CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.002G238300
(
Gossypium raimondii
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Gorai.002G238300
T298054_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.002G238300.1
NAC/NAM
5
140
PPGFRFYPTEEELVSFYLHKKLEAKTDDDLNHVMNRVIPVVDIYNFNPWDLPRFSDNLCHKDPEQWFFFIPRQESEARGGRPKRLTSSGYWKATGSPGYVYSFNSRPIGVKRTMVFYNGRAPNGKKTDWKMNEYKA
Links
Other
NAC/NAM
family TFs
Other
Gossypium raimondii
TFs
154 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28629.m000575
Ricinus communis
28629.m000575
N
0.912
30055.m001588
Ricinus communis
30055.m001588
N
0.970
anac090
Arabidopsis lyrata
fgenesh2_kg.6__2228__AT5G22380.1
N
0.946
Aquca_005_00168
Aquilegia coerulea
Aquca_005_00168
N
0.985
BGIOSGA004848
Oryza indica
BGIOSGA004848
N
0.891
BGIOSGA037019
Oryza indica
BGIOSGA037019
N
0.946
Bo2g023870
Brassica oleracea
Bo2g023870
N
0.931
Bo3g016870
Brassica oleracea
Bo3g016870
N
0.934
Bo9g148540
Brassica oleracea
Bo9g148540
N
0.930
Bostr.26527s0039
Boechera stricta
Bostr.26527s0039
N
0.932
Bra002408
Brassica rapa
Bra002408
N
0.932
Bra006624
Brassica rapa
Bra006624
N
0.929
Bra020188
Brassica rapa
Bra020188
N
0.931
BRADI2G55780
Brachypodium distachyon
BRADI2G55780
N
0.882
Cagra.0846s0014
Capsella grandiflora
Cagra.0846s0014
N
0.933
Carubv10001788m.g
Capsella rubella
Carubv10001788m.g
N
0.933
cassava13394.valid.m1
Manihot esculenta
cassava13394.valid.m1
N
0.953
cassava14235.m1
Manihot esculenta
cassava14235.m1
N
0.965
cassava15680.m1
Manihot esculenta
cassava15680.m1
N
0.927
cassava15688.m1
Manihot esculenta
cassava15688.m1
N
0.971
cassava19207.valid.m1
Manihot esculenta
cassava19207.valid.m1
N
0.894
cassava32867.m1
Manihot esculenta
cassava32867.m1
N
0.963
cassava3989.m1
Manihot esculenta
cassava3989.m1
N
0.946
Ca_00818
Cicer arietinum
Ca_00818
N
0.924
Ca_15160
Cicer arietinum
Ca_15160
N
0.899
Ciclev10012468m.g
Citrus clementina
Ciclev10012468m.g
N
0.940
Ciclev10029032m.g
Citrus clementina
Ciclev10029032m.g
N
0.954
Cla003087
Citrullus lanatus
Cla003087
I
0.923
Cla008777
Citrullus lanatus
Cla008777
N
0.924
Cla018691
Citrullus lanatus
Cla018691
N
0.977
Cucsa.083530
Cucumis sativus
Cucsa.083530
N
0.976
Cucsa.185760
Cucumis sativus
Cucsa.185760
N
0.927
Cucsa.319840
Cucumis sativus
Cucsa.319840
I
0.939
Eucgr.A02635
Eucalyptus grandis
Eucgr.A02635
N
0.979
Eucgr.A02636
Eucalyptus grandis
Eucgr.A02636
N
0.968
Eucgr.A02637
Eucalyptus grandis
Eucgr.A02637
N
0.967
Eucgr.A02638
Eucalyptus grandis
Eucgr.A02638
N
0.948
Eucgr.A02639
Eucalyptus grandis
Eucgr.A02639
N
0.959
Eucgr.C02446
Eucalyptus grandis
Eucgr.C02446
N
0.943
Eucgr.I00583
Eucalyptus grandis
Eucgr.I00583
N
0.933
Eucgr.I00587
Eucalyptus grandis
Eucgr.I00587
N
0.943
Eucgr.J00505
Eucalyptus grandis
Eucgr.J00505
N
0.941
Eucgr.J00508
Eucalyptus grandis
Eucgr.J00508
N
0.941
Eucgr.J00509
Eucalyptus grandis
Eucgr.J00509
N
0.910
Eucgr.J00511
Eucalyptus grandis
Eucgr.J00511
N
0.941
Eucgr.J00512
Eucalyptus grandis
Eucgr.J00512
