Cagra.2178s0009 (Capsella grandiflora)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Cagra.2178s0009 T261449_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.2178s0009.1.p MBD 146 220

Links

Other MBD family TFs
Other Capsella grandiflora TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30190.m011218 Ricinus communis 30190.m011218 N
AMTR_s00009p00253500 Amborella trichopoda AMTR_s00009p00253500 N
Aquca_038_00045 Aquilegia coerulea Aquca_038_00045 N
AT1G63490 Arabidopsis thaliana AT1G63490 N
Bo9g029100 Brassica oleracea Bo9g029100 N
Bostr.9600s0015 Boechera stricta Bostr.9600s0015 N
BRADI1G29247 Brachypodium distachyon BRADI1G29247 N
Cagra.2104s0024 Capsella grandiflora Cagra.2104s0024 N
cassava14944.m1 Manihot esculenta cassava14944.m1 N
chr2.CM0304.950.nc Lotus japonicus chr2.CM0304.950.nc N
Cla007529 Citrullus lanatus Cla007529 I
Cla011637 Citrullus lanatus Cla011637 N
Eucgr.D01851 Eucalyptus grandis Eucgr.D01851 N
gene32474-v1.0-hybrid Fragaria vesca gene32474-v1.0-hybrid N
GLYMA01G42890 Glycine max GLYMA01G42890 N
GLYMA11G02580 Glycine max GLYMA11G02580 N
Gorai.004G211700 Gossypium raimondii Gorai.004G211700 N
GRMZM2G466292 Zea mays GRMZM2G466292 N
Lus10008495.g Linum usitatissimum Lus10008495.g N
MDP0000158904 Malus domestica MDP0000158904 N
MDP0000162827 Malus domestica MDP0000162827 N
MDP0000286412 Malus domestica MDP0000286412 N
MDP0000287313 Malus domestica MDP0000287313 N
mgf018831m Mimulus guttatus mgf018831m N
MTR_5g010300 Medicago truncatula MTR_5g010300 N
orange1.1g000212m.g Citrus sinensis orange1.1g000212m.g N
orange1.1g020305m.g Citrus sinensis orange1.1g020305m.g I
PDK_20s1401711g002 Phoenix dactylifera PDK_20s1401711g002 N
PK05702.1 Cannabis sativa PK05702.1 N
Pm023825 Prunus mume Pm023825 N
Sb10g031260 Sorghum bicolor Sb10g031260 N
scaffold_200168.1 Arabidopsis lyrata scaffold_200168.1 N
Solyc08g081000.2 Solanum lycopersicum Solyc08g081000.2 N
TCM_016246 Theobroma cacao TCM_016246 N
Thhalv10023217m.g Eutrema salsugineum Thhalv10023217m.g N