr.D01630 Eucalyptus grandis Eucgr.D01630 N
evm.TU.supercontig_489.6 Carica papaya evm.TU.supercontig_489.6 N
fgenesh1_pm.C_scaffold_1002485 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002485 N
gene18542-v1.0-hybrid Fragaria vesca gene18542-v1.0-hybrid N
GLYMA08G17747 Glycine max GLYMA08G17747 N
GLYMA15G41400 Glycine max GLYMA15G41400 N
Gorai.002G107000 Gossypium raimondii Gorai.002G107000 N
Gorai.005G218900 Gossypium raimondii Gorai.005G218900 N
GSMUA_Achr11G16900_001 Musa acuminata GSMUA_Achr11G16900_001 N
GSMUA_AchrUn_randomG20690_001 Musa acuminata GSMUA_AchrUn_randomG20690_001 N
Lus10005451.g Linum usitatissimum Lus10005451.g N
Lus10038432.g Linum usitatissimum Lus10038432.g N
MDP0000209483 Malus domestica MDP0000209483 N
MDP0000216053 Malus domestica MDP0000216053 N
MDP0000280921 Malus domestica MDP0000280921 N
mgf020354m Mimulus guttatus mgf020354m N
MTR_1g060700 Medicago truncatula MTR_1g060700 N
MTR_2g067000 Medicago truncatula MTR_2g067000 N
orange1.1g041370m.g Citrus sinensis orange1.1g041370m.g N
PGSC0003DMG400020812 Solanum tuberosum PGSC0003DMG400020812 N
PGSC0003DMG400044874 Solanum tuberosum PGSC0003DMG400044874 N
Pm010610 Prunus mume Pm010610 N
POPTR_0001s46530 Populus trichocarpa POPTR_0001s46530 N
POPTR_0011s16100 Populus trichocarpa POPTR_0011s16100 N
PRUPE_ppa017597mg Prunus persica PRUPE_ppa017597mg N
PRUPE_ppa025945mg Prunus persica PRUPE_ppa025945mg N
SapurV1A.0527s0040 Salix purpurea SapurV1A.0527s0040 N
SapurV1A.0602s0120 Salix purpurea SapurV1A.0602s0120 N
Si038598m.g Setaria italica Si038598m.g N
Solyc08g075090.2 Solanum lycopersicum Solyc08g075090.2 N
Solyc08g075110.1 Solanum lycopersicum Solyc08g075110.1 N
TCM_027032 Theobroma cacao TCM_027032 N
TCM_033386 Theobroma cacao TCM_033386 N
Thhalv10009765m.g Eutrema salsugineum Thhalv10009765m.g N
Thhalv10017751m.g Eutrema salsugineum Thhalv10017751m.g N
VIT_10s0092g00030 Vitis vinifera VIT_10s0092g00030 N