N
0.943
Eucgr.J00513
Eucalyptus grandis
Eucgr.J00513
N
0.944
Eucgr.J00514
Eucalyptus grandis
Eucgr.J00514
N
0.942
Eucgr.J00516
Eucalyptus grandis
Eucgr.J00516
N
0.937
Eucgr.J00517
Eucalyptus grandis
Eucgr.J00517
N
0.918
Eucgr.J00518
Eucalyptus grandis
Eucgr.J00518
N
0.927
Eucgr.J00519
Eucalyptus grandis
Eucgr.J00519
N
0.885
Eucgr.J00520
Eucalyptus grandis
Eucgr.J00520
N
0.920
evm.TU.supercontig_104.98
Carica papaya
evm.TU.supercontig_104.98
N
0.927
evm.TU.supercontig_195.14
Carica papaya
evm.TU.supercontig_195.14
N
0.957
F775_13455
Aegilops tauschii
F775_13455
N
0.894
F775_19761
Aegilops tauschii
F775_19761
N
0.874
gene15644-v1.0-hybrid
Fragaria vesca
gene15644-v1.0-hybrid
N
0.938
gene21734-v1.0-hybrid
Fragaria vesca
gene21734-v1.0-hybrid
N
0.959
GLYMA03G35570
Glycine max
GLYMA03G35570
N
0.924
GLYMA12G09670
Glycine max
GLYMA12G09670
N
0.899
GLYMA12G31150
Glycine max
GLYMA12G31150
N
0.923
GLYMA13G39160
Glycine max
GLYMA13G39160
N
0.923
GLYMA19G38211
Glycine max
GLYMA19G38211
N
0.936
Gorai.001G122800
Gossypium raimondii
Gorai.001G122800
N
0.937
Gorai.009G399900
Gossypium raimondii
Gorai.009G399900
N
0.925
GRMZM2G439903
Zea mays
GRMZM2G439903
N
0.928
GRMZM2G465835
Zea mays
GRMZM2G465835
N
0.931
GSMUA_Achr10G04720_001
Musa acuminata
GSMUA_Achr10G04720_001
N
0.939
GSMUA_Achr6G19400_001
Musa acuminata
GSMUA_Achr6G19400_001
N
0.932
GSMUA_Achr8G01410_001
Musa acuminata
GSMUA_Achr8G01410_001
N
0.955
GSMUA_Achr9G29750_001
Musa acuminata
GSMUA_Achr9G29750_001
N
0.920
LPERR01G32790
Leersia perrieri
LPERR01G32790
N
0.889
LPERR05G14390
Leersia perrieri
LPERR05G14390
N
0.940
LPERR11G02950
Leersia perrieri
LPERR11G02950
N
0.941
LPERR12G03220
Leersia perrieri
LPERR12G03220
N
0.915
Lus10004846.g
Linum usitatissimum
Lus10004846.g
N
0.962
Lus10020643.g
Linum usitatissimum
Lus10020643.g
N
0.962
Lus10029410.g
Linum usitatissimum
Lus10029410.g
N
0.913
MDP0000130797
Malus domestica
MDP0000130797
N
0.964
MDP0000205938
Malus domestica
MDP0000205938
N
0.953
MDP0000759504
Malus domestica
MDP0000759504
N
0.964
mgf020234m
Mimulus guttatus
mgf020234m
N
0.975
mgf024293m
Mimulus guttatus
mgf024293m
N
0.878
MLOC_60153
Hordeum vulgare
MLOC_60153
N
0.899
MLOC_7757
Hordeum vulgare
MLOC_7757
N
0.890
MTR_2g086690
Medicago truncatula
MTR_2g086690
N
0.945
MTR_4g052620
Medicago truncatula
MTR_4g052620
N
0.902
MTR_7g105170
Medicago truncatula
MTR_7g105170
N
0.951
NAC090
Arabidopsis thaliana
AT5G22380
N
0.941
OB05G26010
Oryza brachyantha
OB05G26010
N
0.923
OB12G13350
Oryza brachyantha
OB12G13350
N
0.943
OBART01G38190
Oryza barthii
OBART01G38190
N
0.891
OBART12G03440
Oryza barthii
OBART12G03440
N
0.946
OGLUM01G42380
Oryza glumaepatula
OGLUM01G42380
N
0.891
OGLUM12G04110
Oryza glumaepatula
OGLUM12G04110
N
0.946
OMERI01G35090
Oryza meridionalis
OMERI01G35090
N
0.891
ONIVA01G42870
Oryza nivara
ONIVA01G42870
N
0.891
ONIVA12G03060
Oryza nivara
ONIVA12G03060
N
0.946
OPUNC01G36980
Oryza punctata
OPUNC01G36980
N
0.894
OPUNC12G03240
Oryza punctata
OPUNC12G03240
N
0.955
orange1.1g023996m.g
Citrus sinensis
orange1.1g023996m.g
N
0.958
orange1.1g039532m.g
Citrus sinensis
orange1.1g039532m.g
N
0.940
ORGLA01G0320200
Oryza glaberrima
ORGLA01G0320200
N
0.891
ORGLA12G0033100
Oryza glaberrima
ORGLA12G0033100
N
0.946
ORUFI01G41540
Oryza rufipogon
ORUFI01G41540
N
0.891
ORUFI11G03420
Oryza rufipogon
ORUFI11G03420
N
0.871
OS01G0862800
Oryza sativa
OS01G0862800
N
0.891
OS11G0154500
Oryza sativa
OS11G0154500
N
0.871
OS12G0156100
Oryza sativa
OS12G0156100
N
0.946
Pavir.Bb01366
Panicum virgatum
Pavir.Bb01366
N
0.902
Pavir.Ea03745
Panicum virgatum
Pavir.Ea03745
N
0.897
Pavir.Ha01768
Panicum virgatum
Pavir.Ha01768
N
0.892
Pavir.Hb01808
Panicum virgatum
Pavir.Hb01808
N
0.903
Pavir.J04751
Panicum virgatum
Pavir.J04751
N
0.912
Pavir.J13106
Panicum virgatum
Pavir.J13106
N
0.900
Pavir.J36282
Panicum virgatum
Pavir.J36282
N
0.927
PGSC0003DMG400026332
Solanum tuberosum
PGSC0003DMG400026332
N
0.960
PK27925.1
Cannabis sativa
PK27925.1
N
0.964
PK29014.1
Cannabis sativa
PK29014.1
N
0.962
Pm001403
Prunus mume
Pm001403
N
0.976
Pm001404
Prunus mume
Pm001404
N
0.912
POPTR_0001s22630
Populus trichocarpa
POPTR_0001s22630
N
0.944
POPTR_0006s22580
Populus trichocarpa
POPTR_0006s22580
N
0.941
POPTR_0009s02430
Populus trichocarpa
POPTR_0009s02430
N
0.916
POPTR_0016s07680
Populus trichocarpa
POPTR_0016s07680
N
0.930
POPTR_0016s07690
Populus trichocarpa
POPTR_0016s07690
N
0.925
PRUPE_ppa010337mg
Prunus persica
PRUPE_ppa010337mg
N
0.976
PRUPE_ppa025103mg
Prunus persica
PRUPE_ppa025103mg
N
0.960
SapurV1A.0450s0140
Salix purpurea
SapurV1A.0450s0140
N
0.937
SapurV1A.0630s0010
Salix purpurea
SapurV1A.0630s0010
N
0.913
SapurV1A.0768s0010
Salix purpurea
SapurV1A.0768s0010
N
0.901
SapurV1A.0974s0010
Salix purpurea
SapurV1A.0974s0010
N
0.921
SapurV1A.1671s0050
Salix purpurea
SapurV1A.1671s0050
N
0.937
Sb03g040720
Sorghum bicolor
Sb03g040720
N
0.913
Sb05g003400
Sorghum bicolor
Sb05g003400
N
0.929
Sb09g021780
Sorghum bicolor
Sb09g021780
N
0.922
Si002586m.g
Setaria italica
Si002586m.g
N
0.907
Si022966m.g
Setaria italica
Si022966m.g
N
0.909
Si025833m.g
Setaria italica
Si025833m.g
N
0.878
Si026707m.g
Setaria italica
Si026707m.g
N
0.925
Solyc09g010160.1
Solanum lycopersicum
Solyc09g010160.1
N
0.910
Solyc11g068620.1
Solanum lycopersicum
Solyc11g068620.1
N
0.959
TCM_022676
Theobroma cacao
TCM_022676
N
0.972
TCM_022690
Theobroma cacao
TCM_022690
N
0.937
TCM_041364
Theobroma cacao
TCM_041364
N
0.923
Thhalv10014563m.g
Eutrema salsugineum
Thhalv10014563m.g
N
0.931
TRAES3BF019300010CFD_g
Triticum aestivum
TRAES3BF019300010CFD_g
N
0.887
Traes_1AL_179FC28F2
Triticum aestivum
Traes_1AL_179FC28F2
N
0.898
Traes_1AL_C76BCC7EC
Triticum aestivum
Traes_1AL_C76BCC7EC
N
0.880
Traes_5DL_43FC1B296
Triticum aestivum
Traes_5DL_43FC1B296
N
0.894
TRIUR3_33275
Triticum urartu
TRIUR3_33275
N
0.889
VIT_06s0080g00780
Vitis vinifera
VIT_06s0080g00780
N
0.958
VIT_18s0041g00700
Vitis vinifera
VIT_18s0041g00700
N
0.972